FC930240

Overview
NameFC930240
Unique NameFC930240
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR3_MACFA (Pyrroline-5-carboxylate reductase 3 OS=Macaca fascicularis GN=PYCRL PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.584e-23
Identity = 66/206 (32.04%), Postives = 109/206 (52.91%), Query Frame = 2
Query:   95 LGFIGAGKMAESIVKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLG 709
            +GF+GAG+MA +I +G+ ++G +   RI  +  ++ +    F+++G +    N                        ++ P+++ + +LVSVAAGV L  L+E    ++R +RV+PN P  V E A VM+ G      + +L+  L  + G+     E   D  TGLSGSG A++    EALA+G +  G+P  LA  +A+QT+LG
Sbjct:   11 VGFVGAGRMAGAIAQGLIRAGKVEAQRIVASAPTD-RNLCHFQALGCQTTHSNQEVLQSCLLVIFATKPHILPAVVAEVAPVVTAEHILVSVAAGVSLSTLEELLPPNTRVLRVLPNLPCVVQEGAIVMARGRHVGSSETKLLQHLLEACGRCEEVPEAYVDIHTGLSGSGVAFVCAFSEALAEGAIKMGMPSSLAHRIAAQTLLG 215          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR2_BACSU (Pyrroline-5-carboxylate reductase 2 OS=Bacillus subtilis GN=proI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.375e-23
Identity = 67/208 (32.21%), Postives = 109/208 (52.40%), Query Frame = 2
Query:   95 LGFIGAGKMAESIVKGVAKSGVLPPDRICTAVHSNLKRR-DAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHS-RFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGA 712
            +GF+GAG MAE+++ G+ +SG+  P+ I     SN +R  +  E+  V+   D N                        IRP + + +L++SV AG+ ++ +Q + G     IRVMPNT +A+ ++AT  S+   A++ D      L  ++G     +E+  DA+T ++GSGPAY++  IEA+       GL +E A  L  QT+ GA
Sbjct:    4 IGFVGAGSMAEAMINGILQSGITKPEHIYITNRSNDERLIELKETYSVRPCRDKNEFFTHTDIIILAFKPKDAAESIDSIRPYI-KDQLVISVLAGLTIETIQHYFGRKLAVIRVMPNTSAAIRKSATGFSVSTEASKNDIIAAKALLETIGDATLVEERHLDAVTAIAGSGPAYVYRYIEAMEKAAQKVGLDKETAKALILQTMAGA 210          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR3_MOUSE (Pyrroline-5-carboxylate reductase 3 OS=Mus musculus GN=Pycrl PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.407e-23
Identity = 64/206 (31.07%), Postives = 109/206 (52.91%), Query Frame = 2
Query:   95 LGFIGAGKMAESIVKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLG 709
            +GF+GAG+MAE+I +G+ ++G +   ++  +  ++      F ++G +    N+                       ++ P+++ + ++VSVAAG+ L  ++     ++R +RV PN P  V E A VM+ G  A  +D EL+  L  + G+     E   D  TGLSGSG A++    EALA+G +  G+P  LA  +A+QT+LG
Sbjct:   11 VGFVGAGRMAEAIARGLIQAGKVEAKQVLASAPTD-NNLCHFRALGCQTTHSNHEVLQNCPLVIFATKPQVLPTVLAEVAPIVTTEHIIVSVAAGISLSTMEGLLPPNTRVLRVSPNLPCVVQEGAMVMARGHHAGNDDAELLQNLLEACGQCIEVPESYVDIHTGLSGSGVAFVCTFSEALAEGAIKMGMPSGLAHRIAAQTLLG 215          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR3_HUMAN (Pyrroline-5-carboxylate reductase 3 OS=Homo sapiens GN=PYCRL PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 9.818e-23
Identity = 66/206 (32.04%), Postives = 107/206 (51.94%), Query Frame = 2
Query:   95 LGFIGAGKMAESIVKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLG 709
            +GF+GAG+MA +I +G+ ++G +    I  +  ++ +    F+++G +    N                        ++ P+++ + +LVSVAAGV L  L+E    ++R +RV+PN P  V E A VM+ G      +  L+  L  + G+     E   D  TGLSGSG A++    EALA+G V  G+P  LA  +A+QT+LG
Sbjct:   11 VGFVGAGRMAGAIAQGLIRAGKVEAQHILASAPTD-RNLCHFQALGCRTTHSNQEVLQSCLLVIFATKPHVLPAVLAEVAPVVTTEHILVSVAAGVSLSTLEELLPPNTRVLRVLPNLPCVVQEGAIVMARGRHVGSSETNLLQHLLEACGRCEEVPEAYVDIHTGLSGSGVAFVCAFSEALAEGAVKMGMPSSLAHRIAAQTLLG 215          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR3_XENLA (Pyrroline-5-carboxylate reductase 3 OS=Xenopus laevis GN=pycrl PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.282e-22
Identity = 67/213 (31.46%), Postives = 107/213 (50.23%), Query Frame = 2
Query:   77 PAESFILGFIGAGKMAESIVKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQE-WTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGA 712
            P  S  +G IGAG+MA+ I++G+   G + P  +  +  ++ +  +  ++ G     DN +                      +I P ++   L++S+AAGV L+ L++     S+ IR+MPN P  + E A V S G  A E + ++   L  + G      +   D  TG+SGSG AY++   EALADG V  G+P  LA  + +QT+LGA
Sbjct:    5 PRVSLPVGCIGAGRMAQGILEGILHKGEITPQNVMVSAPTD-RNLEKLKARGCCTSHDNRSVVSNCRVVFLATKPHIIPSVLQEIYPKVTADHLIISMAAGVTLETLEKNLPPGSKVIRMMPNLPCVLQEGAIVFSRGRCAGEVEADVFESLVRTCGLCVEVPQSCIDIHTGVSGSGVAYVYTFAEALADGAVKMGMPSALARQIVAQTLLGA 216          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR3_BOVIN (Pyrroline-5-carboxylate reductase 3 OS=Bos taurus GN=PYCRL PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.857e-22
Identity = 66/206 (32.04%), Postives = 108/206 (52.43%), Query Frame = 2
Query:   95 LGFIGAGKMAESIVKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGH-SRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLG 709
            +GF+GAG+MAE+I +G+ ++G +  + +  +  S+ +    F ++G +    N                       +++ P ++ + +LVSVAAGV L  L++     +R +RV PN P  V E A VM+ G  A   + +L+  L  + G+     E   D  TGLSGSG A++    EALA+G +  G+P  LA  +A+QT+LG
Sbjct:   13 VGFVGAGRMAEAIAQGLIQAGKVEAEHVLASAPSD-RNLCRFRAMGCQTTHSNLEVLHSCSLVFFATKPHILPAVLVEVAPAVTAEHILVSVAAGVSLSTLEKLLPPMARVLRVSPNLPCIVQEGAMVMARGCCAGSYEAQLLRSLLEACGQCEEVPEAQVDVHTGLSGSGVAFVCAFSEALAEGAIKMGMPSGLAHRIAAQTLLG 217          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR_SHIFL (Pyrroline-5-carboxylate reductase OS=Shigella flexneri GN=proC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.873e-22
Identity = 66/207 (31.88%), Postives = 96/207 (46.38%), Query Frame = 2
Query:   95 LGFIGAGKMAESIVKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSR-FIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGA 712
            +GFIG G M ++I+ G+  SG + P +I     S  K     +  G+                              +I   L++  L+VS+AAGV L  L    GH R  IR MPNTP+ V    T ++     T ED   +  +F   G+     E +   + G+SGS PAY+F+ IEA+AD  V  G+PR  A   A+Q V+G+
Sbjct:    5 IGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGS 211          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR_ECOLI (Pyrroline-5-carboxylate reductase OS=Escherichia coli (strain K12) GN=proC PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.873e-22
Identity = 66/207 (31.88%), Postives = 96/207 (46.38%), Query Frame = 2
Query:   95 LGFIGAGKMAESIVKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSR-FIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGA 712
            +GFIG G M ++I+ G+  SG + P +I     S  K     +  G+                              +I   L++  L+VS+AAGV L  L    GH R  IR MPNTP+ V    T ++     T ED   +  +F   G+     E +   + G+SGS PAY+F+ IEA+AD  V  G+PR  A   A+Q V+G+
Sbjct:    5 IGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGS 211          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR_THET2 (Pyrroline-5-carboxylate reductase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=proC PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.364e-22
Identity = 67/205 (32.68%), Postives = 101/205 (49.27%), Query Frame = 2
Query:   95 LGFIGAGKMAESIVKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKL-LVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATE-EDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTV 703
            L F+G GKM  SI+KG  + G L P+ +     +  + R+  E  GV+ L+  +                        + P ++  +L  +S+ AG+    L     + R +R MPN    +GE++T ++    A E ED      LF +VG ++   E LFDA TG+S S PAY+ +  EALAD GV  G+PR LAL LA+  +
Sbjct:    3 LAFVGLGKMGRSILKGALERGFLRPEEVGVLGRTPERSRELAEPFGVRPLTRADLGMAERVLIAVQPRDFPA------LAPEIAHHRLGYISIMAGISTSVLARRLDNRRVVRAMPNLAVVIGESSTALTALKEAREAEDLAFARALFATVGDVYEIPEHLFDAFTGMSASAPAYLAVVAEALADAGVKMGMPRALALRLAADAL 201          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR_SCHPO (Pyrroline-5-carboxylate reductase OS=Schizosaccharomyces pombe GN=pro3 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.264e-19
Identity = 52/120 (43.33%), Postives = 74/120 (61.67%), Query Frame = 2
Query:  353 KLLVSVAAGVKLKDLQEWTGHS-RFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLG 709
            KL++S+ AG  +  LQ     S R IR+MPNT S + E+ +V+  G  ATEED +    +F  +G+  +  EKL DA T + GSGPA++   IEA+ DGGV  G+P   A  LA+QT++G
Sbjct:  106 KLILSILAGKTISSLQSMLDESTRVIRIMPNTASRIRESMSVICPGPNATEEDIKFAEWVFNGIGRSMKLPEKLIDAATAVCGSGPAFVATMIEAMTDGGVMMGIPFPQAQELAAQTMVG 225          
The following BLAST results are available for this feature:
BLAST of FC930240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
P5CR3_MACFA2.584e-2332.04Pyrroline-5-carboxylate reductase 3 OS=Macaca fasc... [more]
P5CR2_BACSU3.375e-2332.21Pyrroline-5-carboxylate reductase 2 OS=Bacillus su... [more]
P5CR3_MOUSE4.407e-2331.07Pyrroline-5-carboxylate reductase 3 OS=Mus musculu... [more]
P5CR3_HUMAN9.818e-2332.04Pyrroline-5-carboxylate reductase 3 OS=Homo sapien... [more]
P5CR3_XENLA1.282e-2231.46Pyrroline-5-carboxylate reductase 3 OS=Xenopus lae... [more]
P5CR3_BOVIN2.857e-2232.04Pyrroline-5-carboxylate reductase 3 OS=Bos taurus ... [more]
P5CR_SHIFL4.873e-2231.88Pyrroline-5-carboxylate reductase OS=Shigella flex... [more]
P5CR_ECOLI4.873e-2231.88Pyrroline-5-carboxylate reductase OS=Escherichia c... [more]
P5CR_THET26.364e-2232.68Pyrroline-5-carboxylate reductase OS=Thermus therm... [more]
P5CR_SCHPO2.264e-1943.33Pyrroline-5-carboxylate reductase OS=Schizosacchar... [more]

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Properties
Property NameValue
Genbank descriptionC34005C08EF PostHarvC1 Citrus clementina cDNA clone C34005C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930240 ID=FC930240; Name=FC930240; organism=Citrus clementina; type=EST; length=714bp
GGTAAGTGGAGATATTAGGGGAAAAAAATTTGTTCAGAACAGCGACGACG
AGGCGATTATGGACGCATTTCCTATTCCTGCCGAAAGCTTCATTCTAGGC
TTCATTGGAGCGGGCAAAATGGCGGAGAGCATTGTCAAAGGAGTGGCGAA
ATCGGGCGTGTTGCCGCCCGATCGTATCTGCACCGCCGTCCACTCTAATC
TCAAACGCCGTGATGCTTTTGAGTCCATCGGCGTCAAAGTATTATCCGAC
AATAACGCCGTTGTTGAATACAGCGATGTGGTTGTTTTCTCTGTGAAACC
GCAAGTAGTTAAAGATGTGGCCATGCAGATAAGGCCGCTGTTATCACGGA
AGAAGCTTTTGGTTTCTGTTGCTGCAGGAGTGAAATTGAAAGACCTTCAG
GAATGGACTGGTCACAGCCGGTTTATTAGAGTTATGCCTAATACACCTTC
TGCTGTAGGTGAGGCTGCAACAGTTATGAGCTTGGGAGGAACTGCAACAG
AAGAGGATGGGGAACTAATCGGTAAATTATTCGGATCAGTTGGCAAGATA
TGGCGAGCGGATGAGAAATTGTTTGATGCAATCACGGGCCTGAGTGGCAG
CGGTCCAGCATATATATTTTTAGCAATTGAAGCTTTGGCTGATGGAGGTG
TGGCTGCAGGGCTACCGCGAGAACTTGCACTTGGTCTAGCTTCTCAGACA
GTATTAGGAGCAGC
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