FC930213

Overview
NameFC930213
Unique NameFC930213
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930213 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.709e-24
Identity = 67/217 (30.88%), Postives = 118/217 (54.38%), Query Frame = 1
Query:   64 TLNPSFVRIQDERPKVA------YNEFSNEIPVISLAGIDDVGGK-RAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKF--DMSGGKKGGF--IVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIV---VKLLSKCPQPDLTLGLNA 672
            T+   ++R +DE   +        N    ++P I L  I+    K RA+  +K+ +A  DWG+  +V+HG+  +L+  + +    FF LP E+K K+  D + GK  G+   ++++  G++  +W +   +  YP+  RD S WP  P  ++E T EY+ QL  +A K+L+VLS  +GL++  L K    +++ ++   +    KCPQP+L LG+ A
Sbjct:   21 TIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQL--EWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEA 235          
BLAST of FC930213 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24
Identity = 70/208 (33.65%), Postives = 109/208 (52.40%), Query Frame = 1
Query:   64 TLNPSFVRIQDERPKVAYNE-FSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEV--VKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEALTKAC--VDMDQKIVVKLLSKCPQPDLTLGLNA 672
            T+   ++R + E+P V   +    ++PVI L   ++      E+   I EA  +WGIFQVV+HG+    I+ + ++  EFF LP +EK       G +G     + LQ E+   K W + + +  +PK + +Y+ WP+ P  + E  +EY+  L GV  KL E LS  +GLEK  L KA    D+   + +     CP+PDL LG+ A
Sbjct:   18 TIPSEYIRSESEQPAVTTMQGVVLQVPVIDLGSSNNTEENLVEL---IAEASREWGIFQVVNHGIPDDAIAKLQKVGKEFFELPQQEKEVIAKPEGYQGVEGYGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKHELKKASGGDDLIYMLKINYYPPCPRPDLALGVVA 222          
BLAST of FC930213 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.447e-23
Identity = 67/218 (30.73%), Postives = 112/218 (51.38%), Query Frame = 1
Query:   64 TLNPSFVRIQDERPKVAYNEFSNE-------IPVISLAGIDDVGGKRAEIC-KKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKF--DMSGGKKGGF--IVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEALTK---ACVDMDQKIVVKLLSKCPQPDLTLGLNA 672
            T+   +VR ++E   +  N  + E       +P I L  +D    +  + C +++ +A  DWG+  +++HG+  +LI  +     EFF LP EEK  +  D + G   G+   ++++  G++  +W +   +  YP+   D S WP KP  ++  T EY+ QL  +A K+L VLS  +GLEK  L K      D+  ++ +    KCPQP+L LG  A
Sbjct:   22 TIPKDYVRPEEELKSIIGNILAEEKSSEGPQLPTIDLEEMDSRDEEGRKKCHEELKKAATDWGVMHLINHGIPEELIDRVKAAGKEFFELPVEEKEAYANDQAAGNVQGYGSKLANNASGQL--EWEDYFFHCVYPEHKTDLSIWPTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEA 237          
BLAST of FC930213 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.890e-23
Identity = 60/188 (31.91%), Postives = 107/188 (56.91%), Query Frame = 1
Query:  133 EIPVISLAGIDDVGGKRAEIC-KKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKF--DMSGGKKGGF--IVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIV---VKLLSKCPQPDLTLGLNA 672
            ++P I L  I+    K  E C +++ +A  DWG+  +++HG+ A L+  + +   EFF+L  EEK K+  D + GK  G+   ++++  G++  +W +   + +YP++ RD S WP  P  ++E T EY+  L  +A K+ + LS  +GLE + L K    +++ ++   +    KCPQP+L LG+ A
Sbjct:   46 QVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQL--EWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEA 231          
BLAST of FC930213 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.181e-23
Identity = 71/237 (29.96%), Postives = 120/237 (50.63%), Query Frame = 1
Query:   10 VDHQLMAPSTLTALAAE--KTLNPSFVRIQDERPKVAYNEFSNE-------IPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKF--DMSGGKKGGF--IVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIV---VKLLSKCPQPDLTLGLNA 672
            V+  +  PS + +LA    + +   +VR Q+E   +  N F  E       +P I L  ID    +  E C ++ +A  +WG+  +V+HG+  +LI+ +      FF  P EEK K+  D + G   G+   +++   G++  +W +   + ++P+  RD S WP  P  +   T EY+ Q+  +A K+L VLS  +GLE+  L K    M+  ++   +    KCPQP+L LG+ A
Sbjct:    2 VNAVVTTPSRVESLAKSGIQAIPKEYVRPQEELNGIG-NIFEEEKKDEGPQVPTIDLKEIDSEDKEIREKCHQLKKAAMEWGVMHLVNHGISDELINRVKVAGETFFDQPVEEKEKYANDQANGNVQGYGSKLANSACGQL--EWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEA 235          
BLAST of FC930213 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.079e-22
Identity = 64/222 (28.83%), Postives = 116/222 (52.25%), Query Frame = 1
Query:   61 KTLNPSFVRIQDERPKVAY---NEFSNEIPVISLAGIDDVGGKRAEICKKIVEACED--------WGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKF--DMSGGKKGGF--IVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVKLLS---KCPQPDLTLGLNA 672
            +++   ++R Q+E   +      E  +E P +    + D+  +   + ++I E C +        WG+  +V+HG+   LI+ +      FF LP EEK K+  D + GK  G+   ++++  G++  +W +   +  +P+  RD + WP  P  ++  T EYS +L  +A K+L VLS  +GLE+  L K    M++ ++ K ++   KCPQP+L LG+ A
Sbjct:   18 QSIPKEYIRPQEELTSIGNVFEEEKKDEGPQVPTIDLKDIESEDEVVRREIRERCREELKKAAMEWGVMHLVNHGISDDLINRVKVAGETFFNLPMEEKEKYANDQASGKIAGYGSKLANNASGQL--EWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKINYYPKCPQPELALGVEA 237          
BLAST of FC930213 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21
Identity = 64/209 (30.62%), Postives = 111/209 (53.11%), Query Frame = 1
Query:   64 TLNPSFVRIQDERPKVAYNE-FSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFF-ALPPEEKLKFDMSGGKKG--GFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVKL--LSKCPQPDLTLGLNA 672
            T+   ++R ++E+P     +    E+PVI ++ +DD      ++ K+IVEA ++WGIFQV++HG+  ++I ++ ++  EFF  +P EEK       G +   G+  S   + E  K W + + +  +P  + +Y  WP  P  + E  +EY+  L  VA  +   LS  +GLE   + +A    D   ++K+     CP+PDL LG+ A
Sbjct:   32 TIPSEYIRSENEQPAATTLQGVVLEVPVIDISNVDD---DEEKLVKEIVEASKEWGIFQVINHGIPDEVIENLQKVGKEFFEEVPQEEKELIAKKPGAQSLEGYGTSLQKEIEGKKGWVDHLFHKIWPPSAINYRYWPKNPPSYREANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAAGSEDIVYMLKINYYPPCPRPDLALGVVA 237          
BLAST of FC930213 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.769e-21
Identity = 69/208 (33.17%), Postives = 103/208 (49.52%), Query Frame = 1
Query:   64 TLNPSFVRIQDERP-KVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEV--VKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEALTKAC--VDMDQKIVVKLLSKCPQPDLTLGLNA 672
            T+   F+R + E+P    Y+  + EIP I L   DD    R  + + I EA  +WGIFQV +HG+ + LI  +  +  EFF LP EEK  +      K      + LQ EV   K W + + +  +P  S +Y  WP  P  +  V +EY+  +  V  KL   LS  +G+E   L +A    D++  + +     CP+PDL LG+ A
Sbjct:   18 TIPAEFIRPEKEQPASTTYHGPAPEIPTIDL---DDPVQDR--LVRSIAEASREWGIFQVTNHGIPSDLICKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPKNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGVEGGVLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVA 220          
BLAST of FC930213 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.431e-20
Identity = 61/203 (30.05%), Postives = 106/203 (52.22%), Query Frame = 1
Query:   79 FVRIQDERPKVA-YNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKG--GFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVKL--LSKCPQPDLTLGLNA 672
            F+R + E+P +  +   +  IPV+ L+  D+   +RA     +V+A E+WG+FQVV+HG+  +LI  +  +  +FF LP  EK         K   G+        E  K W + + +  +P    +Y  WP  P  + EV +EY+  +  ++  LL +LS+ +GL+++AL +       + ++K+     CP+PDL LG+ A
Sbjct:   23 FIRSEKEQPAITTFRGPTPAIPVVDLSDPDEESVRRA-----VVKASEEWGLFQVVNHGIPTELIRRLQDVGRKFFELPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDALKEGLGGEMAEYMMKINYYPPCPRPDLALGVPA 220          
BLAST of FC930213 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.291e-19
Identity = 62/209 (29.67%), Postives = 104/209 (49.76%), Query Frame = 1
Query:   64 TLNPSFVRIQDERPKVA-YNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEV--VKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVKL--LSKCPQPDLTLGLNAT 675
            T+   ++R ++E+P ++  +    E+PVI L+  D+      +I   + EA ++WGIFQVV+HG+  ++I  +  +   FF LP EEK       G +      + LQ EV   K W + + +  +P  + +Y  WP  P  + E  +EY+ +L  V   L + LS  + LE  +        D   ++K+     CP+PDL LG+  T
Sbjct:   18 TIPAEYIRSENEQPVISTVHGVVLEVPVIDLSDSDE-----KKIVGLVSEASKEWGIFQVVNHGIPNEVIRKLQEVGKHFFELPQEEKELIAKPEGSQSIEGYGTRLQKEVDGKKGWVDHLFHKIWPPSAINYQFWPKNPPAYREANEEYAKRLQLVVDNLFKYLSLGLDLEPNSFKDGAGGDDLVYLMKINYYPPCPRPDLALGVAHT 221          
The following BLAST results are available for this feature:
BLAST of FC930213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
LDOX_MALDO1.709e-2430.88Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
FLS_PETCR3.808e-2433.65Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
LDOX_PERFR1.447e-2330.73Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
LDOX_ARATH1.890e-2331.91Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_PETHY7.181e-2329.96Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_VITVI6.079e-2228.83Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
FLS_SOLTU1.354e-2130.62Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
FLS_CITUN1.769e-2133.17Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
FLS1_ARATH7.431e-2030.05Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
FLS_EUSGR6.291e-1929.67Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]

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Properties
Property NameValue
Genbank descriptionC34005A03EF PostHarvC1 Citrus clementina cDNA clone C34005A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930213 ID=FC930213; Name=FC930213; organism=Citrus clementina; type=EST; length=691bp
TTGTGCTTCGTTGATCATCAATTAATGGCTCCTTCAACCCTCACCGCCCT
TGCTGCGGAGAAAACCCTCAACCCAAGCTTTGTCCGCATTCAAGATGAGC
GTCCCAAGGTGGCTTATAATGAATTCAGCAATGAAATTCCTGTGATTTCA
CTTGCTGGGATCGATGACGTCGGTGGCAAAAGGGCTGAGATTTGCAAGAA
AATTGTTGAGGCGTGTGAGGACTGGGGAATCTTTCAAGTTGTTGATCATG
GTGTTGATGCTAAGCTTATATCCGATATGACTCGTCTTGCTACAGAATTT
TTCGCCCTGCCCCCTGAGGAGAAGCTCAAGTTTGATATGTCCGGTGGGAA
GAAGGGTGGCTTCATTGTCTCCAGCCACCTTCAGGGTGAAGTAGTAAAAG
ATTGGCGTGAAATAGTGACGTATTTTTCATACCCAAAGCAAAGCCGAGAC
TACTCTCGTTGGCCGGACAAGCCAGAAGGGTGGATGGAAGTAACAAAAGA
ATACAGTGACCAATTAATGGGAGTGGCGTGCAAGCTTCTAGAAGTTTTAT
CAGAGGCAATGGGATTGGAGAAGGAAGCTTTGACTAAAGCATGTGTGGAC
ATGGACCAAAAGATTGTTGTCAAATTACTATCCAAATGCCCACAACCCGA
CCTCACTCTCGGACTCAACGCCACACGGATCCGGGAACATC
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