FC930244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.726e-14 Identity = 52/157 (33.12%), Postives = 77/157 (49.04%), Query Frame = 1 Query: 163 VVTLELEMADPVVQSLHQTEPIKEIAIDYTPEACTHCADSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDG 624 V+++ L + ++ +H + ++I I + + + L D G+ ++S +LYG I+ GN++G YL S + DEIDFEFLG D IV TN YT G G+RE+ L FD + FH Y I W P I + IDG Sbjct: 8 VMSISLFLGLSILLVVHGKDFNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQ--GLTWDEIDFEFLGNVSGDPYIVHTNVYTQGKGDREQQFYLWFDPTAAFHNYSILWNPSHIVFYIDG 162
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.254e-14 Identity = 48/134 (35.82%), Postives = 67/134 (50.00%), Query Frame = 1 Query: 229 KEIAIDYTPEACTHCADSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLID 621 K+ + ++P D S TL D GA + S FL+G I+ +G++ G Y+SS ++DEIDFEFLG I+QTN Y G NREE L FD ++ FH Y I W I +++D Sbjct: 39 KDFFVTWSPTHVNTSNDGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSS--DQPNRDEIDFEFLGNVNGQPYILQTNVYAEGLDNREERIHLWFDPAKDFHTYSILWNIHQIVFMVD 170
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 2.943e-14 Identity = 45/125 (36.00%), Postives = 69/125 (55.20%), Query Frame = 1 Query: 259 ACTHCADSNSIT-LTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLID 621 A HC + +T L D+ GA + S +++L+G S I+ +G+++G Y+SS + +E DFEFLG + IVQTN Y G GNRE+ +L FD + FH Y I W + +++D Sbjct: 38 AMDHCVNEGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSS--DGPNHNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVD 160
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.943e-14 Identity = 45/122 (36.89%), Postives = 63/122 (51.64%), Query Frame = 1 Query: 268 HCADSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDG 624 H D ++L+ D G+ ++S FLYG ++ GN++G YL S + DEIDFEFLG + TN YT GTG++E+ L FD + FH Y I W P I + +DG Sbjct: 45 HDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS--PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDG 164
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: GUB_CLOTH (Beta-glucanase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=licB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.943e-14 Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = 1 Query: 298 TFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDG 624 ++ ++ G +R+ + F YG + ++ K +F Y + + DEID EFLGKD T VQ N+Y G G E +H+LGFD S+ FH Y +W PD I + +DG Sbjct: 87 SYPYKSG-EYRTKSFFGYGYYEVRMKAAKNVGIVSSFFTYTGPSDNNP-WDEIDIEFLGKDTTKVQFNWYKNGVGGNEYLHNLGFDASQDFHTYGFEWRPDYIDFYVDG 193
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.020e-14 Identity = 46/116 (39.66%), Postives = 64/116 (55.17%), Query Frame = 1 Query: 283 NSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLID 621 + + L D G ++S +L+G FS I+ P G+T+G+ YLSS + DEIDFEFLG I+QTN +T G GNRE+ L FD S+ +H Y I W I + +D Sbjct: 55 SELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNE--HDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVD 168
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: GUB_BREBE (Beta-glucanase OS=Brevibacillus brevis GN=bglBB PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.020e-14 Identity = 40/100 (40.00%), Postives = 54/100 (54.00%), Query Frame = 1 Query: 328 RSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQ-DEIDFEFLGKDKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLIDG 624 R+ + YG F ++ K + +F Y + D DEID EFLGKD T +Q NY+T G G E +DLGFD SE F+ Y +W D I W ++G Sbjct: 100 RTNDFYHYGLFEVSMKPAKVEGTVSSFFTYTGEWDWDGDPWDEIDIEFLGKDTTRIQFNYFTNGVGGNEFYYDLGFDASESFNTYAFEWREDSITWYVNG 199
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.557e-14 Identity = 48/121 (39.67%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 277 DSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLE-GDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGN--REEIHDLGFDCSEGFHEYVIKWGPDLIQWLID 621 D S+ LT D R G+ + S +L+G FSS I+ P ++G+ YLS+ + +K+ DEIDFEFLG + +QTN Y G+ + REE ++L FD +E FH+Y I W I + +D Sbjct: 49 DGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTEDFHQYSILWSLSHIIFYVD 169
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.564e-14 Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 1 Query: 283 NSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLID 621 + + L D G ++S +L+G FS I+ P G+T+G+ YLSS + DEIDFEFLG I+QTN +T G GNRE+ L FD S+ +H Y + W I + +D Sbjct: 54 SELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNE--HDEIDFEFLGNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVD 167
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.118e-13 Identity = 45/114 (39.47%), Postives = 62/114 (54.39%), Query Frame = 1 Query: 289 ITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLID 621 +TL+ D G+ ++S T +L+G I+ GN++G YL S EG + DEIDFEFLG D + TN YT G G++E+ L FD + FH Y I W P I +D Sbjct: 46 LTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKS-EGS-TWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPTANFHTYSILWNPQRIILTVD 157 The following BLAST results are available for this feature:
BLAST of FC930244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930244 ID=FC930244; Name=FC930244; organism=Citrus clementina; type=EST; length=624bpback to top |