FC930248
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930248 vs. ExPASy Swiss-Prot
Match: IF6_NATPD (Translation initiation factor 6 OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=eif6 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23 Identity = 71/198 (35.86%), Postives = 97/198 (48.99%), Query Frame = 1 Query: 76 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLSPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVND 669 R S VGVF+ T+ + LV ES S FE EL + V T+I G+ +G L VGN+NGLL TD+E L VV + ++A GN + N+ A H DL R+ I + L V V R +A VG+ ++ G L HP T+ E LD L L V GT+N G ++G+GL N+ Sbjct: 3 RAALSGSSYVGVFATATDEYLLVRPDIEESLQSEFETELD--VTAVPTTIAGSGTVGSLAVGNENGLLVTERVTDRERDRLETETGLPVV--ELPGNINAAGNVVLANNEGAFVHPDLSRDALSAIEEALSVPVERGRIADVQTVGTAAVVTDDGVLSHPKTTDEKLDFLEELFGVYADIGTINYGGPLVGSGLVANN 196
BLAST of FC930248 vs. ExPASy Swiss-Prot
Match: IF6_METB6 (Translation initiation factor 6 OS=Methanoregula boonei (strain 6A8) GN=eif6 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 65/195 (33.33%), Postives = 97/195 (49.74%), Query Frame = 1 Query: 85 FENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLSPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVND 669 F +GVF+++ ++ E F + L + ++ T+I G+ IIG L GN GL+ TD+EL L+ V + E ++A GN I ND A H DL E E I LGVEV T+ G G +N+G +VHP + +++ L T+ +P+ GT+N GS ++G GL VND Sbjct: 7 FAGDPNIGVFARVAGNIAVIPPEAPEEFRNAIREGLG--VELLVTTIQGSAIIGSLVAGNSRGLVVSGLATDEELAVLKKHRK----VMLLCETMNAAGNVIMANDTFAAVHPDLPAEVAEEIGAFLGVEVIHLTLGGVRTTGMAGVATNKGVIVHPRATAQEIARLETVSGIPVGTGTINMGSGLVGTGLLVND 195
BLAST of FC930248 vs. ExPASy Swiss-Prot
Match: IF6_METBU (Translation initiation factor 6 OS=Methanococcoides burtonii (strain DSM 6242) GN=eif6 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22 Identity = 64/188 (34.04%), Postives = 100/188 (53.19%), Query Frame = 1 Query: 103 VGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLSPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 666 +GVF+ T +V IG + +L + V+ T I G+ ++G L GN NG L +L+ + +V V+ + + L+A+GN I ND AL H ++ + E+I+ VLGV+V R T+AG VG +NRG LVHP + ++L L + +P+ GT N GS+ +G+GL N Sbjct: 13 LGVFATCTEDVAIVPIGTAGKAIDLLAEQLD--VKVISTLINGSIVVGSLSKGNSNGFLISRDANVSDLKDV------EVPVEVLPDMLTAVGNVILANDTAALVHPEMTDSSIEVISRVLGVDVHRGTIAGLGTVGMAGVVTNRGLLVHPMVTPDELSVLEDVFALPIELGTTNYGSQAVGSGLLAN 192
BLAST of FC930248 vs. ExPASy Swiss-Prot
Match: IF6_METBF (Translation initiation factor 6 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=eif6 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22 Identity = 65/195 (33.33%), Postives = 101/195 (51.79%), Query Frame = 1 Query: 103 VGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLSPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCG 687 +GVF+ T LV G + E L +V+T + G+ +IG L GN NG L + T E++ L V + + +L+A+GN + ND AL H +L + E+IA L VEV+R T+AG VG +N+G LVHP + +++ L L ++P+ GT N G++++G+GL N G Sbjct: 13 IGVFATCTEDVVLVPTGTKPETCAILEDSLD--ARIVETLVNGSVVIGALSRGNSNGFLYSYGTDAGEMKELTG-----VEAEILPGKLNAVGNIVLANDSAALVHPELSDKAIEVIASTLKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTASEIETLEKLFELPVNIGTTNFGTQMLGSGLLANSKNYLAG 200
BLAST of FC930248 vs. ExPASy Swiss-Prot
Match: IF6_HYPBU (Translation initiation factor 6 OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=eif6 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.533e-22 Identity = 71/196 (36.22%), Postives = 99/196 (50.51%), Query Frame = 1 Query: 103 VGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLSPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNI-LVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCG 687 +GV+ N LV +E E L + V++T I I G + GN NGLL P +EL +LR + D+V ++ +E R +ALGN IA N+ AL +D+ + I VLGVE Q NI VGS +NRGG+VHP S +++ L+++ V TVN G + AGL ND A G Sbjct: 13 IGVYIYANNKIALVPPTLTEKDKKKIEETLG--VEVIETKIADMIINGVMIAGNDNGLLLPRIVKPEELDYLREHIGDKVRLEILEVRQTALGNLIAANNRGALVSPLIDKAILDKIKSVLGVETIYQRHLANIPTVGSMIVVTNRGGVVHPGVSDDEIRILNSVFGVEFTTATVNFGLYFVKAGLVANDHGALVG 206
BLAST of FC930248 vs. ExPASy Swiss-Prot
Match: IF6_METTH (Translation initiation factor 6 OS=Methanobacterium thermoautotrophicum GN=eif6 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.343e-21 Identity = 67/200 (33.50%), Postives = 104/200 (52.00%), Query Frame = 1 Query: 67 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLSPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 666 M R+ + +GV+ +T++ L+ E F L + V+K SI G+ + G L VGN NG + + D+E+ L + + V RI ER +A+GN + ND+ A+A L + ++I DVL V+V T+AG +VGS + +NRG L++P S E++ + L V GTVN G +IGA N Sbjct: 1 MIRRINLSGNPNLGVYISVTDSVALIPQNTPEKFEGVLREALE--VEVLKVSISGSSLNGALAVGNSNGFVVSNQAMDREIDALAAAGVEAV---RIPERFTAVGNLVLANDNGAVASPLLSDDALQVIGDVLEVDVKVSTLAGLNIVGSMGAATNRGALLNPQASSEEIGIIEDTLGVEADVGTVNHGVTLIGACSVAN 195
BLAST of FC930248 vs. ExPASy Swiss-Prot
Match: IF6_SULSO (Translation initiation factor 6 OS=Sulfolobus solfataricus GN=eif6 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.664e-21 Identity = 69/201 (34.33%), Postives = 108/201 (53.73%), Query Frame = 1 Query: 76 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGNRIIGRLCVGNKNGLLSPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVE-VFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVND 669 RL + +GV+ N + ++ G S + +A V+ +++ I + ++G GN NG+L P +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E+II + LGVE + R +A I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND Sbjct: 5 RLSVFGTDNIGVYIYTNNKYTIIPRG----LDSETKENIAQVLGTELLEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEILNSKVTALGNTILANNKAALIYPEFNDIEEKIIKETLGVEDIKRGKIAQMITVGSVGVITNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIKSGLVAND 200
BLAST of FC930248 vs. ExPASy Swiss-Prot
Match: IF6_METPE (Translation initiation factor 6 OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=eif6 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.664e-21 Identity = 63/200 (31.50%), Postives = 100/200 (50.00%), Query Frame = 1 Query: 67 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLSPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 666 M L +E +G+F+++ +V S + + + L + +VKT + G+ IIG L GN G + E++ ++ + V +E ++A GN I ND +A H D+D T E I VLGV V R T++G VG +NRG LVH ++ +L L + +P+ GT+N GS ++G GL N Sbjct: 1 MIRTLAYEGDPHIGIFTRVLEDIAVVPPEASADYCAALKEALG--VTLVKTHVQGSSIIGSLVSGNSRGAIVSGLAYPDEIR----AIEEYREVMLLEGSMNAAGNVILANDQMAAVHPDMDNATIEQIHSVLGVPVIRLTLSGIKTVGMAGYATNRGILVHARSAGRELATLESTTDLPVGTGTINMGSGLVGTGLLAN 194
BLAST of FC930248 vs. ExPASy Swiss-Prot
Match: IF6_HALWD (Translation initiation factor 6 OS=Haloquadratum walsbyi (strain DSM 16790) GN=eif6 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.664e-21 Identity = 67/194 (34.54%), Postives = 96/194 (49.48%), Query Frame = 1 Query: 76 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLSPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGL 657 R F S VGVF++ T+ L+ + AEL IP V T+IGG+ +G L GN+NG+L T +E + + + V V + R++A GN I ND+ A H DL E E I L V V R +A VG+ +NRG L HP +L+ + L V GTVN G+ ++G+G+ Sbjct: 3 RASFAGSPYVGVFARATDDVLLLRSDVDDDTADAMAAELD--IPAVATTIGGSGTVGALATGNENGILVTSNVTMREKEAIETTA--SVSVTELPGRINAAGNVILANDYGAYVHPDLSTEAVESIESALNVPVARGKLADVRTVGTAAVATNRGVLCHPKAREPELEAIEDHLDVRADIGTVNYGAPLVGSGI 192
BLAST of FC930248 vs. ExPASy Swiss-Prot
Match: IF6_SULIY (Translation initiation factor 6 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=eif6 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.703e-21 Identity = 68/201 (33.83%), Postives = 107/201 (53.23%), Query Frame = 1 Query: 76 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGNRIIGRLCVGNKNGLLSPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQ-TVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVND 669 RL + +GV+ N + +V G S + + ++ +++ I + ++G GN NG+L P +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E+II + LGVE R+ +A I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVAND 200 The following BLAST results are available for this feature:
BLAST of FC930248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930248 ID=FC930248; Name=FC930248; organism=Citrus clementina; type=EST; length=688bpback to top |