FC930212

Overview
NameFC930212
Unique NameFC930212
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15118 contig Ccv1_Contig15118:1..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.025e-44
Identity = 87/165 (52.73%), Postives = 106/165 (64.24%), Query Frame = 1
Query:  148 QIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYKGRAPKGQKTNWVMHEYRL---EGKYSAYDHPKTAKNEWVICRVFQKSGGGKKHI 633
            ++ LP GFRFHPTDEEL+  YL  +      +   I E+DL K  PW+LP  A  GEKEWYFF  RDRKYP G R NRA   GYWKATG DK I K K L G+KK LVFY G+APKG KTNW+MHEYRL   +   S         ++WV+CR++ K G  +K++
Sbjct:   47 ELNLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTL-GIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEKYL 210          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC9_ARATH (Putative NAC domain-containing protein 9 OS=Arabidopsis thaliana GN=NAC009 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.714e-43
Identity = 84/168 (50.00%), Postives = 110/168 (65.48%), Query Frame = 1
Query:  136 DDQEQIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKA--LVGMKKTLVFYKGRAPKGQKTNWVMHEYRLEG-------KYSAYDHPKTAKNEWVICRVFQKS 612
            D + +  L PGFRFHPTDEEL++ YL  KV     S   I ++D+ K +PWDLP+ A  GEKEWYF+C RDRKY    R NR T AG+WKATG D+ IY ++    +G+KK+LVFYKGRA KG KT+W+MHE+RL             +D P +  + W ICR+F+K+
Sbjct:    9 DQKMEDVLLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLPKFAMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDSWAICRIFKKT 176          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC42_ARATH (NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.451e-42
Identity = 80/159 (50.31%), Postives = 107/159 (67.30%), Query Frame = 1
Query:  136 DDQEQIELP-PGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYKGRAPKGQKTNWVMHEYRLEGKYSAYDHPKTAKNEWVICRVFQK 609
            D +E+ E P PGFRFHPTDEEL+ +YL  KV +       I ++D+ K +PWDLPR + +GEKEWYFFC+R RKY   +R NR T +G+WKATG DK +Y     VG+KK+LV+Y G A KG KT+W+MHE+RL    +  D P      W +CR+F++
Sbjct:   10 DHEEENEAPLPGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPRVSSVGEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSNLDCVGLKKSLVYYLGSAGKGTKTDWMMHEFRLPST-TKTDSPAQQAEVWTLCRIFKR 167          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.222e-42
Identity = 89/197 (45.18%), Postives = 117/197 (59.39%), Query Frame = 1
Query:  124 MEKYDDQEQIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYK--AKALVGMKKTLVFYKGRAPKGQKTNWVMHEYRL-------EGKYSAYDHPKTAKNE------------WVICRVFQKSG--GGKKHIFKGW 645
            +E+YDD     + PGFRFHPTDEEL++ YL  KV         I +VD+ K +PWDLP+ A MGEKEWYF+C RDRKY    R NR T  G+WKATG D+ IY   +   +G+KK+LVFY+GRA KG KT+W+MHE+RL          Y  Y++ K   N             W ICR+F+K+     ++ I + W
Sbjct:   13 VERYDDV----VLPGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWDLPKLAAMGEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSNDAWAICRIFKKTNAVSSQRSIPQSW 205          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.222e-42
Identity = 82/165 (49.70%), Postives = 105/165 (63.64%), Query Frame = 1
Query:  148 QIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYK----AKALVGMKKTLVFYKGRAPKGQKTNWVMHEYRLEGKYSA----YDHPKTA--KNEWVICRVFQKS 612
            Q  LPPGFRFHPTDEEL+ HYL  K          I +VDL K +PW+LP +A  GE+EWYFF  RDRKYP G R NRA  +GYWKATG DK +          VG+KK LVFY G+ PKG K++W+MHEYRL          + + K +   ++WV+CR+++K+
Sbjct:   14 QPNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKN 178          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.831e-38
Identity = 74/154 (48.05%), Postives = 101/154 (65.58%), Query Frame = 1
Query:  157 LPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMG--EKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYKGRAPKGQKTNWVMHEYRLEGKYSAYDHPKTAKNEWVICRVFQKS 612
            LPPGF FHP D ELI+HYL  K+         I EVD+ K EPWDLP +  +   + +W+FF  RDRKYP G R+NRAT AGYWK+TGKD+ I   K  +G KKTLVF++GR P G++T W+MHEY ++ +          K+ +V+CR+ +++
Sbjct:    9 LPPGFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAKCDVPTQDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEGRPPTGRRTEWIMHEYYIDER--ECQACPDMKDAYVLCRITKRN 160          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.970e-24
Identity = 64/158 (40.51%), Postives = 90/158 (56.96%), Query Frame = 1
Query:  166 GFRFHPTDEELITHYLTPKVFDGCFSA-RAIGEVDLNKCEPWDLPRRAKMGEKE--WYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKAL---VGMKKTLVFYKGRAPKGQKTNWVMHEYRLEGKYSAYDHPKTAKNEWVICRVFQKSGGG 621
            G+RF+PT EELI HYL  K+    +    AI E+++   +P  LP  +K+   +  WYFFC ++        T R T +GYWKATG D++I   +     +G+KKTLV+Y+GR PKG  T WVMHEY +         P+  +N +VIC+V  K   G
Sbjct:    7 GYRFYPTGEELINHYLKNKILGKTWLVDEAISEINICSYDPIYLPSLSKIKSDDPVWYFFCPKEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVYYEGRVPKGVWTPWVMHEYHITCL------PQDQRN-YVICQVMYKGEDG 157          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC90_ARATH (NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.488e-23
Identity = 61/165 (36.97%), Postives = 96/165 (58.18%), Query Frame = 1
Query:  154 ELPPGFRFHPTDEELITHYLTPKVFDGCFSA--RAIGEVDLNKCEPWDLPR----RAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIY-KAKALVGMKKTLVFYKGRAPKGQKTNWVMHEYR-LEGKYSAYDHPKTAKNEWVICRVFQKSGGGK 624
            E+  GFRF+PT+EEL++ YL  ++      +  R I  +D+ + EP  LP     R +   ++W+FF  R  +   G R +R T +GYWKATG    ++ K   ++G KKT+VFY G+AP G+KT W M+EY  ++   +A   PK  + E+ +CRV+  +G  +
Sbjct:    4 EVTIGFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRGDAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTGKAPTGRKTKWKMNEYHAVDETVNASTIPK-LRREFSLCRVYITTGSSR 167          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC4_ARATH (NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22
Identity = 57/130 (43.85%), Postives = 76/130 (58.46%), Query Frame = 1
Query:  160 PPGFRFHPTDEELITHYLTPKVFDGCFSA--RAIGEVDLNKCEPWDLPRRAKMGEKE--WYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKA---LVGMKKTLVFYKGRAPKGQKTNWVMHEY 528
            P GFRF P DEE++ HYL PK  D   S     I  VD+   EPWDLP ++ +  ++  WYFF V++ KY  G +  R T +G+WK TGK   + + +     +G K+ LVF K R   G KT+WVMHEY
Sbjct:    4 PVGFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSKSMIKSRDGVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVF-KNR--DGSKTDWVMHEY 130          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC68_ARATH (NAC domain-containing protein 68 OS=Arabidopsis thaliana GN=NAC68 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.409e-21
Identity = 58/155 (37.42%), Postives = 92/155 (59.35%), Query Frame = 1
Query:  166 GFRFHPTDEELITHYLTPKVFDGCFSA-RAIGEVDLNKCEPW-DLPRRAKMGEK--EWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKA---LVGMKKTLVFYKGRAPKGQKTNWVMHEYRLEGKYSAYDHPKTAKNEWVICRVFQK 609
            G+RF PT EE+I HYL  K+    +    AI E+++   +P  DLP+ A++  +  EWYFF   +   P  ++  R T +G+WK TG D+EI   +    ++G+KKTLV+++G++P G +T WVMHEY +    +   H    K ++V+C+V  K
Sbjct:    7 GYRFSPTGEEVINHYLKNKLLGKYWLVDEAISEINILSHKPSKDLPKLARIQSEDLEWYFFSPIEYTNPNKMKMKRTTGSGFWKPTGVDREIRDKRGNGVVIGIKKTLVYHEGKSPHGVRTPWVMHEYHI----TCLPH---HKRKYVVCQVKYK 154          
The following BLAST results are available for this feature:
BLAST of FC930212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NA102_ARATH2.025e-4452.73NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC9_ARATH1.714e-4350.00Putative NAC domain-containing protein 9 OS=Arabid... [more]
NAC42_ARATH1.451e-4250.31NAC domain-containing protein 42 OS=Arabidopsis th... [more]
NAC94_ARATH4.222e-4245.18Putative NAC domain-containing protein 94 OS=Arabi... [more]
NAC18_ARATH4.222e-4249.70NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC74_ORYSJ4.831e-3848.05NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC69_ARATH3.970e-2440.51NAC domain-containing protein 69 OS=Arabidopsis th... [more]
NAC90_ARATH7.488e-2336.97NAC domain-containing protein 90 OS=Arabidopsis th... [more]
NAC4_ARATH1.277e-2243.85NAC domain-containing protein 4 OS=Arabidopsis tha... [more]
NAC68_ARATH2.409e-2137.42NAC domain-containing protein 68 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC34005A02EF PostHarvC1 Citrus clementina cDNA clone C34005A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930212 ID=FC930212; Name=FC930212; organism=Citrus clementina; type=EST; length=707bp
GTATTTAATTAGTTATACTCTTCACAAAACTTCCCTTTTCTCTTAAAGCC
TCATTATAAACAAGCTTTTCACTTCACAACTATTCTTCAGTTAAGCACTA
GTCATTCTTAGCTTCTTGCAGGAATGGAGAAATATGACGATCAAGAACAG
ATTGAATTGCCTCCAGGATTTCGGTTCCATCCCACGGATGAAGAGCTTAT
AACTCATTACTTAACACCAAAGGTTTTTGATGGTTGTTTTTCAGCTAGAG
CTATCGGTGAAGTTGATTTGAACAAGTGTGAGCCCTGGGATTTGCCTCGG
AGAGCTAAAATGGGTGAAAAGGAATGGTATTTTTTTTGTGTTAGGGACAG
AAAGTACCCAACTGGATTGAGAACAAATAGAGCTACTGAAGCAGGATACT
GGAAAGCCACAGGCAAAGATAAGGAGATTTACAAAGCAAAAGCACTTGTG
GGGATGAAGAAAACTTTGGTTTTTTACAAAGGAAGAGCCCCGAAAGGTCA
AAAAACCAACTGGGTCATGCATGAATATCGTTTAGAAGGCAAATATTCTG
CCTACGATCACCCCAAAACAGCCAAAAATGAGTGGGTGATTTGTAGGGTG
TTTCAAAAGAGTGGTGGAGGAAAGAAACACATATTCAAGGGATGGTGAAA
TTAGGCTCATTCGGGAACGGCATGGGCTCTTCTGCGTTGCCTCCATTGAT
GGATTCA
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