FC930244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: GUB_PAEMA (Beta-glucanase OS=Paenibacillus macerans PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.667e-17 Identity = 45/102 (44.12%), Postives = 57/102 (55.88%), Query Frame = 1 Query: 319 ARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDG 624 A +RST + YG + ++ K +F Y G + DEID EFLGKD T VQ NYYT G G E++ LGFD S+GFH Y W P I+W +DG Sbjct: 85 AEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQ-WDEIDIEFLGKDTTKVQFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDG 185
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: GUB_PAEPO (Beta-glucanase OS=Paenibacillus polymyxa GN=gluB PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.412e-16 Identity = 44/100 (44.00%), Postives = 55/100 (55.00%), Query Frame = 1 Query: 325 WRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDG 624 +RST + YG + ++ K +F Y G + DEID EFLGKD T VQ NYYT G G E+I +LGFD S FH Y W P I+W +DG Sbjct: 88 YRSTNNYGYGLYEVSMKPAKNTGIVSSFFTYTGPSHGTQ-WDEIDIEFLGKDTTKVQFNYYTNGVGGHEKIINLGFDASTSFHTYAFDWQPGYIKWYVDG 186
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: GUB_BACSU (Beta-glucanase OS=Bacillus subtilis GN=bglS PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.844e-16 Identity = 43/99 (43.43%), Postives = 55/99 (55.56%), Query Frame = 1 Query: 328 RSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDG 624 RS + YG + ++ K +F Y +G DEID EFLGKD T VQ NYYT G GN E+I DLGFD + +H Y W P+ I+W +DG Sbjct: 93 RSVQTYGYGLYEVRMKPAKNTGIVSSFFTYTGPTDGTP-WDEIDIEFLGKDTTKVQFNYYTNGAGNHEKIVDLGFDAANAYHTYAFDWQPNSIKWYVDG 190
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: GUB_BACAM (Beta-glucanase OS=Bacillus amyloliquefaciens GN=bglA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.844e-16 Identity = 43/99 (43.43%), Postives = 54/99 (54.55%), Query Frame = 1 Query: 328 RSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDG 624 RS + YG + ++ K +F Y EG DEID EFLGKD T VQ NYYT G GN E+ DLGFD + +H Y W P+ I+W +DG Sbjct: 90 RSVQTYGYGLYEVRMKPAKNTGIVSSFFTYTGPTEGTP-WDEIDIEFLGKDTTKVQFNYYTNGAGNHEKFADLGFDAANAYHTYAFDWQPNSIKWYVDG 187
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XYND_RUMFL (Xylanase/beta-glucanase OS=Ruminococcus flavefaciens GN=xynD PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.408e-16 Identity = 42/103 (40.78%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 316 GARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDG 624 G +R+ + YG + +Q K + +F Y + D DEID E LGK+ T VQ NYYT G G E+++DLGFD SE +H Y W P+ I W +DG Sbjct: 636 GGEFRTNNFYHYGYYECSMQAMKNDGVVSSFFTYTGPSD-DNPWDEIDIEILGKNTTQVQFNYYTNGQGKHEKLYDLGFDSSEAYHTYGFDWQPNYIAWYVDG 737
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: GUB_ORPSP (Beta-glucanase OS=Orpinomyces sp. (strain PC-2) GN=licA PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.107e-16 Identity = 48/120 (40.00%), Postives = 62/120 (51.67%), Query Frame = 1 Query: 277 DSNSITLTFDHRGGA----RWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDG 624 ++ + LT D G +R+ + YG F ++ K +F Y +G K DEID EFLG D T VQ NYYT G G+ E IH LGFD S+GFH Y W + I W +DG Sbjct: 73 ENGKLKLTIDRDGSGYTCGEYRTKNYYGYGMFQVNMKPIKNPGVVSSFFTYTGPSDGTK-WDEIDIEFLGYDTTKVQFNYYTNGQGHHEHIHYLGFDASQGFHTYGFFWARNSITWYVDG 191
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: GUB_BACLI (Beta-glucanase OS=Bacillus licheniformis GN=bg1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.038e-15 Identity = 42/99 (42.42%), Postives = 55/99 (55.56%), Query Frame = 1 Query: 328 RSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDG 624 RS + YG + ++ K +F Y +G DEID EFLGKD T VQ NYYT G GN E+I +LGFD + +H Y W P+ I+W +DG Sbjct: 94 RSVQTYGYGLYEVNMKPAKNVGIVSSFFTYTGPTDGTP-WDEIDIEFLGKDTTKVQFNYYTNGVGNHEKIVNLGFDAANSYHTYAFDWQPNSIKWYVDG 191
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.012e-14 Identity = 48/121 (39.67%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 277 DSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLE-GDKSQDEIDFEFLG---KDKTIVQTNYYTTGT--GNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLID 621 D S+ LT D R G+ + S +L+G FS+ I+ P T+G+ Y+S+ + +K+ DEIDFEFLG + + VQTN Y G+ REE ++L FD +E FH+Y I W I + +D Sbjct: 49 DGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHIIFFVD 169
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.321e-14 Identity = 46/113 (40.71%), Postives = 62/113 (54.87%), Query Frame = 1 Query: 289 ITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLG--KDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLID 621 + L+ DH G+ + S + G F I+ P +TSG+ YL+S + DE+DFEFLG + K VQTN +T G GNRE+ L FD S+ FH Y I W P I +D Sbjct: 61 VQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSK--GNTHDEVDFEFLGNKEGKLAVQTNVFTNGKGNREQKLALWFDPSKDFHTYAILWNPYQIVLYVD 171
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.726e-14 Identity = 43/119 (36.13%), Postives = 60/119 (50.42%), Query Frame = 1 Query: 277 DSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDG 624 + ++ L D G+ +S L+G+ LI+ GN++G YLSS + DEIDFEFLG + TN Y G GNRE+ F+ + GFH Y I W P + W +DG Sbjct: 45 NGTNLRLVLDKSAGSAIKSKVAHLFGSVEMLIKLVPGNSAGTVAAYYLSST--GSTHDEIDFEFLGNATGQPYTIHTNLYAQGKGNREQQFRPWFNPTNGFHNYTIHWNPSEVVWFVDG 161 The following BLAST results are available for this feature:
BLAST of FC930244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930244 ID=FC930244; Name=FC930244; organism=Citrus clementina; type=EST; length=624bpback to top |