FC930234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI_STRCO (Isopentenyl-diphosphate Delta-isomerase OS=Streptomyces coelicolor GN=idi PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.296e-13 Identity = 53/155 (34.19%), Postives = 73/155 (47.10%), Query Frame = 2 Query: 224 LVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGK-WGEHELDYLLFIVRDVSVNPNPDEVAEYXYVN 685 LVDEN +G K + H + LHRAFSVFLF+ + LL+QQR+ K P VW+NTCC HP E+ AA R+ +ELG V G + Y P E E ++L + + P+P+EVA +V+ Sbjct: 24 LVDENGVTIGTAEKLSAH-----QPPGRLHRAFSVFLFDERGRLLIQQRALGKYHSPGVWSNTCCGHPYPGEAPFA---------AAARRTFEELG-----VSPSLLAEAGTVRYNHPDPASGLVEQEYNHLFVGLVQAELRPDPEEVAGTAFVS 159
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI_STRGG (Isopentenyl-diphosphate Delta-isomerase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=idi PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13 Identity = 52/154 (33.77%), Postives = 72/154 (46.75%), Query Frame = 2 Query: 224 LVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGK-WGEHELDYLLFIVRDVSVNPNPDEVAEYXYV 682 LVDEN +G K H ++ LHRAFSVFLF+ + LLLQ+R+ K P VW+NTCC HP E+ AA R+ +ELG+ G + Y P E E ++L + + P+P+EV E +V Sbjct: 24 LVDENGTTIGTAEKLAAH-----QAPGQLHRAFSVFLFDEQGRLLLQRRALGKYHSPGVWSNTCCGHPYPGEAPFA---------AAARRTHEELGLSP-----SLLAEAGTVRYNHPDPASGLVEQEFNHLFVGLAQTAPKPDPEEVGETAFV 158
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI_SACEN (Isopentenyl-diphosphate Delta-isomerase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=idi PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13 Identity = 48/152 (31.58%), Postives = 79/152 (51.97%), Query Frame = 2 Query: 212 DECILVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVA 667 ++ +L++++ + +G +K H ++ LH AFS ++FN + +LLL QR+ K T+P VWTNTCC HP +E+ + A R+L +ELG+ D+ + L R Y+A E+E+ + D PN +EVA Sbjct: 2 EQVVLLNDSGQAIGVTDKATVHHLD-----TPLHLAFSCYVFNGRGQLLLTQRAHEKRTWPGVWTNTCCGHPAPQEA---------MPEAITRRLGEELGLTVRDLTL----VLPRFRYRAVMGNGVVENEICPVFAAFTDDEPAPNREEVA 135
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI_HALHL (Isopentenyl-diphosphate Delta-isomerase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=idi PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12 Identity = 54/150 (36.00%), Postives = 73/150 (48.67%), Query Frame = 2 Query: 212 DECILVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYL-LFIVRDVSVNPNPD 658 + ++VD + VG E K H+ LH AF VF+FN + ELLLQ+R+ +K F +W+NTCC HP E GV AA+R+L +E G PV +FT Y A D G E +Y + I R + P PD Sbjct: 2 EHVVIVDPEGQRVGTEEKIRAHA-----DGGTLHLAFCVFVFNPRGELLLQRRADSKYHFSGLWSNTCCGHPRPGE---------GVTEAAERRLGEEFGFVTRLHPVAQFT------YHA-EDHHTGLAEYEYAHVLIGRAPTDQPAPD 130
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI_STRAW (Isopentenyl-diphosphate Delta-isomerase OS=Streptomyces avermitilis GN=idi PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12 Identity = 52/154 (33.77%), Postives = 71/154 (46.10%), Query Frame = 2 Query: 224 LVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPS-DGKWGEHELDYLLFIVRDVSVNPNPDEVAEYXYV 682 LVDEN +G K H + LHRAFSVFLF+ + LLLQQR+ K P VW+NTCC HP E+ AA R+ +ELG V G + Y P D E E ++L + + P+ +E+ + +V Sbjct: 24 LVDENGTTIGTAEKLAAH-----QPPGQLHRAFSVFLFDEQGRLLLQQRALGKYHSPGVWSNTCCGHPYPGEAPFA---------AAARRTHEELG-----VSPSLLAEAGTVRYNHPDPDSGLVEQEFNHLFVGLVQSPLRPDAEEIGDTAFV 158
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI_KLEP7 (Isopentenyl-diphosphate Delta-isomerase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=idi PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.645e-12 Identity = 58/163 (35.58%), Postives = 85/163 (52.15%), Query Frame = 2 Query: 203 MFEDECILVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV-PVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVS-VNPNPDEVAEYXYVN 685 M + IL+DE D+ G KY H+ + LH AFS +LFN + +LL+ +RS K +P VWTN+ C HP ++ E E+ A R+ ELG+ D+ PV P R Y+A + E+E+ ++ R VS V PN DEV +Y +V+ Sbjct: 1 MAGEHVILLDEQDQPAGMLEKYAAHTFD-----TPLHLAFSCWLFNQQGQLLVTRRSLGKKAWPGVWTNSVCGHP--QQGETFEQ-------AVTRRCRFELGVEISDIAPVH---PAFR--YRAVAPNGIVENEV-CPVYAARVVSEVQPNDDEVMDYQWVD 143
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI_KLEP3 (Isopentenyl-diphosphate Delta-isomerase OS=Klebsiella pneumoniae (strain 342) GN=idi PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11 Identity = 55/162 (33.95%), Postives = 83/162 (51.23%), Query Frame = 2 Query: 203 MFEDECILVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVS-VNPNPDEVAEYXYVN 685 M + IL+DE D+ G KY H+++ LH AFS +LFN + + L+ +RS K +P VWTN+ C HP ++ E E+ A R+ ELG+ E + P R Y+A + E+E+ ++ R VS V PN DEV +Y +V+ Sbjct: 1 MAGEHVILLDEQDQPAGMLEKYAAHTLD-----TPLHLAFSCWLFNQQGQFLVTRRSLGKKAWPGVWTNSVCGHP--QQGETFEQ-------AVTRRCRFELGV--EIADIAPIHPAFR--YRAVAPNGIVENEV-CPVYAARVVSQVQPNDDEVMDYQWVD 143
BLAST of FC930234 vs. ExPASy Swiss-Prot
Match: IDI_MYCVP (Isopentenyl-diphosphate Delta-isomerase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=idi PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11 Identity = 50/155 (32.26%), Postives = 81/155 (52.26%), Query Frame = 2 Query: 221 ILVDENDRVVGHENKYNCHSMERIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDV-SVNPNPDEVAEYXYV 682 +L+D++ R +G K H + LH AFS +LF+ +LL +R+ K TFP +WTNTCC HP E+ +++A R++ +ELG+ D+ L Y+A + E+E+ +F R V V+P+ DEVA++ +V Sbjct: 11 VLLDDDGRTIGSAPKAQVH-----HASTPLHLAFSCYLFDDAGRVLLTRRAVHKRTFPGIWTNTCCGHPAPGEA---------LQDAVTRRVREELGVGITDLR----CVLPDFRYRAVAADGVVENEV-CPVFCGRAVGQVHPDRDEVADHVWV 146 The following BLAST results are available for this feature:
BLAST of FC930234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930234 ID=FC930234; Name=FC930234; organism=Citrus clementina; type=EST; length=689bpback to top |