FC930224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_PICTO (50S ribosomal protein L2P OS=Picrophilus torridus GN=rpl2p PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.889e-20 Identity = 68/196 (34.69%), Postives = 101/196 (51.53%), Query Frame = 1 Query: 82 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGN--AYHKFRVKR 660 MG+ I AQR+G GS V++S +H G ++ R+G K + +II PGR P+ + +K IA G Y Q ++ G + +G+V + +IP+G+ V N+E GD G RA+G A++ISH +KLPSG K CRA +G +AG G + P+LKAG Y + + KR Sbjct: 1 MGKHIVAQRRGHGSLVYRSPSHRHLGDIKY------PRDGTYK--IEDIIQAPGRNTPVLLIR-----NEKNEKNYMIAFNGAYVNQEIHVGDIDSPAIGDVTYLANIPDGSYVYNIESIPGDGGKFCRAAGTAALVISHGA---YVSLKLPSGVNKEFHPRCRATVGFIAGSGARDIPILKAGTHIKYLQSKAKR 180
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_THEAC (50S ribosomal protein L2P OS=Thermoplasma acidophilum GN=rpl2p PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.224e-19 Identity = 65/193 (33.68%), Postives = 97/193 (50.26%), Query Frame = 1 Query: 82 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVK 657 MG+ I QR+G GS V++S +H + + +D G V+ +IIH PGR APL + +K IA G + GQ + G ++ G + +IP+G+ V N+E GD G R++G +A+++SH +KLPSG + CRA +G VA G + P+LKAG H R K Sbjct: 1 MGKHIIPQRRGHGSLVYRSPSHRHI--TEVKHVDQGTY------VIKDIIHAPGRNAPLLELMGSDG-----KKAYQIAFTGAFVGQNIVAGNVDSVSPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSH---GQHVTLKLPSGRMRDFDPRCRATLGVVAASGIKDPPILKAGTHVHYLRSK 177
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_BORRA (50S ribosomal protein L2 OS=Borrelia recurrentis (strain A1) GN=rplB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19 Identity = 63/187 (33.69%), Postives = 98/187 (52.41%), Query Frame = 1 Query: 85 GRVIRAQRKGAG--SVFKSHTHHRKGPAQFRSLDFGERNGY-LKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA 636 G+V RA R +G SV + H++ ++R +DF R+ + + VA I +DP R +A + +R K IA +G+ G + G A + +GN LP+ +IP G +V N+E ++G G L R +G YA+II+ D D VKLPSG ++I C A +G+V + KAG + Sbjct: 37 GKVSRAGRDSSGRISVRRRGGGHKR---RYREIDFARRDKFGIPARVAAIEYDPNRSPNIALLVYRDG-----DKRYIIAPKGVKVGDILESGPNAPIKIGNALPLENIPVGKMVHNIELNIGKGGQLVRGAGGYAMIIA--SDGDYVTVKLPSGEMRMIFKKCIATLGEVGNEDYMNVSIGKAGKS 213
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_BORDL (50S ribosomal protein L2 OS=Borrelia duttonii (strain Ly) GN=rplB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19 Identity = 63/187 (33.69%), Postives = 98/187 (52.41%), Query Frame = 1 Query: 85 GRVIRAQRKGAG--SVFKSHTHHRKGPAQFRSLDFGERNGY-LKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA 636 G+V RA R +G SV + H++ ++R +DF R+ + + VA I +DP R +A + +R K IA +G+ G + G A + +GN LP+ +IP G +V N+E ++G G L R +G YA+II+ D D VKLPSG ++I C A +G+V + KAG + Sbjct: 37 GKVSRAGRDSSGRISVRRRGGGHKR---RYREIDFARRDKFGIPARVAAIEYDPNRSPNIALLVYRDG-----DKRYIIAPKGVKVGDILESGPNAPIKIGNALPLENIPVGKMVHNIELNIGKGGQLVRGAGGYAMIIA--SDGDYVTVKLPSGEMRMIFKKCIATLGEVGNEDYMNVSIGKAGKS 213
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_DESAP (50S ribosomal protein L2 OS=Desulforudis audaxviator (strain MP104C) GN=rplB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.354e-18 Identity = 61/186 (32.80%), Postives = 94/186 (50.54%), Query Frame = 1 Query: 91 VIRAQRKGAGSVFKSHT--HHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA 636 ++ RK AG F+ HR G + +R +DF + G VA I +DP R A +A V + +K +A G+ GQ + G +A + VGN LP+R+IP G ++ N+E + G + R++G A +++ + D V+LPSG ++ P CRA IGQV + KAG A Sbjct: 33 LVEPLRKKAGRNFQGRVTVRHRGGGHKRLYRVIDFKRNKDGVPGKVATIEYDPNRSANIALVNYADG-----EKRYIVAPAGLKVGQEIMSGPQADIKVGNALPLRNIPPGVLIHNIELYPGHGARVVRSAGGSAQLMA--KEGDYAHVRLPSGEVRLFPLDCRATIGQVGNVEHENIVIGKAGRA 211
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_MYCAP (50S ribosomal protein L2 OS=Mycoplasma agalactiae (strain PG2) GN=rplB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.768e-18 Identity = 62/194 (31.96%), Postives = 94/194 (48.45%), Query Frame = 1 Query: 67 SPSKEMGRVIRAQRKGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYH 642 +P K + VI + G + K H+ G + +R +DF + V I +DP R A + + + +K +A EG+ GQ V G ++VGN LP+ +IPEG V NVE G G++AR++G A I+ + D ++L SG + I + CRA IG V G + L KAG + H Sbjct: 29 APEKSL-LVILKKNSGRNNQGKITVRHQGGRVKRYYRIIDFKRNKDDIPATVKSIEYDPNRSANICLLAYADG-----EKRYILAPEGIKVGQKVVSGNNVDILVGNSLPLSNIPEGTFVHNVEMQPGGGGIIARSAGTSAQILGKDDDGKYVVLRLKSGEMRRILARCRATIGTVGNGEHSLVLLGKAGRSRH 216
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_OCEIH (50S ribosomal protein L2 OS=Oceanobacillus iheyensis GN=rplB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18 Identity = 68/198 (34.34%), Postives = 102/198 (51.52%), Query Frame = 1 Query: 49 AQAQSLSPSKEMGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA 636 A+ + +P K + IR +R G + K H+ G Q+R +DF + G VA I +DP R A +A V + +K IA +G+ GQ + G+ A + +GN LP+ SIP G V+ N+E G G +AR++G A I+ + T V+L SG ++I + CRA IGQV G E L++ G A Sbjct: 22 AEITTDTPEKSLLSPIR-KRGGRNNQGKLTVRHQGGGHKRQYRIIDFKRDKDGIPGRVATIEYDPNRSANIALVHYADG-----EKRYIIAPKGIKVGQEIESGENADIKLGNALPLGSIPVGTVIHNIELKPGRGGQIARSAGAEAQILGR--EEKYTLVRLSSGEVRLILTTCRATIGQV---GNIEHELVRVGKA 208
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_LISW6 (50S ribosomal protein L2 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=rplB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.938e-18 Identity = 62/198 (31.31%), Postives = 100/198 (50.51%), Query Frame = 1 Query: 49 AQAQSLSPSKEMGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA 636 A+ + +P K + R ++ ++ G + K H G Q+R +DF + G VA I +DP R A +A + + +K IAA+G+ GQ +Y G +A + +GN L ++ IP G VV N+E G G L R++G A ++ + ++L SG ++I + CRA IGQV G + L+ G A Sbjct: 22 AEITTSTPEKSLLRPLK-KKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKIGNALELKDIPVGTVVHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQV---GNEQHELINIGKA 208
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_LISMO (50S ribosomal protein L2 OS=Listeria monocytogenes GN=rplB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.938e-18 Identity = 62/198 (31.31%), Postives = 100/198 (50.51%), Query Frame = 1 Query: 49 AQAQSLSPSKEMGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA 636 A+ + +P K + R ++ ++ G + K H G Q+R +DF + G VA I +DP R A +A + + +K IAA+G+ GQ +Y G +A + VGN L ++ IP G V+ N+E G G L R++G A ++ + ++L SG ++I + CRA IGQV G + L+ G A Sbjct: 22 AEITTSTPEKSLLRPLK-KKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQV---GNEQHELINIGKA 208
BLAST of FC930224 vs. ExPASy Swiss-Prot
Match: RL2_LISMF (50S ribosomal protein L2 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=rplB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.938e-18 Identity = 62/198 (31.31%), Postives = 100/198 (50.51%), Query Frame = 1 Query: 49 AQAQSLSPSKEMGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA 636 A+ + +P K + R ++ ++ G + K H G Q+R +DF + G VA I +DP R A +A + + +K IAA+G+ GQ +Y G +A + VGN L ++ IP G V+ N+E G G L R++G A ++ + ++L SG ++I + CRA IGQV G + L+ G A Sbjct: 22 AEITTSTPEKSLLRPLK-KKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQV---GNEQHELINIGKA 208 The following BLAST results are available for this feature:
BLAST of FC930224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930224 ID=FC930224; Name=FC930224; organism=Citrus clementina; type=EST; length=678bpback to top |