FC930237
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.231e-37 Identity = 48/75 (64.00%), Postives = 52/75 (69.33%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLSWNYITYG 641 K +L F QT HETTGGWP AP G YAWGYCF +E SS+YC P YPC GK YYGRGP+QLSWNY YG Sbjct: 54 KRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERN-PSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNY-NYG 126 HSP 2 Score: 80.8777 bits (198), Expect = 3.231e-37 Identity = 35/57 (61.40%), Postives = 48/57 (84.21%), Query Frame = 2 Query: 278 KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 KIISR MF+ +L++RN+ CPA+ FYTYDAF+ AAK+FP+FG +G+ +RKRE+AAF Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAF 60
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.212e-35 Identity = 47/117 (40.17%), Postives = 59/117 (50.43%), Query Frame = 2 Query: 110 CGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 CGS CP CCS G+CGLT YCC GC S C + MFE +L RN+ CP + FYTYDA+ A + +P FG +G++ RKRE+AAFF Sbjct: 26 CGSQAGNATCPNDLCCSSGGYCGLTVAYCCAGCVSQCRNC--------------------FFTESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFF 122 HSP 2 Score: 74.3294 bits (181), Expect = 2.212e-35 Identity = 37/75 (49.33%), Postives = 44/75 (58.67%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP----NYPCRGKYYGRGPIQLSWNYITYG 641 K +L FFAQT ET+G + WGYC E+ +SDYCDP +YPC YYGRGP+QL WNY YG Sbjct: 115 KRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNP-NSDYCDPKTKSSYPCVADYYGRGPLQLRWNY-NYG 187
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.982e-33 Identity = 46/75 (61.33%), Postives = 53/75 (70.67%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYITYG 641 K ++ F AQT HETTGGW AP G +AWGYCF +E G ASSDYC P+ +PC +YYGRGPIQLS NY YG Sbjct: 77 KREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNY-NYG 149 HSP 2 Score: 72.0182 bits (175), Expect = 1.982e-33 Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 2 Query: 266 GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 G + I+SR F+ +L +RND C A+ FYTYDAF+ AA AFP FG +G+ +KRE+AAF Sbjct: 23 GSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAF 83
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.137e-32 Identity = 45/75 (60.00%), Postives = 52/75 (69.33%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYITYG 641 K + F AQT HETTGGW AP G +AWGYCF +E GAA +DYC P+ +PC +YYGRGPIQLS NY YG Sbjct: 77 KRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAA-ADYCTPSAQWPCAPGKRYYGRGPIQLSHNY-NYG 149 HSP 2 Score: 70.4774 bits (171), Expect = 2.137e-32 Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 2 Query: 266 GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 G + IIS F+ +L +RND C A+ FYTYDAF+ AA AFP FG +G+ RKR++AAF Sbjct: 23 GSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF 83
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.003e-31 Identity = 42/75 (56.00%), Postives = 52/75 (69.33%), Query Frame = 3 Query: 432 EKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR--GKYYGRGPIQLSWNYITYGA 644 +++ F AQT HETTGGW AP G Y+WGYC+NRE G + DYC +PC KY+GRGPIQ+S+NY YGA Sbjct: 58 KEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQG-SPGDYCASSQQWPCAPGKKYFGRGPIQISYNY-NYGA 130 HSP 2 Score: 68.1662 bits (165), Expect = 3.003e-31 Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = 2 Query: 272 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 + +IS+ +FE +L +RND+ C A+ FYTY+AFI A K F AFG +G+ R +EIAAF Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAF 63
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.082e-27 Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 2 Query: 248 GTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 G +G +G II+R MFE +L +R D+ C FYTYDAFI+AA FP FG +GN+ R+RE+AAFF Sbjct: 19 GASGQQAGVGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFF 85 HSP 2 Score: 67.0106 bits (162), Expect = 3.082e-27 Identity = 32/67 (47.76%), Postives = 37/67 (55.22%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNY 629 + +L FF QT HETTGGW AP G +AWGYC E+ P YYGRGPIQL+ Y Sbjct: 78 RRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEI-----------TPSDPPYYGRGPIQLTHKY 133
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.824e-27 Identity = 40/77 (51.95%), Postives = 48/77 (62.34%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCD------PNYPCRGKYYGRGPIQLSWNYITYG 641 K ++ F AQ HETTGGW AP G YAWG C+ E+ SS YCD P YP + Y+GRGPIQ+SWN+ YG Sbjct: 101 KREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSS-YCDATDKQWPCYPGK-SYHGRGPIQISWNF-NYG 174 HSP 2 Score: 60.4622 bits (145), Expect = 8.824e-27 Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 2 Query: 248 GTAGDGG------ELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 G G GG + I+S +++ L +++D CPAR FYTY +F+ AA FP F +G RKRE+AAF Sbjct: 35 GGGGGGGYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAF 107
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.606e-25 Identity = 43/118 (36.44%), Postives = 62/118 (52.54%), Query Frame = 2 Query: 98 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 +A NCG C CCS+FG+CG T +YC +GCQS C G+ G G + +++ F + + + C + FYT AF+ A K +P F + G++ KREIAAFF Sbjct: 19 AAQNCG----CQPNVCCSKFGYCGTTDEYCGDGCQSG----PCRSGRGGGGSGGGGANVASVVTSSFFNGI-KNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFF 127 HSP 2 Score: 50.447 bits (119), Expect = 1.606e-25 Identity = 29/76 (38.16%), Postives = 40/76 (52.63%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLSWNYITYG 641 K ++ FFA HET +C+ E+ +++ YCDP +PC KYYGRGP+Q+SWNY YG Sbjct: 120 KREIAAFFAHATHETGH-------------FCYISEINKSNA-YCDPTKRQWPCAAGQKYYGRGPLQISWNY-NYG 180
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.794e-24 Identity = 45/117 (38.46%), Postives = 58/117 (49.57%), Query Frame = 2 Query: 107 NCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAG--DGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 NCG C CCS+FG+CG T YC GC+S G C GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA F Sbjct: 26 NCG----CAPNLCCSQFGYCGSTDAYCGTGCRS-------GPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGG-GCAGKNFYTRDSFINAANTFPNFANS----VTRREIATMF 126 HSP 2 Score: 56.6102 bits (135), Expect = 3.794e-24 Identity = 29/47 (61.70%), Postives = 33/47 (70.21%), Query Frame = 3 Query: 519 YCFNREVGAASSDYCDPN---YPCR-GK-YYGRGPIQLSWNYITYGA 644 +C+ E+ AS DYCD N YPC GK Y+GRGPIQLSWNY YGA Sbjct: 136 FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNY-NYGA 181
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.802e-24 Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = 2 Query: 269 ELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 ++G I++ +F ++L+ RND RCPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF Sbjct: 18 DVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFF 78 HSP 2 Score: 50.0618 bits (118), Expect = 3.802e-24 Identity = 29/64 (45.31%), Postives = 35/64 (54.69%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLS 620 K+++ FF QT HETTGG A G +A GYCF RE S +YGRGPIQL+ Sbjct: 71 KKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVREGNQMGSG-----------FYGRGPIQLT 122 The following BLAST results are available for this feature:
BLAST of FC930237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930237 ID=FC930237; Name=FC930237; organism=Citrus clementina; type=EST; length=730bpback to top |