FC930219

Overview
NameFC930219
Unique NameFC930219
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 1.331e-17
Identity = 47/128 (36.72%), Postives = 65/128 (50.78%), Query Frame = 1 
Query:  208 FYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADG 591
            F+RAV+AEF+A            +G+K     N    Q      + ++ AFG  I  L      ISG H+NPAVT GL L  ++S+ RAL+Y++AQC+GAI     +     S       G N+LADG
Sbjct:   10 FWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDN----VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGN-SLGRNDLADG 132

HSP 2 Score: 32.7278 bits (73), Expect = 1.331e-17
Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = 3 
Query:  591 IHKGTGLGAEIIGTFVLVYTVFSATDPKR 677
            ++ G GLG EIIGT  LV  V + TD +R
Sbjct:  133 VNSGQGLGIEIIGTLQLVLCVLATTDRRR 161
[Close]
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 1.730e-17
Identity = 47/128 (36.72%), Postives = 65/128 (50.78%), Query Frame = 1 
Query:  208 FYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADG 591
            F+RAV+AEF+A            +G+K     N    Q      + ++ AFG  I  L      ISG H+NPAVT GL L  ++S+ RAL+Y++AQC+GAI     +     S       G N+LADG
Sbjct:   10 FWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDN----VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGN-SLGRNDLADG 132

HSP 2 Score: 32.7278 bits (73), Expect = 1.730e-17
Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = 3 
Query:  591 IHKGTGLGAEIIGTFVLVYTVFSATDPKR 677
            ++ G GLG EIIGT  LV  V + TD +R
Sbjct:  133 VNSGQGLGIEIIGTLQLVLCVLATTDRRR 161
[Close]
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 1.086e-16
Identity = 45/134 (33.58%), Postives = 69/134 (51.49%), Query Frame = 1 
Query:  190 ELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADG 591
            E+ +  F+RAV+AEF+A            +G+    + N    Q      + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S  +    G N+LA G
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDN----VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDN-SLGRNDLAHG 132

HSP 2 Score: 32.7278 bits (73), Expect = 1.086e-16
Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = 3 
Query:  591 IHKGTGLGAEIIGTFVLVYTVFSATDPKR 677
            ++ G GLG EIIGT  LV  V + TD +R
Sbjct:  133 VNSGQGLGIEIIGTLQLVLCVLATTDRRR 161
[Close]
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 73.9442 bits (180), Expect = 1.835e-16
Identity = 45/134 (33.58%), Postives = 68/134 (50.75%), Query Frame = 1 
Query:  190 ELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADG 591
            E+ +  F+RAV+AEF+A            +G+    + N    Q      + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S       G N+LA G
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDN----VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLEN-SLGRNDLARG 132

HSP 2 Score: 32.7278 bits (73), Expect = 1.835e-16
Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = 3 
Query:  591 IHKGTGLGAEIIGTFVLVYTVFSATDPKR 677
            ++ G GLG EIIGT  LV  V + TD +R
Sbjct:  133 VNSGQGLGIEIIGTLQLVLCVLATTDRRR 161
[Close]
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 2.384e-16
Identity = 46/129 (35.66%), Postives = 66/129 (51.16%), Query Frame = 1 
Query:  208 FYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGV-GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADG 591
            F+RAV+AEF+A            +G+     P  N    G     + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S  +    G NELA G
Sbjct:   10 FWRAVVAEFLAMILFVFISIGSALGFNY---PVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDN-SLGRNELAPG 134

HSP 2 Score: 32.7278 bits (73), Expect = 2.384e-16
Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = 3 
Query:  591 IHKGTGLGAEIIGTFVLVYTVFSATDPKR 677
            ++ G GLG EIIGT  LV  V + TD +R
Sbjct:  135 VNSGQGLGIEIIGTLQLVLCVLATTDRRR 163
[Close]
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 8.846e-16
Identity = 46/129 (35.66%), Postives = 66/129 (51.16%), Query Frame = 1 
Query:  208 FYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGV-GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADG 591
            F+RAV+AEF+A            +G+      N  T   G V   + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S  +    G N LA G
Sbjct:   10 FWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTT---GAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDN-SLGLNALAPG 134

HSP 2 Score: 32.7278 bits (73), Expect = 8.846e-16
Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = 3 
Query:  591 IHKGTGLGAEIIGTFVLVYTVFSATDPKR 677
            ++ G GLG EIIGT  LV  V + TD +R
Sbjct:  135 VNSGQGLGIEIIGTLQLVLCVLATTDRRR 163
[Close]
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 1.494e-15
Identity = 46/129 (35.66%), Postives = 66/129 (51.16%), Query Frame = 1 
Query:  208 FYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGV-GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADG 591
            F+RAV+AEF+A            +G+      N  T   G V   + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S  +    G N LA G
Sbjct:   10 FWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTT---GAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDN-SLGLNALAPG 134

HSP 2 Score: 32.7278 bits (73), Expect = 1.494e-15
Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = 3 
Query:  591 IHKGTGLGAEIIGTFVLVYTVFSATDPKR 677
            ++ G GLG EIIGT  LV  V + TD +R
Sbjct:  135 VNSGQGLGIEIIGTLQLVLCVLATTDRRR 163
[Close]
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 2.524e-15
Identity = 45/129 (34.88%), Postives = 65/129 (50.39%), Query Frame = 1 
Query:  208 FYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGV-GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADG 591
            F+RAV+AEF+A            +G++    P  N    G     + ++ AFG  I  L      ISG H+NPAVT GL L  ++S++RA++Y++AQC+GAI     +     S       G N LA G
Sbjct:   10 FWRAVVAEFLAMTLFIFISIGSALGFQY---PVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGN-SLGLNSLAPG 134

HSP 2 Score: 31.9574 bits (71), Expect = 2.524e-15
Identity = 15/29 (51.72%), Postives = 18/29 (62.07%), Query Frame = 3 
Query:  591 IHKGTGLGAEIIGTFVLVYTVFSATDPKR 677
            +  G GLG EIIGT  LV  V + TD +R
Sbjct:  135 VDSGQGLGIEIIGTLQLVLCVLATTDRRR 163
[Close]
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.530e-15
Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = 1 
Query:  187 EELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGC 519
            EE+   +  RA +AEFI+            I +   TD    T    G+    +A AFG  +F+ V   A ISGGH+NPAVTFG+ LG  ++L+R +LY +AQ LG++  C
Sbjct:   13 EEVYHPNALRAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPS--GLVAAALAHAFG--LFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAAC 119

HSP 2 Score: 26.9498 bits (58), Expect = 2.530e-15
Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 3 
Query:  618 EIIGTFVLVYTVF-SATDPKRSARDSHVP 701
            EI+ TF LVYTV+ +A DPK  +  +  P
Sbjct:  149 EIVMTFGLVYTVYATAVDPKNGSLGTIAP 177
[Close]
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.219e-14
Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 1 
Query:  187 EELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVK 531
            +E  R    +A +AEFI+            + +   T+    T    G+    +A AFG  +F+ V   A ISGGH+NPAVTFG F+G  ++L+R +LY +AQ LG++  C  +K
Sbjct:   12 DEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPS--GLVAAAVAHAFG--LFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILK 122

HSP 2 Score: 26.5646 bits (57), Expect = 1.219e-14
Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 3 
Query:  618 EIIGTFVLVYTVF-SATDPKRSARDSHVP 701
            EI+ TF LVYTV+ +A DPK  +  +  P
Sbjct:  148 EIVMTFGLVYTVYATAIDPKNGSLGTIAP 176
The following BLAST results are available for this feature:
BLAST of FC930219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
AQP1_HUMAN1.331e-1736.72Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_PONAB1.730e-1736.72Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE1.086e-1633.58Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_RAT1.835e-1633.58Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_CANFA2.384e-1635.66Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN8.846e-1635.66Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP1.494e-1535.66Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_PIG2.524e-1534.88Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
TIP12_ARATH2.530e-1538.74Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
TIP11_ARATH1.219e-1435.65Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]

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Properties
Property NameValue
Genbank descriptionC34005A09EF PostHarvC1 Citrus clementina cDNA clone C34005A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930219 ID=FC930219; Name=FC930219; organism=Citrus clementina; type=EST; length=702bp
CATCATTAAACTCTGTAGCAACACAACAGTCGTAGCTCTTGTTTCTCCCT
CTCGTTTAATTAACAAAACAAAAATAAAAGGGAAAAAATGGGGAAGGATG
TTGAAGTTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAGCCAAGGAC
TACCACGACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAG
GTGGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGT
TTCTTTATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGAT
CCCAACTTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGC
TTGGGCCTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTA
TTTCTGGTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGG
CGCAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTT
GGGTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACT
ACAACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACACAAGG
GCACCGGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACACT
GTTTTCTCTGCCACTGATCCTAAGAGGAGCGCAAGAGACTCCCATGTTCC
GG
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