FC930219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11 Identity = 43/109 (39.45%), Postives = 59/109 (54.13%), Query Frame = 1 Query: 190 ELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICG 516 EL SF+RA+ AEF A +G + P G + +L +A AFG + LV ISG H+NPAVTF +G ++SL+RA+ Y+VAQ LGA+ G Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAG 100
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11 Identity = 43/109 (39.45%), Postives = 58/109 (53.21%), Query Frame = 1 Query: 190 ELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICG 516 EL SF+RA+ AEF A +G + P G + +L +A AFG + LV ISG H+NPAVTF +G ++SL+RA+ YM AQ LGA+ G Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAG 100
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 43/109 (39.45%), Postives = 57/109 (52.29%), Query Frame = 1 Query: 190 ELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICG 516 EL SF+RA+ AEF A +G + P G + +L +A AFG + LV ISG H+NPAVTF +G ++SL+RA YM AQ LGA+ G Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWTP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAG 100
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 40/118 (33.90%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 175 LIDFEELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFV 528 ++ F+ + +F++AV AEF+A I + P V ++ I+ FG I +V C ISGGHINPAVT + R++S+ +++ Y+ AQCLGAI G G + Sbjct: 23 MVAFKGVWTQTFWKAVTAEFLAMLIFVLLSLGSTINWGGAEKPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGIL 133
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2) HSP 1 Score: 60.8474 bits (146), Expect = 2.396e-11 Identity = 35/99 (35.35%), Postives = 54/99 (54.55%), Query Frame = 1 Query: 214 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAI 510 +A +AEFI+ I Y T+ T G++ + A +F+ V A ISGGH+NPAV FG F+G ++L+R ++Y++AQ LG+I Sbjct: 21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATP----AGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSI 114 HSP 2 Score: 28.4906 bits (62), Expect = 2.396e-11 Identity = 15/27 (55.56%), Postives = 19/27 (70.37%), Query Frame = 3 Query: 600 GTGLGAEIIGTFVLVYTVF-SATDPKR 677 G L EI+ TF LVYTV+ +A DPK+ Sbjct: 140 GPALVLEIVMTFGLVYTVYATAVDPKK 166
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11 Identity = 43/109 (39.45%), Postives = 57/109 (52.29%), Query Frame = 1 Query: 190 ELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICG 516 EL SF+RA+ AEF A +G + P G + +L +A AFG + LV ISG H+NPAVTF +G ++SL+RA YM AQ LGA+ G Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGSSLRWAP-------GPLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAG 100
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11 Identity = 43/109 (39.45%), Postives = 57/109 (52.29%), Query Frame = 1 Query: 190 ELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICG 516 EL SF+RA+ AEF A +G + P G + +L +A AFG + LV ISG H+NPAVTF +G ++SL+RA YM AQ LGA+ G Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAG 100
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2) HSP 1 Score: 60.077 bits (144), Expect = 6.788e-11 Identity = 37/100 (37.00%), Postives = 53/100 (53.00%), Query Frame = 1 Query: 214 RAVIAEFIAXXXXXXXXXXXXIG-YKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAI 510 RA ++EF+A G +K D T GG+ ++ +A A + V + SGGH+NPAVTFG+ +GR++S RA LY AQ LGA+ Sbjct: 29 RAALSEFVATAVFVFAAEGSVYGLWKMYRD----TGTLGGLLVVAVAHALA--LAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAV 122 HSP 2 Score: 27.7202 bits (60), Expect = 6.788e-11 Identity = 14/37 (37.84%), Postives = 20/37 (54.05%), Query Frame = 3 Query: 591 IHKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVP 701 IH+ L E++ TF LVYTV++ +RS P Sbjct: 146 IHERHALLLEVVMTFGLVYTVYATAVDRRSGGGDIAP 182
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 44/111 (39.64%), Postives = 58/111 (52.25%), Query Frame = 1 Query: 190 ELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCG 522 EL SF+RA++AEF+ +G + P G G+LG A AFG LV +SGGHINPA+T L ++SL RAL Y++AQ LGA+ G G Sbjct: 3 ELRSSSFWRAILAEFLGSLLYTLLG----LGASLRWAP-------GPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAG 102 The following BLAST results are available for this feature:
BLAST of FC930219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930219 ID=FC930219; Name=FC930219; organism=Citrus clementina; type=EST; length=702bpback to top |