FC930237
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.937e-24 Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 2 Query: 98 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 +A +CG C +CCS++G+CG +DYC GCQ+ P D A + + I++ + F L+ +D C A+ FYT DAF+ AA +P+FG +G+ KREIAAFF Sbjct: 24 AAQSCG----CASDQCCSKWGFCGTGSDYCGTGCQAG----------PCDVPATNDVSVASIVTPEFFAALVAQADDG-CAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFF 126 HSP 2 Score: 50.447 bits (119), Expect = 4.937e-24 Identity = 29/76 (38.16%), Postives = 39/76 (51.32%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR-GK-YYGRGPIQLSWNYITYG 641 K ++ FFA HET +C+ E+ S +YCD +PC GK YYGRGP+Q+SWN+ YG Sbjct: 119 KREIAAFFAHANHETIK-------------FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNF-NYG 180
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.374e-24 Identity = 35/59 (59.32%), Postives = 48/59 (81.36%), Query Frame = 2 Query: 275 GKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 G I++R++FE +L +RN+ CPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF Sbjct: 28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFF 86 HSP 2 Score: 48.1358 bits (113), Expect = 8.374e-24 Identity = 25/64 (39.06%), Postives = 34/64 (53.12%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLS 620 K+++ FF QT HET GG G + GYCF R++ + +YYGRGPIQL+ Sbjct: 79 KKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSD------------RYYGRGPIQLT 126
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIC_POPTR (Acidic endochitinase WIN6.2C (Fragment) OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.589e-23 Identity = 57/105 (54.29%), Postives = 66/105 (62.86%), Query Frame = 2 Query: 95 GSAGNCG---SGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGE-CDPDDGTAGDG--GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAF 391 GSA CG +CPGG CCS +GWCG T DYC +GCQS C+ G+ CD G GDG G L II + F+ LL++RND RC A FYTYDAFI AAK F Sbjct: 20 GSAEQCGRQAGDALCPGGLCCSFYGWCGTTVDYCGDGCQSQCDG---GDGCDGGGGGGGDGDDGYLSDIIPKSTFDALLKFRNDPRCHAVGFYTYDAFISAAKEF 121
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.845e-23 Identity = 35/59 (59.32%), Postives = 48/59 (81.36%), Query Frame = 2 Query: 275 GKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 G I++R++FE +L +RN+ CPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF Sbjct: 28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFF 86 HSP 2 Score: 46.9802 bits (110), Expect = 1.845e-23 Identity = 24/64 (37.50%), Postives = 34/64 (53.12%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLS 620 K+++ FF QT HET GG G + GYCF +++ + +YYGRGPIQL+ Sbjct: 79 KKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD------------RYYGRGPIQLT 126
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.395e-23 Identity = 46/119 (38.66%), Postives = 59/119 (49.58%), Query Frame = 2 Query: 98 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSN-CNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 +A NCG C CCS+FG+CG T YC +GCQS C G G G GG + F + ++ + C + FYT AF+ A A+P F + G E KREIAAFF Sbjct: 24 AAQNCG----CQPNFCCSKFGYCGTTDAYCGDGCQSGPCRSGGGGGGGGGGGGGGSGGANVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFF 138 HSP 2 Score: 47.7506 bits (112), Expect = 2.395e-23 Identity = 28/76 (36.84%), Postives = 40/76 (52.63%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLSWNYITYG 641 K ++ FFA HET +C+ E+ +++ YCD + +PC KYYGRGP+Q+SWNY YG Sbjct: 131 KREIAAFFAHVTHETGH-------------FCYISEINKSNA-YCDASNRQWPCAAGQKYYGRGPLQISWNY-NYG 191
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.401e-23 Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 272 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 +G I++ +F+ +L+ RND RC A FYTYDAFI AA +FP FG +G++T RK+EIAAFF Sbjct: 26 VGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFF 85 HSP 2 Score: 53.9138 bits (128), Expect = 2.401e-23 Identity = 30/64 (46.88%), Postives = 36/64 (56.25%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLS 620 K+++ FF QT HETTGG +P G YA GYCF RE + YYGRGPIQL+ Sbjct: 78 KKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNG-----------YYGRGPIQLT 129
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 8.958e-23 Identity = 35/60 (58.33%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 272 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 +G I++ +F ++L+ RND RCPA FYTYDAFI AA +FP FG SG++T R++EIAAFF Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFF 86 HSP 2 Score: 46.2098 bits (108), Expect = 8.958e-23 Identity = 27/64 (42.19%), Postives = 36/64 (56.25%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLS 620 ++++ FF QT HETTGG A + GYCF R+ +D D +YYGRGPIQL+ Sbjct: 79 RKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-----NDQSD-------RYYGRGPIQLT 128
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.165e-22 Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 2 Query: 248 GTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFF 451 G A G +G +I++ +F +L R++ +CPAR FYTYDAFI AA +FPAFG SG + +RE+AAFF Sbjct: 26 GAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFF 92 HSP 2 Score: 56.9954 bits (136), Expect = 1.165e-22 Identity = 28/65 (43.08%), Postives = 36/65 (55.38%), Query Frame = 3 Query: 426 VKEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLS 620 ++ +L FF QT HETTGG ++ WGYCF E+ A+S YYGRGPIQL+ Sbjct: 84 IRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATSP----------PYYGRGPIQLT 137
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.967e-22 Identity = 42/122 (34.43%), Postives = 59/122 (48.36%), Query Frame = 2 Query: 98 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSN-CNQVVCGECDPDDGTAGDGGELG---KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 SA NCG C CCS++G+CG DYC +GC+S C G G G GG G + + + F + ++ + C + FYT +F+ AA ++ F KREIAAFF Sbjct: 28 SAQNCG----CQSNMCCSKWGYCGTGKDYCGDGCRSGPCYGGGGGGGGGGGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFF 145 HSP 2 Score: 57.3806 bits (137), Expect = 1.967e-22 Identity = 32/76 (42.11%), Postives = 40/76 (52.63%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLSWNYITYG 641 K ++ FFA HET C+ E+ AS DYCD N +PC+ KYYGRGP+Q+SWNY YG Sbjct: 138 KREIAAFFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNY-NYG 199
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.967e-22 Identity = 42/123 (34.15%), Postives = 62/123 (50.41%), Query Frame = 2 Query: 98 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQS-----NCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 +A NCG C G CCS++G+CG T YC +GCQS + + G G AG G + +++ F ++ + C + FYT +F+ AA+++ F N KREIAAFF Sbjct: 26 AAQNCG----CQDGYCCSQWGYCGTTEAYCGQGCQSGPCWGSGGEAAAGMAGRKAG-AGAGVSVESVVTEAFFNG-IKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFF 142 HSP 2 Score: 52.7582 bits (125), Expect = 1.967e-22 Identity = 29/76 (38.16%), Postives = 40/76 (52.63%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLSWNYITYG 641 K ++ FFA HET C+ E+ A+ DYCD + +PC+ KYYGRGP+Q+SWN+ YG Sbjct: 135 KREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNF-NYG 196 The following BLAST results are available for this feature:
BLAST of FC930237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930237 ID=FC930237; Name=FC930237; organism=Citrus clementina; type=EST; length=730bpback to top |