FC930223
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL8_HUMAN (60S ribosomal protein L8 OS=Homo sapiens GN=RPL8 PE=1 SV=2) HSP 1 Score: 185.267 bits (469), Expect = 9.335e-47 Identity = 89/141 (63.12%), Postives = 110/141 (78.01%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 GRVIR QR GAGS F++H HRKG A+ R++ F+E +GY+KG+V II DPGRGAPL +V FR P+R+ K+ ELFIAAEG++T QFVYC KKA L GNVLPV ++PEG +VC +E GDRG LARASG YA +ISHNP+ Sbjct: 2 GRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPE 142
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL8_DANRE (60S ribosomal protein L8 OS=Danio rerio GN=rpl8 PE=2 SV=3) HSP 1 Score: 185.267 bits (469), Expect = 9.335e-47 Identity = 89/141 (63.12%), Postives = 109/141 (77.30%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 GRVIR QR GAGS FK+H HRKG A+ R + F+E +GY+KG+V II DPGRGAPL +V FR P+R+ K+ ELFIAAEG++T QF+YC KKA L GNVLPV ++PEG +VC +E GDRG LARASG YA +ISHNP+ Sbjct: 2 GRVIRGQRKGAGSVFKAHVKHRKGAAKLRHIDFAERHGYIKGIVKDIIHDPGRGAPLAKVMFRDPYRFKKRTELFIAAEGIHTGQFIYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPE 142
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL8_BOVIN (60S ribosomal protein L8 OS=Bos taurus GN=RPL8 PE=2 SV=3) HSP 1 Score: 185.267 bits (469), Expect = 9.335e-47 Identity = 89/141 (63.12%), Postives = 110/141 (78.01%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 GRVIR QR GAGS F++H HRKG A+ R++ F+E +GY+KG+V II DPGRGAPL +V FR P+R+ K+ ELFIAAEG++T QFVYC KKA L GNVLPV ++PEG +VC +E GDRG LARASG YA +ISHNP+ Sbjct: 2 GRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPE 142
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL8_SPOFR (60S ribosomal protein L8 OS=Spodoptera frugiperda GN=RpL8 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 2.080e-46 Identity = 90/141 (63.83%), Postives = 108/141 (76.60%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 GRVIRAQR GAGS F SHT RKG + RSL ++E +GY+KGVV II DPGRGAPL V FR P+++ + ELFIA EG+YT QFVYC KKATL GNV+PV ++PEG +VCN+E +GDRG LARASG +A +I HNPD Sbjct: 2 GRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 142
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL8_MAMBR (60S ribosomal protein L8 OS=Mamestra brassicae GN=RpL8 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 2.080e-46 Identity = 90/141 (63.83%), Postives = 108/141 (76.60%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 GRVIRAQR GAGS F SHT RKG + RSL ++E +GY+KGVV II DPGRGAPL V FR P+++ + ELFIA EG+YT QFVYC KKATL GNV+PV ++PEG +VCN+E +GDRG LARASG +A +I HNPD Sbjct: 2 GRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 142
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL8_ICTPU (60S ribosomal protein L8 OS=Ictalurus punctatus GN=rpl8 PE=2 SV=3) HSP 1 Score: 182.956 bits (463), Expect = 4.633e-46 Identity = 88/141 (62.41%), Postives = 108/141 (76.60%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 GRVIRAQR GAGS FK+H HRKG A+ R + F+E +GY+KG+V II DPGRG PL +V FR P+R+ K+ ELFIAAEG++T QFV+C KKA L GNVLPV +PEG ++C +E GDRG LARASG YA +ISHNP+ Sbjct: 2 GRVIRAQRKGAGSVFKAHVKHRKGAAKLRHIDFAERHGYIKGIVKDIIHDPGRGTPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVFCGKKAQLNIGNVLPVGVMPEGTIICCLEEKPGDRGKLARASGNYATVISHNPE 142
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL8_ANOGA (60S ribosomal protein L8 OS=Anopheles gambiae GN=RpL8 PE=2 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 4.633e-46 Identity = 89/141 (63.12%), Postives = 106/141 (75.18%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 GRVIRAQR GAGS F++HT RKG + R L ++E +GYLKGVV QII DPGRGAPL V FR P+R+ +LFIAAEGMYT QFVYC ++A L GNVLP+ +PEG +VCN+E GDRG LAR SG YA +I+HNPD Sbjct: 2 GRVIRAQRKGAGSVFRAHTKKRKGEPKLRHLDYAERHGYLKGVVKQIIHDPGRGAPLAVVNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVLPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNPD 142
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL8_DROME (60S ribosomal protein L8 OS=Drosophila melanogaster GN=RpL8 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.348e-45 Identity = 88/141 (62.41%), Postives = 106/141 (75.18%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 GRVIRAQR GAGS FK+H RKG A+ RSL F+E +GY++GVV II DPGRGAPL V FR P+RY + ELFIA EGM+T QFVYC +KATL GNV+P+ +PEG ++CN+E GDRG LAR SG YA +I+HN D Sbjct: 2 GRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQD 142
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL8_AEDAL (60S ribosomal protein L8 OS=Aedes albopictus GN=RpL8 PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.141e-44 Identity = 87/141 (61.70%), Postives = 105/141 (74.47%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 GRVIRAQR G GS F +HT RKG + R+L ++E +GYLKG V QII DPGRGAPL V FR P+++ + +LFIAAEGMYT QFVYC K+A L GNVLP+ +PEG +VCN+E GDRG LAR SG YA +I+HNPD Sbjct: 2 GRVIRAQRKGEGSVFTAHTKKRKGEPKLRALDYAERHGYLKGTVKQIIHDPGRGAPLAVVHFRDPYKFNVRKQLFIAAEGMYTGQFVYCGKRAQLQIGNVLPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNPD 142
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL2_CANGA (60S ribosomal protein L2 OS=Candida glabrata GN=RPL2 PE=4 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 4.794e-43 Identity = 84/143 (58.74%), Postives = 107/143 (74.83%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPDND 429 GRVIR QR GAGS F SHT R+G A+ R+L ++E +GY++GVV QI+ D GRGAPL +V FR P++Y + E+FIA EG++T QF+Y KKA+L GNVLP+ S+PEG +V NVE GDRG LARASG Y +II HNPD + Sbjct: 2 GRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGVVKQIVHDAGRGAPLAKVVFRDPYKYKLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPGDRGALARASGNYVIIIGHNPDEN 144 The following BLAST results are available for this feature:
BLAST of FC930223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930223 ID=FC930223; Name=FC930223; organism=Citrus clementina; type=EST; length=432bpback to top |