FC930240

Overview
NameFC930240
Unique NameFC930240
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR_AQUAE (Pyrroline-5-carboxylate reductase OS=Aquifex aeolicus GN=proC PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.043e-19
Identity = 64/211 (30.33%), Postives = 107/211 (50.71%), Query Frame = 2
Query:   95 LGFIGAGKMAESIV----KGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSR-FIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGA 712
            +G +G G M ++      K + K  ++  D++    +   +   AF S  VK L+DN+                        ++ L   K +++S+ AGV ++ +++  G  +  +RVMPN   AVG     ++  G  +EE+   + +L  S G ++R +E+LFDA T L+GSGPA++F  I+ALA  GV  G   E AL +A  TV+G+
Sbjct:   10 VGIVGFGNMGQAFALCFSKKLGKENIIVTDKVQEKRNLATEMGIAFAS-DVKFLADNSDVVLVAVKPKDSQEV---------LQKLKDYKGIILSIMAGVSIEKMEKILGKDKKIVRVMPNVNVAVGSGVMAITDNGNLSEEERSKVEELLLSCGTLYRIEERLFDAFTALAGSGPAFVFSFIDALALAGVHQGFSYEQALRIALDTVMGS 210          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR_MYCLE (Pyrroline-5-carboxylate reductase OS=Mycobacterium leprae GN=proC PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.586e-19
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 2
Query:  344 SRKKLLVSVAAGVKLKDLQ-EWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGA 712
            S +++LV+VAAGV +  L+ +    +  +R MPN  + VG   TV++ G   T +  E +  +F +VG +    E   DA+T +SGSGPAY FL +EAL D GVA GL R++A  LA+QT+ G+
Sbjct:   94 SAEQVLVTVAAGVTITYLESKLPAGTPVVRAMPNAAALVGAGVTVLAKGRFVTGQQFEDVLAMFDAVGGVLTVPESQMDAVTAVSGSGPAYFFLLVEALVDAGVAVGLTRQVATELAAQTMAGS 217          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR_CORML (Pyrroline-5-carboxylate reductase OS=Corynebacterium melassecola GN=proC PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.281e-18
Identity = 62/210 (29.52%), Postives = 100/210 (47.62%), Query Frame = 2
Query:   95 LGFIGAGKMAESIVKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLL---SRKKLLVSVAAGVKLKDLQEWTGHSR-FIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGA 712
            +  IG G++ E++V G+  +  + P  I     S  + ++  +  G+  ++DN+                       +I   L   S + ++VS+AAG+ +  ++E        +RVMPNTP  VG+  + ++ G     E  E +  L  +VG +    E   DA+T +SGS PAY+FL  EAL + GV  GLPR  A  LA  +  GA
Sbjct:    4 IAVIGGGQIGEALVSGLIAAN-MNPQNIRVTNRSEERGQELRDRYGILNMTDNSQAADEADVVFLCVKPKFIVEVLSEITGTLDNNSAQSVVVSMAAGISIAAMEESASAGLPVVRVMPNTPMLVGKGMSTVTKGRYVDAEQLEQVKDLLSTVGDVLEVAESDIDAVTAMSGSSPAYLFLVTEALIEAGVNLGLPRATAKKLAVASFEGA 212          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR_CORGL (Pyrroline-5-carboxylate reductase OS=Corynebacterium glutamicum GN=proC PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.281e-18
Identity = 62/210 (29.52%), Postives = 100/210 (47.62%), Query Frame = 2
Query:   95 LGFIGAGKMAESIVKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLL---SRKKLLVSVAAGVKLKDLQEWTGHSR-FIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGA 712
            +  IG G++ E++V G+  +  + P  I     S  + ++  +  G+  ++DN+                       +I   L   S + ++VS+AAG+ +  ++E        +RVMPNTP  VG+  + ++ G     E  E +  L  +VG +    E   DA+T +SGS PAY+FL  EAL + GV  GLPR  A  LA  +  GA
Sbjct:    4 IAVIGGGQIGEALVSGLIAAN-MNPQNIRVTNRSEERGQELRDRYGILNMTDNSQAADEADVVFLCVKPKFIVEVLSEITGTLDNNSAQSVVVSMAAGISIAAMEESASAGLPVVRVMPNTPMLVGKGMSTVTKGRYVDAEQLEQVKDLLSTVGDVLEVAESDIDAVTAMSGSSPAYLFLVTEALIEAGVNLGLPRATAKKLAVASFEGA 212          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR_VIBAL (Pyrroline-5-carboxylate reductase OS=Vibrio alginolyticus GN=proC PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.510e-18
Identity = 61/208 (29.33%), Postives = 91/208 (43.75%), Query Frame = 2
Query:   95 LGFIGAGKMAESIVKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHS-RFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGA 712
            + FIGAG M  +IV G+  +G  P   I     S  +R    +  G++  SDN                         ++ +    KL++S+AAG+    L +        +RVMPNTPS +G   + +      TE D     +L  +VGK+ W   E   + +   +GS PAY FL +EA+    +A G  +E A  L  Q  LGA
Sbjct:   12 IAFIGAGNMVRAIVSGLVANGY-PAQNITATAPSEARRLPLEQDFGIRTTSDNIQAATEADVVVLSVKPQMMADVCKPLQAIDFTNKLVISIAAGINCSRLDDMLATKLNLVRVMPNTPSQLGLGMSGLFAPIHVTEHDKAFAAELMEAVGKVCWVEQESGINNVIAAAGSAPAYFFLFMEAMQAEAIAQGFDKESARLLVQQAALGA 218          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR_CAEEL (Putative pyrroline-5-carboxylate reductase OS=Caenorhabditis elegans GN=F55G1.9 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.510e-18
Identity = 70/221 (31.67%), Postives = 101/221 (45.70%), Query Frame = 2
Query:   80 AESFILGFIGAGKMAESIVKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIR--PLLSRKKLLVSVAAGVKLKDLQEW----TGHSRFIRVMPNTPSAVGEAATVMSL--GGTATEEDG--ELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGA 712
            +ES    FIG G MA +I+KG    G  P   I   V +  K  + +  +G K +  N                         +   P+ SR + ++SV AGV LK L       +G++  +R+MPN  S++G  A+ M          +D   EL  +    VG +    E+ F+    + GS PA+ F+ IE+LADG VA GL R  A  LA+Q VLGA
Sbjct:   12 SESVPFVFIGGGNMAAAIIKGCQNKGFTPKSNIVIGVQTE-KSAEKWRQLGYKNVFTNTLEMLERYSTAIYVICVKPQVFEEVVSSWPVNSRPEFIISVMAGVPLKVLNAKLPFVSGNTTIVRLMPNVASSIGAGASTMCYEKNEKIMNQDSHIELAREFAECVGTVELIPERCFNPAMAIGGSSPAWTFMYIESLADGAVAQGLGRAEAKRLAAQAVLGA 231          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR_MYCTU (Pyrroline-5-carboxylate reductase OS=Mycobacterium tuberculosis GN=proC PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.119e-17
Identity = 47/124 (37.90%), Postives = 72/124 (58.06%), Query Frame = 2
Query:  344 SRKKLLVSVAAGVKLKDLQ-EWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGA 712
            S +++ V+V AG+ +   + +    +  +R MPN  + VG   T ++ G   T +  E +  LF +VG +    E   DA+T +SGSGPAY FL +EAL D GV  GL R++A  LA+QT+ G+
Sbjct:   95 SAEQVFVTVVAGITIAYFESKLPAGTPVVRAMPNAAALVGAGVTALAKGRFVTPQQLEEVSALFDAVGGVLTVPESQLDAVTAVSGSGPAYFFLLVEALVDAGVGVGLSRQVATDLAAQTMAGS 218          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR_HAEIN (Pyrroline-5-carboxylate reductase OS=Haemophilus influenzae GN=proC PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.373e-16
Identity = 61/209 (29.19%), Postives = 96/209 (45.93%), Query Frame = 2
Query:   92 ILGFIGAGKMAESIVKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSR-FIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGK-IWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGA 712
            ++ FIG G MA++I+ G+ K G  P ++I      N ++R  F ++ V    +N                         +  +    KLL+S+AAG+  + L       +  +RVMPNTP+ VGE    +      +E        L G+VG+ +W  DE    A+T  SGS PAY FL +EA+    +   +  + A  L  Q++LGA
Sbjct:    5 LIAFIGGGNMAQAIILGLLKQGY-PAEQIIVN-DPNEEKRAFFANLDVATSENNVGSAIKAEVVLLAVKPQMMAEVCSPLSAVDFSDKLLISIAAGISTERLNALIPSVKSIVRVMPNTPALVGEGMAGLFAPKNTSENYRTFAQDLLGAVGRTVWVNDETQMHAVTAASGSSPAYFFLMLEAMQKALIKMNIDEKTARELVQQSMLGA 211          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR_STAHJ (Pyrroline-5-carboxylate reductase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=proC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14
Identity = 53/195 (27.18%), Postives = 86/195 (44.10%), Query Frame = 2
Query:   95 LGFIGAGKMAESIVKGVAKSGVLPPDRICTAVHSNLKRRDAF-ESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRE 673
            L F GAG MA++I KG+  S  L    I     SN +    F E +GV+   D+                      A +I+P ++     +S+ AG+ +  +QE     +   R+MPNT + VG + T +S  G    +  E +  L  + G +   DE     +T ++GSGPA+++   E     G   GL ++
Sbjct:    3 LVFYGAGNMAQAIFKGIINSKKLKSHDIYLTNKSNEEALKNFAEELGVEYSYDDEKLLQDADYVFLGSKPYDFEKVAQRIQPYINENNRFISIMAGLPINYIQEQLQVENPIARIMPNTNAQVGHSVTGISFSGNFGPKSKEEVNDLVNAFGSVIEVDEDHLHQVTAITGSGPAFLYHVFEQYVKAGTDLGLEKD 197          
BLAST of FC930240 vs. ExPASy Swiss-Prot
Match: P5CR_YEAST (Pyrroline-5-carboxylate reductase OS=Saccharomyces cerevisiae GN=PRO3 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.863e-14
Identity = 46/121 (38.02%), Postives = 67/121 (55.37%), Query Frame = 2
Query:  353 KLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLP----RELALGLASQTV 703
            KLL+S+AAG  +  L ++T  S   RVM NTP+  G    V+S     ++E   L+ +L   VGK     EK  DA T L GSGPA++ L +E+L + G+  G+P    +E A+ +   TV
Sbjct:  109 KLLISLAAGWTIDQLSQYT--STVCRVMTNTPAKYGYGCAVVSYSADVSKEQKPLVNELISQVGKYVELPEKNMDAATALVGSGPAFVLLMLESLMESGLKLGIPLQESKECAMKVLEGTV 227          
The following BLAST results are available for this feature:
BLAST of FC930240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
P5CR_AQUAE5.043e-1930.33Pyrroline-5-carboxylate reductase OS=Aquifex aeoli... [more]
P5CR_MYCLE6.586e-1941.94Pyrroline-5-carboxylate reductase OS=Mycobacterium... [more]
P5CR_CORML7.281e-1829.52Pyrroline-5-carboxylate reductase OS=Corynebacteri... [more]
P5CR_CORGL7.281e-1829.52Pyrroline-5-carboxylate reductase OS=Corynebacteri... [more]
P5CR_VIBAL9.510e-1829.33Pyrroline-5-carboxylate reductase OS=Vibrio algino... [more]
P5CR_CAEEL9.510e-1831.67Putative pyrroline-5-carboxylate reductase OS=Caen... [more]
P5CR_MYCTU2.119e-1737.90Pyrroline-5-carboxylate reductase OS=Mycobacterium... [more]
P5CR_HAEIN1.373e-1629.19Pyrroline-5-carboxylate reductase OS=Haemophilus i... [more]
P5CR_STAHJ1.679e-1427.18Pyrroline-5-carboxylate reductase OS=Staphylococcu... [more]
P5CR_YEAST2.863e-1438.02Pyrroline-5-carboxylate reductase OS=Saccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionC34005C08EF PostHarvC1 Citrus clementina cDNA clone C34005C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930240 ID=FC930240; Name=FC930240; organism=Citrus clementina; type=EST; length=714bp
GGTAAGTGGAGATATTAGGGGAAAAAAATTTGTTCAGAACAGCGACGACG
AGGCGATTATGGACGCATTTCCTATTCCTGCCGAAAGCTTCATTCTAGGC
TTCATTGGAGCGGGCAAAATGGCGGAGAGCATTGTCAAAGGAGTGGCGAA
ATCGGGCGTGTTGCCGCCCGATCGTATCTGCACCGCCGTCCACTCTAATC
TCAAACGCCGTGATGCTTTTGAGTCCATCGGCGTCAAAGTATTATCCGAC
AATAACGCCGTTGTTGAATACAGCGATGTGGTTGTTTTCTCTGTGAAACC
GCAAGTAGTTAAAGATGTGGCCATGCAGATAAGGCCGCTGTTATCACGGA
AGAAGCTTTTGGTTTCTGTTGCTGCAGGAGTGAAATTGAAAGACCTTCAG
GAATGGACTGGTCACAGCCGGTTTATTAGAGTTATGCCTAATACACCTTC
TGCTGTAGGTGAGGCTGCAACAGTTATGAGCTTGGGAGGAACTGCAACAG
AAGAGGATGGGGAACTAATCGGTAAATTATTCGGATCAGTTGGCAAGATA
TGGCGAGCGGATGAGAAATTGTTTGATGCAATCACGGGCCTGAGTGGCAG
CGGTCCAGCATATATATTTTTAGCAATTGAAGCTTTGGCTGATGGAGGTG
TGGCTGCAGGGCTACCGCGAGAACTTGCACTTGGTCTAGCTTCTCAGACA
GTATTAGGAGCAGC
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