FC930219

Overview
NameFC930219
Unique NameFC930219
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 1.204e-75
Identity = 118/169 (69.82%), Postives = 125/169 (73.96%), Query Frame = 1
Query:   88 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGY 594
            M KDVE          F  +DY DPPP P  D +EL +WS YRAVIAEF+A            IGYK Q+D       CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSLIRA+LYMVAQCLGAICG GFVKAFQ SYY+RYGGGAN LADGY
Sbjct:    1 MAKDVE------GPEGFQTRDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSYYDRYGGGANSLADGY 163          

HSP 2 Score: 67.781 bits (164), Expect = 1.204e-75
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 3
Query:  600 GTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVP 701
            GTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVP
Sbjct:  166 GTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVP 199          
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.570e-75
Identity = 114/173 (65.90%), Postives = 131/173 (75.72%), Query Frame = 1
Query:   88 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYTR 600
            MGK+ +V            +DY DPPPAPL+D +ELGRWS YRAVIAEF+A            IGYK QTD + + D   CGGVG+LGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSL+RA+LY+VAQCLGA+CG   VK FQ S+Y+RYGGGANELA GY++
Sbjct:    1 MGKEADVEAG-------GVRDYEDPPPAPLVDIDELGRWSLYRAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSK 166          

HSP 2 Score: 69.707 bits (169), Expect = 1.570e-75
Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 3
Query:  597 KGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVP 701
            KGTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVP
Sbjct:  166 KGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVP 200          
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 5.924e-75
Identity = 116/173 (67.05%), Postives = 130/173 (75.14%), Query Frame = 1
Query:   88 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYTR 600
            M KD+E A        + AKDY DPPPAPLID EEL +WS YRAVIAEF+A            IGYK Q+DP  N     C GVGILGIAWAFGGMIFILVYCTAG+SGGHINPAVTFGLFL RKVSL+RA+LY+VAQ LGAICG G VK FQ ++Y RYGGGANEL+DGY++
Sbjct:    1 MAKDIEAAAAAEGGE-YMAKDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSK 172          

HSP 2 Score: 69.707 bits (169), Expect = 5.924e-75
Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 3
Query:  597 KGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVP 701
            KGTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVP
Sbjct:  172 KGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVP 206          
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 4.960e-74
Identity = 117/169 (69.23%), Postives = 123/169 (72.78%), Query Frame = 1
Query:   88 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGY 594
            M KDVE          F  +DY DPPP P  D EEL +WS YRAVIAEF+A            IGYK Q+D       CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSLIRA+LYMVAQCLGAICG GFVKAFQ S+Y  YGGGAN LADGY
Sbjct:    1 MAKDVE------GPDGFQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGGGANFLADGY 163          

HSP 2 Score: 67.781 bits (164), Expect = 4.960e-74
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 3
Query:  600 GTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVP 701
            GTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVP
Sbjct:  166 GTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVP 199          
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 8.436e-74
Identity = 114/173 (65.90%), Postives = 128/173 (73.99%), Query Frame = 1
Query:   88 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYTR 600
            M KD+E A           KDY DPPPAPL+D EEL +WS YRAVIAEF+A            IGYK QTD   +     CGGVG+LGIAWAFGGMIFILVYCTAG+SGGHINPAVTFGLFL RKVSL+RALLY+VAQCLGAICG G VK FQ ++Y RYGGGANEL+ GY++
Sbjct:    1 MAKDIEAAAAH------EGKDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSK 167          

HSP 2 Score: 69.707 bits (169), Expect = 8.436e-74
Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 3
Query:  597 KGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVP 701
            KGTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVP
Sbjct:  167 KGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVP 201          
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 2.441e-73
Identity = 114/172 (66.28%), Postives = 129/172 (75.00%), Query Frame = 1
Query:   88 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYT 597
            MGK+V+V+          A+DY DPPPAPL+D +ELG+WS YRA+IAEF+A            IGYK QTD  +N     CGGVG+LGIAWAFGGMIFILVYCTAG+SGGHINPAVT GLFL RKVSL+RALLYM AQCLGAICG   VK FQ S Y+RYGGGANELA GY+
Sbjct:    1 MGKEVDVSTLEAG----GARDYIDPPPAPLVDVDELGKWSLYRALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYS 168          

HSP 2 Score: 67.781 bits (164), Expect = 2.441e-73
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 3
Query:  600 GTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVP 701
            GTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVP
Sbjct:  170 GTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVP 203          
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 6.449e-71
Identity = 112/172 (65.12%), Postives = 126/172 (73.26%), Query Frame = 1
Query:   88 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYT 597
            MGK+V+V+           +DY DPPPAPLID +ELG+WS YRAVIAEF+A            IGYK QTD + +     C GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSL+RALLYM AQ LGAICG   VK FQ  +Y RYGGGANE++ GY+
Sbjct:    1 MGKEVDVSTLEAGGVR--DRDYADPPPAPLIDIDELGKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYS 170          

HSP 2 Score: 67.781 bits (164), Expect = 6.449e-71
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 3
Query:  600 GTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVP 701
            GTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVP
Sbjct:  172 GTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVP 205          
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 1.097e-70
Identity = 107/152 (70.39%), Postives = 118/152 (77.63%), Query Frame = 1
Query:  145 KDYHDPPPAPLIDFEELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYTR 600
            KDY DPPPAPL+D  EL  WSFYRA+IAEFIA            IG+K QT P      C GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL+RAL YM+AQCLGAICG GFVKAF K+ YN  GGGAN +ADGY++
Sbjct:   15 KDYVDPPPAPLLDMGELKSWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGP------CDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSK 160          

HSP 2 Score: 70.4774 bits (171), Expect = 1.097e-70
Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 3
Query:  597 KGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVP 701
            KGT LGAEIIGTFVLVYTVFSATDPKRSARDSH+P
Sbjct:  160 KGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIP 194          
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 1.561e-69
Identity = 105/152 (69.08%), Postives = 114/152 (75.00%), Query Frame = 1
Query:  139 SAKDYHDPPPAPLIDFEELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGY 594
            S KDY DPPP    +  EL +WSFYRAVIAEFIA            IG+KSQTD N     C  VG+LGI+WAFGGMIFILVYCTAGISGGHINPAVTFGLFL  KVSL+RA+ YMVAQCLGA CG G VK FQ +YYNRYGGGAN L+DGY
Sbjct:   13 SGKDYLDPPPVKTFEVRELKKWSFYRAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGY 164          

HSP 2 Score: 66.6254 bits (161), Expect = 1.561e-69
Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 3
Query:  600 GTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVP 701
            G G+GAEIIGTFVLVYTVFSATDPKR+ARDSH+P
Sbjct:  167 GVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIP 200          
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.462e-69
Identity = 106/151 (70.20%), Postives = 116/151 (76.82%), Query Frame = 1
Query:  145 KDYHDPPPAPLIDFEELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYT 597
            KDY DPPPAPL+D  EL  WSFYRA+IAEFIA            IG+K+QT P      CGGVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL RA+ YMVAQCLGAICG G VKAF  + Y R GGGAN +ADGY+
Sbjct:   13 KDYVDPPPAPLLDMAELKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQTGP------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYS 157          

HSP 2 Score: 68.9366 bits (167), Expect = 3.462e-69
Identity = 33/34 (97.06%), Postives = 33/34 (97.06%), Query Frame = 3
Query:  600 GTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVP 701
            GT LGAEIIGTFVLVYTVFSATDPKRSARDSHVP
Sbjct:  159 GTALGAEIIGTFVLVYTVFSATDPKRSARDSHVP 192          
The following BLAST results are available for this feature:
BLAST of FC930219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PIP22_ARATH1.204e-7569.82Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP25_ORYSJ1.570e-7565.90Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP23_ORYSJ5.924e-7567.05Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP23_ARATH4.960e-7469.23Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP25_MAIZE8.436e-7465.90Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP24_ORYSJ2.441e-7366.28Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP26_MAIZE6.449e-7165.12Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP27_ARATH1.097e-7070.39Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP26_ARATH1.561e-6969.08Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP28_ARATH3.462e-6970.20Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC34005A09EF PostHarvC1 Citrus clementina cDNA clone C34005A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930219 ID=FC930219; Name=FC930219; organism=Citrus clementina; type=EST; length=702bp
CATCATTAAACTCTGTAGCAACACAACAGTCGTAGCTCTTGTTTCTCCCT
CTCGTTTAATTAACAAAACAAAAATAAAAGGGAAAAAATGGGGAAGGATG
TTGAAGTTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAGCCAAGGAC
TACCACGACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAG
GTGGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGT
TTCTTTATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGAT
CCCAACTTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGC
TTGGGCCTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTA
TTTCTGGTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGG
CGCAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTT
GGGTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACT
ACAACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACACAAGG
GCACCGGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACACT
GTTTTCTCTGCCACTGATCCTAAGAGGAGCGCAAGAGACTCCCATGTTCC
GG
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