FC930237
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.567e-22 Identity = 34/60 (56.67%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 272 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 +G I++ +F ++L+ RND RCPA FYTYDAFI AA +FP FG +G++T R++EIAAFF Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFF 86 HSP 2 Score: 46.2098 bits (108), Expect = 2.567e-22 Identity = 27/64 (42.19%), Postives = 36/64 (56.25%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLS 620 ++++ FF QT HETTGG A + GYCF R+ +D D +YYGRGPIQL+ Sbjct: 79 RKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-----NDQSD-------RYYGRGPIQLT 128
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 7.290e-22 Identity = 44/117 (37.61%), Postives = 63/117 (53.85%), Query Frame = 2 Query: 110 CGSGV---VCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 CG+ V C CCS GWCG DYC CQ C+ V G G + +++ +F+ + +R D CP++ FY+Y +F+ AA++FPAFG G+ RKRE+AAF Sbjct: 72 CGAAVGNPPCGQDRCCSVHGWCGGGNDYCSGSKCQYRCSSSVRGPRVALSGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAF 186 HSP 2 Score: 40.817 bits (94), Expect = 7.290e-22 Identity = 25/74 (33.78%), Postives = 35/74 (47.30%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC-DPNYPCRG--KYYGRGPIQLSWNYITYG 641 K ++ F A T+G D +AWG C +D+C ++PC KY RGPIQL+ N+ YG Sbjct: 180 KREVAAFLAHISQATSGERSDVEN-PHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNF-NYG 251
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.100e-21 Identity = 48/127 (37.80%), Postives = 59/127 (46.46%), Query Frame = 2 Query: 101 AGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDP----------DDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 A NCG C CCS FG+CG T YC G NC C P GT G G + I+S+ F+ ++ + CP + FYT AF+ A P FGN G+ KREIAAFF Sbjct: 27 AQNCG----CAPNLCCSNFGFCGTGTPYCGVG---NCQSGPCEGGTPTTPTTPTTPTTPGTGGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFF 143 HSP 2 Score: 48.521 bits (114), Expect = 2.100e-21 Identity = 30/74 (40.54%), Postives = 34/74 (45.95%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREV-GAASSDYCDPN----YPCRG--KYYGRGPIQLSWNY 629 K ++ FFA HETT C E G YCD + YPC KYYGRGP+QLSWNY Sbjct: 136 KREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNY 196
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.632e-21 Identity = 43/118 (36.44%), Postives = 58/118 (49.15%), Query Frame = 2 Query: 98 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 SA NCG C G CCS++G+CG DYC GCQ Q C P + I++ +++ + D C + FYT DAF+ A ++ FG G+E KREIAA F Sbjct: 22 SAQNCG----CAEGLCCSQYGYCGTGEDYCGTGCQ----QGPCTTASPPPSNNVNAD----ILTADFLNGIID-QADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAF 126 HSP 2 Score: 50.447 bits (119), Expect = 4.632e-21 Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 3 Query: 519 YCFNREVGAASSDYCDPN----YPCRGK--YYGRGPIQLSWNYITYG 641 +C+ E+ AS DYCD YPC Y+GRGPIQLSWN+ YG Sbjct: 136 FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNF-NYG 181
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 8.430e-20 Identity = 33/72 (45.83%), Postives = 40/72 (55.56%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYITYGA 644 K ++ F AQT HETTGGWP AP G Y E+G+ S Y+GRGPIQ+S+NY YGA Sbjct: 45 KREVAAFLAQTSHETTGGWPTAPDGPY--------ELGSTSD------------YFGRGPIQISYNY-NYGA 95 HSP 2 Score: 58.151 bits (139), Expect = 8.430e-20 Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 2 Query: 272 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 + +IS +FE +L +R FYTYDAFI AAK+FPAF +G+ +RKRE+AAF Sbjct: 1 VSSVISSSLFEKMLLHRG--------FYTYDAFIAAAKSFPAFATTGSTDVRKREVAAF 51
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.842e-19 Identity = 42/104 (40.38%), Postives = 55/104 (52.88%), Query Frame = 2 Query: 143 CCSRFGWCGLTTDYCCEGCQSNCNQVVCGEC-DPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 CCS+ G+CG + DYC GCQ+ G C DP +G DG I + F D + + CP + FYT F+EA A+P FG + RKREIAA+F Sbjct: 11 CCSQHGYCGNSYDYCGPGCQA-------GPCWDPCEG---DGTLTVSDIVTQEFWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYF 104 HSP 2 Score: 43.5134 bits (101), Expect = 1.842e-19 Identity = 24/71 (33.80%), Postives = 35/71 (49.30%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNY 629 K ++ +FA HET C+ E +++YC + YPC +Y+GRGP+QLSWNY Sbjct: 97 KREIAAYFAHVTHETGH-------------LCYIEERDGHANNYCQESQQYPCNPNKEYFGRGPMQLSWNY 154 The following BLAST results are available for this feature:
BLAST of FC930237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930237 ID=FC930237; Name=FC930237; organism=Citrus clementina; type=EST; length=730bpback to top |