FC930223
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL2_THENV (50S ribosomal protein L2P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl2p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.231e-14 Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = 1 Query: 1 GRVIRAQRMG-AGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPDND 429 G+ I QR G GS F+S + R+GP ++ L + G GY V II PG AP+ ++ + ++ AAEG+Y Q + + A+ GNV+ + PEG +V NVE GD G AR+ G YAV++ P+ + Sbjct: 2 GKRILVQRRGRGGSQFRSPSWRREGPVRYPPLG-TAGRGY----VVDIIHVPGLNAPVAKIRLENGLEFLNY-----AAEGLYVGQEIEIGEAASPKTGNVVVLGKAPEGTMVFNVEKRPGDGGKFARSGGTYAVVVGQKPEEN 135
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL2_METMA (50S ribosomal protein L2P OS=Methanosarcina mazei GN=rpl2p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.231e-14 Identity = 45/142 (31.69%), Postives = 76/142 (53.52%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSG-FKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFI-AAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNP 420 G+ + +Q G G+ +++ +H K + + + N L+G V I DP R AP+ +V F + ELF+ A+EG+ + C A + GN++P+ ++PEG +CN+E D G R+SGVYA +++H P Sbjct: 2 GKRLISQNRGRGTPTYRAPSHKYKADLRHPRV---DENTSLQGEVIDIEHDPARSAPIAKVAFENG------EELFLLASEGVAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNIESKPNDGGKFVRSSGVYATVVTHEP 134
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL2_DESK1 (50S ribosomal protein L2P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl2p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.231e-14 Identity = 51/135 (37.78%), Postives = 66/135 (48.89%), Query Frame = 1 Query: 4 RVIRAQRMGAGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVII 408 R+I +R A FK+ H PA++ L + + K VV ++ DPGR PL QV + A EGMY Q + A + GN+LPV IPEG V N+E GD G RASG YAVI+ Sbjct: 4 RIIPQRRGKASPVFKTPDHIHVAPARYPLL---DPSKTYKAVVEDLVHDPGRWVPLAQVKLETGLVFYVP-----AVEGMYAGQIIEIGPGAKPVNGNILPVGMIPEGMQVVNIEKRPGDGGKFVRASGTYAVIV 130
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL2_CALMQ (50S ribosomal protein L2P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl2p PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.607e-14 Identity = 45/140 (32.14%), Postives = 73/140 (52.14%), Query Frame = 1 Query: 1 GRVIRAQRMG-AGSGFKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFI-AAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISH 414 G+ I QR G GS F+S + R P ++ + ++G++ +++ G AP V + E+++ A EG+Y + + A + GNV+P+ IPEG +VCN+E VGD G AR+SG Y V++ H Sbjct: 2 GKKILVQRAGRGGSQFRSPSWRRIAPLRYVQFSEEQLKTTIRGIIKELVHVTGLNAPAMHVVLENG------EEMYLPAVEGVYVGKIIEFGPDAKVEPGNVMPIGKIPEGTMVCNIEKRVGDGGKYARSSGTYGVVMIH 135
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL2_SULIY (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.099e-14 Identity = 45/142 (31.69%), Postives = 78/142 (54.93%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSG-FKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 G+ + QR G GS F+S + R G ++ +++ G+L G V I+ +PG AP+ + + +++ Q A +G+ +Q + K + + GNV+ + PEG +VCNVE + GD G AR++G YAV++ + D Sbjct: 2 GKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNAPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKSGD 133
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL2_SULIM (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.099e-14 Identity = 45/142 (31.69%), Postives = 78/142 (54.93%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSG-FKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 G+ + QR G GS F+S + R G ++ +++ G+L G V I+ +PG AP+ + + +++ Q A +G+ +Q + K + + GNV+ + PEG +VCNVE + GD G AR++G YAV++ + D Sbjct: 2 GKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNAPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKSGD 133
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL2_SULIL (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.099e-14 Identity = 45/142 (31.69%), Postives = 78/142 (54.93%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSG-FKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 G+ + QR G GS F+S + R G ++ +++ G+L G V I+ +PG AP+ + + +++ Q A +G+ +Q + K + + GNV+ + PEG +VCNVE + GD G AR++G YAV++ + D Sbjct: 2 GKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNAPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKSGD 133
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL2_SULIK (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl2p PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.099e-14 Identity = 45/142 (31.69%), Postives = 78/142 (54.93%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSG-FKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 G+ + QR G GS F+S + R G ++ +++ G+L G V I+ +PG AP+ + + +++ Q A +G+ +Q + K + + GNV+ + PEG +VCNVE + GD G AR++G YAV++ + D Sbjct: 2 GKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNAPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKSGD 133
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL2_SULIA (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.16.27) GN=rpl2p PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.099e-14 Identity = 45/142 (31.69%), Postives = 78/142 (54.93%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSG-FKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 G+ + QR G GS F+S + R G ++ +++ G+L G V I+ +PG AP+ + + +++ Q A +G+ +Q + K + + GNV+ + PEG +VCNVE + GD G AR++G YAV++ + D Sbjct: 2 GKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNAPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKSGD 133
BLAST of FC930223 vs. ExPASy Swiss-Prot
Match: RL2_THEON (50S ribosomal protein L2P OS=Thermococcus onnurineus (strain NA1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.580e-14 Identity = 48/142 (33.80%), Postives = 76/142 (53.52%), Query Frame = 1 Query: 1 GRVIRAQRMGAGSG-FKSHTHHRKGPAQFRSLYFSEGNGYLKGVVAQIILDPGRGAPLDQVTFRHPFRYMKQNELFIAAEGMYTDQFVYCAKKATLMGGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGVYAVIISHNPD 423 G+ + QR G G+ F++ +H +G ++ L ++ L G V +I+ DPGR AP+ +V F + +L IA EG+ + + A + GN LP+ IPEG+ V ++E GD G RA GVYA+++S D Sbjct: 2 GKSLIQQRRGKGTTTFRAPSHRYRGAVRYVPLNLTKEKT-LVGKVVEILHDPGRTAPVARVKFENGME-----KLIIAPEGILVGEEIAIGPNAPIKIGNTLPLAMIPEGSYVYDIEGTPGDGGKYVRAGGVYALVVSREKD 137 The following BLAST results are available for this feature:
BLAST of FC930223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930223 ID=FC930223; Name=FC930223; organism=Citrus clementina; type=EST; length=432bpback to top |