FC930237
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 1.602e-49 Identity = 60/120 (50.00%), Postives = 74/120 (61.67%), Query Frame = 2 Query: 101 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAF 448 A CGS G VCP CCS+FGWCG T+DYC GCQS C+ CG P + G + I+SR +F+ +L +RND CPA FYTYDAF+ AA AFP F +G + KRE+AAF Sbjct: 21 AEQCGSQAGGAVCPNCLCCSQFGWCGSTSDYCGAGCQSQCSAAGCGGGGPTPPSGSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAF 140 HSP 2 Score: 90.1225 bits (222), Expect = 1.602e-49 Identity = 45/76 (59.21%), Postives = 51/76 (67.11%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNRE-VGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYITYG 641 K ++ F AQT HETTGGW AP G YAWGYCF E GAA DYC + +PC KYYGRGPIQLS+N+ YG Sbjct: 134 KREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNF-NYG 208
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.602e-49 Identity = 65/122 (53.28%), Postives = 77/122 (63.11%), Query Frame = 2 Query: 98 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 SA CGS G C G CCS+FGWCG T DYC G CQS C P T GG+LG IIS MF+ +L++RND C + FY+Y+AFI AA++FP FG SG+ T RKREIAAFF Sbjct: 22 SAEQCGSQAGGARCASGLCCSKFGWCGNTNDYCGPGNCQSQC---------PGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFF 134 HSP 2 Score: 88.9669 bits (219), Expect = 1.602e-49 Identity = 44/75 (58.67%), Postives = 52/75 (69.33%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYITYG 641 K ++ FFAQT HETTGGW AP G YAWGYC+ RE G + DYC P+ +PC KY+GRGPIQ+S NY YG Sbjct: 127 KREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQG-SPGDYCTPSGQWPCAPGRKYFGRGPIQISHNY-NYG 199
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 2.090e-49 Identity = 62/116 (53.45%), Postives = 74/116 (63.79%), Query Frame = 2 Query: 104 GNCGSGVVCPGGECCSRFGWCGLTTDYCC-EGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 G G +CPGG CCS+FGWCG T DYC GCQS C+ G A G L +ISR+ F +L +RND CPAR FYTYDAFI AA++FPAF +G++ RKREIAAF Sbjct: 4 GRQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCS---------GSGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAF 110 HSP 2 Score: 90.5077 bits (223), Expect = 2.090e-49 Identity = 49/77 (63.64%), Postives = 55/77 (71.43%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGG--WPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLSWNYITYG 641 K ++ F AQT HETTGG W AP G YAWGYC+NRE+ SS YC DPNYPC GK Y+GRGP+QLSWNY YG Sbjct: 104 KREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNY-NYG 177
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.026e-49 Identity = 63/122 (51.64%), Postives = 77/122 (63.11%), Query Frame = 2 Query: 101 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTA-GDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 A NCGS G C G+CCS+FGWCG T DYC G CQS C P G G GG+LG IS MF+ +L++RN+ C + FY+Y+AFI AA++FP FG SG+ RKREIAAFF Sbjct: 26 AQNCGSQGGGKACASGQCCSKFGWCGNTNDYCGSGNCQSQC---------PGGGPGPGPGGDLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFF 138 HSP 2 Score: 89.7373 bits (221), Expect = 6.026e-49 Identity = 45/75 (60.00%), Postives = 51/75 (68.00%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYITYG 641 K ++ FFAQT HETTGGW AP G YAWGYCF RE G DYC P+ +PC KY+GRGPIQ+S NY YG Sbjct: 131 KREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERG-NPGDYCPPSSQWPCAPGRKYFGRGPIQISHNY-NYG 203
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.024e-48 Identity = 58/116 (50.00%), Postives = 76/116 (65.52%), Query Frame = 2 Query: 110 CGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 CGS G +CP CCS++GWCG T+ YC GCQS C+ CG P + G G + I+SR +F+ +L +RND CPA+ FYTYDAF+ AA AFP+F +G+ RKRE+AAF Sbjct: 23 CGSQAGGALCPNCLCCSQYGWCGSTSAYCGSGCQSQCSGS-CGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAF 137 HSP 2 Score: 87.4261 bits (215), Expect = 1.024e-48 Identity = 43/76 (56.58%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNRE-VGAASSDYC--DPNYPCRG--KYYGRGPIQLSWNYITYG 641 K ++ F AQT HETTGGW AP G Y+WGYCF E G SDYC +PC KYYGRGPIQ+S+NY YG Sbjct: 131 KREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNY-NYG 205
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.266e-48 Identity = 64/120 (53.33%), Postives = 79/120 (65.83%), Query Frame = 2 Query: 101 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECD-PDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 A CG+ G CP CCSR+GWCG T+D+C +GCQS C+ CG P + DG +G I+ R +FE LL +RND CPAR FYTY+AF+ AA AFPAFG +GN RKRE+AAF Sbjct: 32 AEQCGAQAGGARCPNCLCCSRWGWCGTTSDFCGDGCQSQCSG--CGPTPTPTPPSPSDG--VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAF 147 HSP 2 Score: 87.4261 bits (215), Expect = 2.266e-48 Identity = 42/75 (56.00%), Postives = 51/75 (68.00%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYITYG 641 K ++ F QT HETTGGWP AP G ++WGYCF +E SDYC P+ +PC KYYGRGPIQLS+N+ YG Sbjct: 141 KREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQN-PPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNF-NYG 213
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 2.266e-48 Identity = 62/124 (50.00%), Postives = 78/124 (62.90%), Query Frame = 2 Query: 101 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELG-----KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 A CGS G +CP CCS +GWCG T+DYC +GCQS C+ CG G G GG G ++S+++FE LL +RND CPAR FYTYDA + AA AFP F +G++ RKRE+AAF Sbjct: 23 AEQCGSQAGGALCPNCLCCSSYGWCGSTSDYCGDGCQSQCDG--CGGGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAF 144 HSP 2 Score: 89.3521 bits (220), Expect = 2.266e-48 Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYITYG 641 K ++ F QT HETTGGW AP G Y+WGYCF E+GA +S YC P+ +PC KY+GRGPIQLS+NY YG Sbjct: 138 KREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATAS-YCVPSAEWPCAPDKKYFGRGPIQLSYNY-NYG 210
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 5.020e-48 Identity = 62/123 (50.41%), Postives = 75/123 (60.98%), Query Frame = 2 Query: 98 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 SA CGS G +C G CCS+FGWCG T DYC G CQS C G G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T RKREIAAFF Sbjct: 17 SAEQCGSQAGGALCASGLCCSKFGWCGDTNDYCGPGNCQSQC-----------PGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFF 128 HSP 2 Score: 93.9745 bits (232), Expect = 5.020e-48 Identity = 46/75 (61.33%), Postives = 53/75 (70.67%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYITYG 641 K ++ FFAQT HETTGGWP AP G YAWGYCF RE G + DYC P+ +PC KY+GRGPIQ+S NY YG Sbjct: 121 KREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQG-SPGDYCTPSSQWPCAPGRKYFGRGPIQISHNY-NYG 193
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.543e-48 Identity = 63/123 (51.22%), Postives = 77/123 (62.60%), Query Frame = 2 Query: 101 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCG----ECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 A CGS G CP CCSRFGWCG T+DYC +GCQS C CG P +G GG + I+SR +F+ +L +RND C A+ FYTYDAF+ AA AFP FG +G+ RKRE+AAF Sbjct: 19 AEQCGSQAGGATCPNCLCCSRFGWCGSTSDYCGDGCQSQC--AGCGGGGTPVTPTPTPSGGGG-VSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAF 138 HSP 2 Score: 88.5817 bits (218), Expect = 6.543e-48 Identity = 46/75 (61.33%), Postives = 54/75 (72.00%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLSWNYITYG 641 K ++ F AQT HETTGGW AP G +AWGYCF +E G A+S+YC P+ +PC GK YYGRGPIQLS NY YG Sbjct: 132 KREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNY-NYG 204
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.450e-47 Identity = 60/123 (48.78%), Postives = 75/123 (60.98%), Query Frame = 2 Query: 98 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 SA CG G C G CCS FGWCG T DYC G CQS C + P G GG++G +IS MF+ +L++RND C + FY+Y+AFI AA++F FG +G+ T RKREIAAFF Sbjct: 17 SAEQCGKQAGGARCAAGLCCSNFGWCGNTNDYCGPGKCQSQCPSGPSPK-PPTPGPGPSGGDIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFF 138 HSP 2 Score: 93.9745 bits (232), Expect = 1.450e-47 Identity = 46/75 (61.33%), Postives = 53/75 (70.67%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYITYG 641 K ++ FFAQT HETTGGWP AP G YAWGYCF RE G + DYC P+ +PC KY+GRGPIQ+S NY YG Sbjct: 131 KREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQG-SPGDYCTPSGQWPCAPGRKYFGRGPIQISHNY-NYG 203 The following BLAST results are available for this feature:
BLAST of FC930237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930237 ID=FC930237; Name=FC930237; organism=Citrus clementina; type=EST; length=730bpback to top |