FC930250

Overview
NameFC930250
Unique NameFC930250
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length682
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP2A1_YEAST (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Saccharomyces cerevisiae GN=PPH21 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.822e-37
Identity = 67/140 (47.86%), Postives = 98/140 (70.00%), Query Frame = 2
Query:  254 LSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALIDER 670
            LSE ++ +LC ++  +   + N+  I  P+ ICGD+HGQ+ DLL LF+ GG  P +NYLF+GDYVDRG  S+ET+  L+A K++YP    +LRGNHE   + +VYGFYDEC R++ +  +WK+FTD F+  P+ AL+D +
Sbjct:   83 LSEDDVARLCKMAVDVLQFEENVKPINVPVTICGDVHGQFHDLLELFKIGGPCPDTNYLFMGDYVDRGYYSVETVSYLVAMKVRYPHRITILRGNHESRQITQVYGFYDECLRKYGSANVWKMFTDLFDYFPITALVDNK 222          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PPX2_ARATH (Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana GN=PPX2 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 6.519e-37
Identity = 68/140 (48.57%), Postives = 102/140 (72.86%), Query Frame = 2
Query:  254 LSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALIDER 670
            L ESE++ LC+ +  I + + N+  ++AP+ ICGDIHGQ+ D+  LF+ GG  P++NYLFLGD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   + +VYGFYDEC R++ +V +W+  TD F+ L ++AL++ +
Sbjct:   17 LKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALVENK 156          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PPX1_PARTE (Serine/threonine-protein phosphatase PP-X homolog 1 OS=Paramecium tetraurelia GN=Ppx1 PE=3 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 6.519e-37
Identity = 68/139 (48.92%), Postives = 102/139 (73.38%), Query Frame = 2
Query:  254 LSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFN-VRLWKIFTDCFNCLPVAALIDE 667
            L E++++ LC  +K I   + N++ +EAP+ ICGDIHGQ+ DL+ LF+ GG  P +NYLFLGD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   + +VYGFYDEC R+++ + +WK  T+ F+ L +AA++++
Sbjct:   17 LKETDVKILCNKAKDILNNEDNVIRVEAPVTICGDIHGQFYDLMELFKVGGDVPETNYLFLGDFVDRGYNSVETFLLLLALKVRYPDQITLIRGNHESRQITQVYGFYDECLRKYSTLNVWKYCTEVFDYLALAAVVND 155          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP2A_ACECL (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Acetabularia cliftonii PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.514e-37
Identity = 64/138 (46.38%), Postives = 99/138 (71.74%), Query Frame = 2
Query:  254 LSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALID 664
            L E  +++L   ++ +F  + N+  ++ P+ +CGDIHGQ+ D++ LF+ GG  P +NYLF+GDYVDRG  S+ET+ LL++ K++YPE   +LRGNHE   + +VYGFYDEC R++ N  +W++FTD F+ LP+  LI+
Sbjct:   20 LPEENVKELVAKAREVFSNEKNVQPVKMPVTVCGDIHGQFHDMVELFKIGGTCPDTNYLFMGDYVDRGYNSVETVTLLVSLKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWQLFTDLFDFLPLTGLIE 157          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP2A_HELAN (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.452e-36
Identity = 72/160 (45.00%), Postives = 105/160 (65.62%), Query Frame = 2
Query:  194 LDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALIDER 670
            LD  I  L++ +  P         E+R LC  ++ I + + N+  ++ P+ +CGDIHGQ+ DLL LF  GG  P +NYLF+GDYVDRG  S+ET+ LL+A K++Y +   +LRGNHE   + +VYGF+DEC R++ N  +WK FTD F+ LP+ ALI+ +
Sbjct:    7 LDRQIEHLMDCKPLP--------EEVRTLCDQARTILVEEWNVQPVKCPVTVCGDIHGQFHDLLELFRIGGSAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFFDECLRKYGNANVWKHFTDLFDYLPLTALIESQ 158          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP2A2_SCHPO (Major serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Schizosaccharomyces pombe GN=ppa2 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.897e-36
Identity = 72/166 (43.37%), Postives = 110/166 (66.27%), Query Frame = 2
Query:  176 EMDPAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALIDER 670
            E + A L  V R + +++    K   LSE+++  LC  ++ +  ++ N+  +  P+ +CGDIHGQ+ DL+ LF+ GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++YP    +LRGNHE   + +VYGFYDEC R++ +  +WK FT+ F+  P+ ALI++R
Sbjct:   14 EANDATLGDVDRWIEQLK----KCEPLSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHDLMELFKIGGDVPDMNYLFMGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVYGFYDECLRKYGSANVWKHFTNLFDYFPLTALIEDR 175          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP4C_DICDI (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Dictyostelium discoideum GN=ppp4c PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.477e-36
Identity = 68/138 (49.28%), Postives = 101/138 (73.19%), Query Frame = 2
Query:  254 LSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALID 664
            + ESE+R LC  ++ I L + N+  +++P+ ICGDIHGQ+ DL  LF+ GG  P++NYLF+GD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   + +VYGFY+EC R++ +V +WK  T+ F+ L ++AL+D
Sbjct:   18 IKESEVRALCSKAREILLEEGNVQRVDSPVTICGDIHGQFYDLKELFKVGGDCPQTNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYEECVRKYGSVTVWKYCTEIFDYLSLSALVD 155          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP2A_HEVBR (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Hevea brasiliensis GN=PP2A PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.477e-36
Identity = 72/160 (45.00%), Postives = 105/160 (65.62%), Query Frame = 2
Query:  194 LDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALIDER 670
            LD  I  L+E +  P       E+  + LC  ++ I + + N+  ++ P+ +CGDIHGQ+ DL+ LF  GG  P +NYLF+GDYVDRG  S+ET+ LL+A K++Y +   +LRGNHE   + +VYGFYDEC R++ N  +WK FTD F+ LP+ ALI+ +
Sbjct:    7 LDRQIEHLMECKPLP-------EARGQTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQ 159          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PPX1_ARATH (Serine/threonine-protein phosphatase PP-X isozyme 1 OS=Arabidopsis thaliana GN=PPX1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.235e-36
Identity = 64/140 (45.71%), Postives = 103/140 (73.57%), Query Frame = 2
Query:  254 LSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALIDER 670
            LSESE++ LC+ +  I + + N+  ++AP+ +CGDIHGQ+ D++ LF+ GG  P++NYLF+GD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   + +VYGFYDEC R++ +  +W+  TD F+ + ++A+++ +
Sbjct:   17 LSESEVKALCLKAMEILVEESNVQRVDAPVTLCGDIHGQFYDMMELFKVGGDCPKTNYLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSSNVWRYCTDIFDYMSLSAVVENK 156          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP4C1_CAEEL (Serine/threonine-protein phosphatase 4 catalytic subunit 1 OS=Caenorhabditis elegans GN=pph-4.1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.207e-36
Identity = 68/138 (49.28%), Postives = 98/138 (71.01%), Query Frame = 2
Query:  254 LSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALID 664
            ++E +++ LC  ++ I   + N+  I++P+ ICGDIHGQ+ DL+ LF+ GG  P +NYLFLGD+VDRG  S+ET  LLLA K +YP+   L+RGNHE   + +VYGFYDEC R++ N  +WK  T+ F+ L +AA+ID
Sbjct:   45 IAEQDVKTLCAKAREILAEEGNVQVIDSPVTICGDIHGQFYDLMELFKVGGPVPNTNYLFLGDFVDRGFYSVETFLLLLALKARYPDRMMLIRGNHESRQITQVYGFYDECLRKYGNASVWKHCTEVFDYLSLAAVID 182          
The following BLAST results are available for this feature:
BLAST of FC930250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP2A1_YEAST3.822e-3747.86Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PPX2_ARATH6.519e-3748.57Serine/threonine-protein phosphatase PP-X isozyme ... [more]
PPX1_PARTE6.519e-3748.92Serine/threonine-protein phosphatase PP-X homolog ... [more]
PP2A_ACECL8.514e-3746.38Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A_HELAN1.452e-3645.00Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A2_SCHPO1.897e-3643.37Major serine/threonine-protein phosphatase PP2A-2 ... [more]
PP4C_DICDI2.477e-3649.28Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP2A_HEVBR2.477e-3645.00Serine/threonine-protein phosphatase PP2A catalyti... [more]
PPX1_ARATH3.235e-3645.71Serine/threonine-protein phosphatase PP-X isozyme ... [more]
PP4C1_CAEEL7.207e-3649.28Serine/threonine-protein phosphatase 4 catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionC34005D06EF PostHarvC1 Citrus clementina cDNA clone C34005D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930250 ID=FC930250; Name=FC930250; organism=Citrus clementina; type=EST; length=682bp
AATTCTAACTCACCGAGGATGCTCCGTTCTTCTTTATTCTTCTTTACCTT
TTCTTCTTCTTCTTCTTTACTTTGTTCTCTCCTTCTTTTAAGATATTCTT
GAGATTGAATTCGGAGTGGAAACACAAAAAAGAAGAGGGAAGGGAGAAGA
GAAGAAGAGTGGTGTGAGAGTTCAAGAAATGGATCCTGCTGTTCTTGACG
GTGTGATCAGGAGGCTTCTTGAAGTCAGAGGCAAACCAGGGAAGCAAGTG
CAGTTATCTGAGTCTGAGATTAGGCAGCTTTGTGTTGTCTCTAAGGGTAT
TTTCTTGAGGCAGCCCAACCTTTTAGAGATTGAAGCTCCTATCAAGATCT
GTGGAGACATTCATGGTCAGTATTCTGATCTTCTGAGGCTTTTTGAATAT
GGTGGGTTACCTCCTCGTTCCAATTACTTATTCTTGGGGGATTATGTAGA
TCGTGGAAAACAAAGTCTGGAAACAATATGCCTTCTCCTTGCATATAAAA
TAAAATATCCGGAGAACTTTTTCCTTCTTAGGGGAAACCATGAATGTGCT
TCGGTAAACCGTGTCTATGGATTTTATGATGAGTGTAAACGGAGATTCAA
TGTCAGACTTTGGAAAATATTCACTGATTGTTTCAACTGCCTGCCCGTGG
CAGCTCTTATTGATGAAAGATACTCTGCATGC
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