FC930221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPP_LEPIN (ATP-dependent Clp protease proteolytic subunit OS=Leptospira interrogans GN=clpP PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.767e-12 Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = 1 Query: 310 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 VIP+ T+ + D+ S L K+RI++LG + +I A+ L+L+ E+ E+ IYLY+NS G GY + AIYD M Y+KP + TLC+G Sbjct: 3 VIPYVIEQTSRGERSYDIFSRLLKDRIIFLGNAINDDYANVITAQLLFLEAENPERDIYLYLNSPG--------GYVSSGLAIYDTMQYIKPDVRTLCLG 94
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPP_CAMHC (ATP-dependent Clp protease proteolytic subunit OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=clpP PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.767e-12 Identity = 36/84 (42.86%), Postives = 49/84 (58.33%), Query Frame = 1 Query: 355 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 D+ S L K+RIV L V ++A+ L+L+ ED +K IYLYINS G G T F+IYD M Y+KP + T+C+G Sbjct: 18 DIYSRLLKDRIVMLSGEINDEVASSVVAQLLFLEAEDPDKDIYLYINSPG--------GVVTSGFSIYDTMNYIKPAVSTICIG 93
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPP1_LEPIC (ATP-dependent Clp protease proteolytic subunit 1 OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=clpP1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.767e-12 Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = 1 Query: 310 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 VIP+ T+ + D+ S L K+RI++LG + +I A+ L+L+ E+ E+ IYLY+NS G GY + AIYD M Y+KP + TLC+G Sbjct: 3 VIPYVIEQTSRGERSYDIFSRLLKDRIIFLGNAINDDYANVITAQLLFLEAENPERDIYLYLNSPG--------GYVSSGLAIYDTMQYIKPDVRTLCLG 94
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPP_THESQ (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga sp. (strain RQ2) GN=clpP PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.145e-11 Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 1 Query: 355 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 D+ S L K+RIV+LG V L++A+ L+L+ ED +K +YLYINS G G T AIYD M Y+K + T+CVG Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG--------GSVTAGLAIYDTMQYIKCDVSTICVG 103
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPP_THEP1 (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=clpP PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.145e-11 Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 1 Query: 355 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 D+ S L K+RIV+LG V L++A+ L+L+ ED +K +YLYINS G G T AIYD M Y+K + T+CVG Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG--------GSVTAGLAIYDTMQYIKCDVSTICVG 103
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPP_THEMA (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga maritima GN=clpP PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.145e-11 Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 1 Query: 355 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 D+ S L K+RIV+LG V L++A+ L+L+ ED +K +YLYINS G G T AIYD M Y+K + T+CVG Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG--------GSVTAGLAIYDTMQYIKCDVSTICVG 103
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPP_HALOH (ATP-dependent Clp protease proteolytic subunit OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=clpP PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.145e-11 Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 1 Query: 355 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 D+ S L K+RIV+LG ++ LI+A+ L+L+ ED +K I+LYINS G G T A A+YD + Y+KP + T+C+G Sbjct: 19 DIYSRLLKDRIVFLGHPINDELSNLIIAQLLFLEAEDPDKDIHLYINSPG--------GSVTAALAMYDTIQYIKPDVATICMG 94
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPP_ANADF (ATP-dependent Clp protease proteolytic subunit OS=Anaeromyxobacter sp. (strain Fw109-5) GN=clpP PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.145e-11 Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 1 Query: 355 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 D+ S L K+RIV+LG V +++A+ L+L+ ED +K I LYINS G G T AIYD M YVKP + T+C+G Sbjct: 21 DIYSRLLKDRIVFLGTPIDDDVANVVIAQLLFLESEDPDKDISLYINSPG--------GSVTSGLAIYDTMQYVKPQVSTICLG 96
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMA (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus GN=clpP2 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.145e-11 Identity = 40/104 (38.46%), Postives = 55/104 (52.88%), Query Frame = 1 Query: 295 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 P+ T +P+ + + D+ + L RI++LG V ++A+ LYL ED+ KPIYLYINS G G T AIYD M YVK + T+CVG Sbjct: 2 PIGTPSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVTDGVANSLVAQMLYLDSEDSTKPIYLYINSPG--------GSVTAGLAIYDTMKYVKSDVVTICVG 97
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPP2_BACHD (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus halodurans GN=clpP2 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.145e-11 Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 355 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 D+ S L K+RIV+LG + + I+A+ L+L+ E+ +K IYLYINS G G + FAIYD M +VKP I T+C G Sbjct: 20 DIYSRLLKDRIVFLGAAIDDQIANSIVAQLLFLEAENPKKDIYLYINSPG--------GSTSAGFAIYDTMQFVKPSIHTICTG 95 The following BLAST results are available for this feature:
BLAST of FC930221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930221 ID=FC930221; Name=FC930221; organism=Citrus clementina; type=EST; length=653bpback to top |