FC930224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_SULIL (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.919e-31 Identity = 77/200 (38.50%), Postives = 115/200 (57.50%), Query Frame = 1 Query: 82 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV 678 MG+ + QR G GS F+S + R G ++ ++ G+L G V +I+H+PG AP+A + + +++ Q A +G+ Q + GK + + GNV+ + PEG +VCNVE + GD G AR++G YAV++ + D +KLPS K + + RA +G VAGGG EKPLLKAG Y K++VK WP V Sbjct: 1 MGKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNAPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKS--GDKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIV 188
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_SULIK (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl2p PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.919e-31 Identity = 77/200 (38.50%), Postives = 115/200 (57.50%), Query Frame = 1 Query: 82 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV 678 MG+ + QR G GS F+S + R G ++ ++ G+L G V +I+H+PG AP+A + + +++ Q A +G+ Q + GK + + GNV+ + PEG +VCNVE + GD G AR++G YAV++ + D +KLPS K + + RA +G VAGGG EKPLLKAG Y K++VK WP V Sbjct: 1 MGKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNAPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKS--GDKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIV 188
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_SULIA (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.16.27) GN=rpl2p PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.919e-31 Identity = 77/200 (38.50%), Postives = 115/200 (57.50%), Query Frame = 1 Query: 82 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV 678 MG+ + QR G GS F+S + R G ++ ++ G+L G V +I+H+PG AP+A + + +++ Q A +G+ Q + GK + + GNV+ + PEG +VCNVE + GD G AR++G YAV++ + D +KLPS K + + RA +G VAGGG EKPLLKAG Y K++VK WP V Sbjct: 1 MGKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNAPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKS--GDKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIV 188
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_SULIN (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl2p PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.013e-30 Identity = 76/200 (38.00%), Postives = 114/200 (57.00%), Query Frame = 1 Query: 82 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV 678 MG+ + QR G GS F+S + R G ++ ++ G+L G V +I+H+PG P+A + + +++ Q A +G+ Q + GK + + GNV+ + PEG +VCNVE + GD G AR++G YAV++ + D +KLPS K + + RA +G VAGGG EKPLLKAG Y K++VK WP V Sbjct: 1 MGKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNTPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKS--GDKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIV 188
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_SULAC (50S ribosomal protein L2P OS=Sulfolobus acidocaldarius GN=rpl2p PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.629e-30 Identity = 78/200 (39.00%), Postives = 113/200 (56.50%), Query Frame = 1 Query: 82 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV 678 MG+ + QR G G + F+S + R GPA++ +++ G KG + +I+H+PG AP+ +V + ++ A +G+ GQ + GK AT+ GN++ V +PEG V+CNVE GD G ARA+G YAVI + +KL S + RA +G +AGGG EKPLLKAGN Y K+RV+ WP V Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGPARYPNIE-----GDHKGKIIDILHNPGVTAPVVKVKLDNGLQFY-----IPAVQGVAVGQEISIGKNATISNGNIVEVGQLPEGTVICNVEKLKGDGGKFARAAGSYAVI--SGKAGNKVLIKLSSEKIVEVSQNARATVGIIAGGGFVEKPLLKAGNNYWKYRVRAVKWPVV 188
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_METBU (50S ribosomal protein L2P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl2p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.485e-30 Identity = 75/200 (37.50%), Postives = 108/200 (54.00%), Query Frame = 1 Query: 82 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV 678 M + I +Q +G GS +++ +H K + +D L G V I HDP R AP+A V F + +K+ + EG+ G+ + CG A + GN LP+ IPEG +CN+E D G AR+SG YA ++S + V++PSG K CRA IG VAGGGR ++P LKAG YHK + + +P+V Sbjct: 1 MAKRIISQNRGRGSPTYRAPSHKYKAELKHPRVD---EESTLNGTVIGIEHDPARSAPIAMVAFENG-----KKQFIVVPEGISVGEKLSCGVSAEVKPGNTLPLAEIPEGIPICNIESKPNDGGQYARSSGVYATLVSR--ELSKVVVRMPSGVLKWFHPKCRATIGIVAGGGRVDRPFLKAGKKYHKMKARAAKYPRV 190
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_ARCFU (50S ribosomal protein L2P OS=Archaeoglobus fulgidus GN=rpl2p PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.305e-29 Identity = 74/200 (37.00%), Postives = 107/200 (53.50%), Query Frame = 1 Query: 82 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV 678 MG+ I +Q +G G+ +++ +H K A+ ++ + V +I HD R P+A V + +A EG+ TG VY G + GN+ +++IPEG VCN+E GD G RASG + ++S D V++PSG +K CRAMIG VAGGGRT+KP +KAG YHK + K WP+V Sbjct: 1 MGKRIISQNRGKGTPTYRAPSHRYKTDAKLLRF----KDEVVAAKVIDIQHDSARNGPVALVKLPDG-----SETYILAVEGLGTGDVVYAGDNVEIASGNITYLKNIPEGTPVCNIEAQPGDGGKFIRASGTFGFVVSREADK--VLVQMPSGKQKWFHPNCRAMIGVVAGGGRTDKPFVKAGKKYHKMKSKAAKWPRV 189
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_SULTO (50S ribosomal protein L2P OS=Sulfolobus tokodaii GN=rpl2p PE=3 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.704e-29 Identity = 75/200 (37.50%), Postives = 111/200 (55.50%), Query Frame = 1 Query: 82 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV 678 MG+ + QR G G + F+S + R G A+ +++ G G V +I+H+PG APLA + ++ + +G+ GQ + GK A + GN++ V ++PEG ++ N+E GD G AR++G Y V++ D VKL S + S RA++G VAGGG TEKPLLKAGN Y K++VK WP V Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLALIKLDDGTKFYVP-----SVQGLVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGKFARSAGTYGVVVGKT--GDKVLVKLSSEKIAQVSSNARAIVGVVAGGGVTEKPLLKAGNNYWKYKVKAKKWPHV 188
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_SULSO (50S ribosomal protein L2P OS=Sulfolobus solfataricus GN=rpl2p PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.226e-29 Identity = 75/200 (37.50%), Postives = 113/200 (56.50%), Query Frame = 1 Query: 82 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV 678 MG+ + QR G GS F++ R G ++ ++ G+ G V +I+H+PG AP+A V + +++ Q A +G+ Q + GK + + GNV+ + PEG +VCNVE + GD G AR++G YAV++ + D ++LPS K + + RA +G VAGGG EKPLLKAG Y K++VK WP V Sbjct: 1 MGKNLLQQRAGKGSPTFRNPGWLRIGKVRYPNIF-----GHFIGKVIDIVHNPGMNAPVALVKLENGTKFLMQ-----AIQGLVVNQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKS--GDRVLIRLPSDKIKAVSNKARATVGIVAGGGVIEKPLLKAGANYWKYKVKAKKWPIV 188
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_METPE (50S ribosomal protein L2P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl2p PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.476e-29 Identity = 76/200 (38.00%), Postives = 106/200 (53.00%), Query Frame = 1 Query: 82 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV 678 MG I+ Q +G G +++ +H K A+ + L G ++GV+ +I HDP R P+A V + K + EG+ G V G +A + GN LP+ IP G+ +CN+E GD G RASG A+II D VK+PSG K S C A +G VAGGGR EKP +KAG +HK + + WP+V Sbjct: 1 MGHRIKTQNRGRGGPTYRAPSHQYK--AELKHL--GNDKVTVRGVIIDIEHDPARHTPIALVRLEGEGK----KVYLLVTEGLGVGDQVAWGPEAEVKNGNTLPISKIPTGSYICNIEARPGDGGKFVRASGVQAIIIDKTVDR--VGVKMPSGKMKWFSSRCLATVGVVAGGGRGEKPFVKAGKKFHKVKSQATYWPRV 190 The following BLAST results are available for this feature:
BLAST of FC930224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930224 ID=FC930224; Name=FC930224; organism=Citrus clementina; type=EST; length=678bpback to top |