FC930250

Overview
NameFC930250
Unique NameFC930250
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length682
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP1_EMENI (Serine/threonine-protein phosphatase PP1 OS=Emericella nidulans GN=bimG PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.073e-75
Identity = 130/160 (81.25%), Postives = 146/160 (91.25%), Query Frame = 2
Query:  194 LDGVIRRLLEVRG-KPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDER 670
            LD +I RLLEVRG +PGKQVQL ESEIR LC  ++ IF+ QP LLE+EAPIKICGDIHGQY DLLRLFEYGG PP +NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFF+LRGNHECAS+NR+YGFYDECKRR+N++LWK FTDCFNCLP+AA+IDE+
Sbjct:    8 LDSIIDRLLEVRGSRPGKQVQLLESEIRYLCTKAREIFISQPILLELEAPIKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFVLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEK 167          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP1_NEUCR (Serine/threonine-protein phosphatase PP1 OS=Neurospora crassa GN=ppp-1 PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 3.536e-75
Identity = 129/160 (80.62%), Postives = 146/160 (91.25%), Query Frame = 2
Query:  194 LDGVIRRLLEVRG-KPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDER 670
            LD +I RLLEVRG +PGKQVQL E+EIR LC  ++ IF+ QP LLE+EAPIKICGDIHGQY DLLRLFEYGG PP +NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFF+LRGNHECAS+NR+YGFYDECKRR+N++LWK FTDCFNCLP+AA+IDE+
Sbjct:    9 LDSIIDRLLEVRGSRPGKQVQLLEAEIRYLCTKAREIFISQPILLELEAPIKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEK 168          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP12_DROME (Serine/threonine-protein phosphatase alpha-2 isoform OS=Drosophila melanogaster GN=Pp1-87B PE=1 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 3.536e-75
Identity = 130/164 (79.27%), Postives = 146/164 (89.02%), Query Frame = 2
Query:  194 LDGVIRRLLEVRG-KPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDERYSAC 682
            +D +I RLLEVRG +PGK VQLSE EIR LC+ S+ IFL QP LLE+EAP+KICGDIHGQY DLLRLFEYGG PP SNYLFLGDYVDRGKQSLETICLLLAYKIKY ENFFLLRGNHECAS+NR+YGFYDECKRR++++LWK FTDCFNCLPVAA++DE+   C
Sbjct:    7 IDSIISRLLEVRGARPGKNVQLSEGEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRYSIKLWKTFTDCFNCLPVAAIVDEKIFCC 170          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: GLC7A_CAEEL (Serine/threonine-protein phosphatase PP1-alpha OS=Caenorhabditis elegans GN=gsp-1 PE=2 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 4.618e-75
Identity = 129/164 (78.66%), Postives = 147/164 (89.63%), Query Frame = 2
Query:  194 LDGVIRRLLEVRG-KPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDERYSAC 682
            +D +I RLLEVRG +PGK V +SE+EIR LC  S+ IFL QP LLE+EAP+KICGDIHGQY+DLLRLFEYGG PP +NYLFLGDYVDRGKQSLETICLLLAYK+KYPENFFLLRGNHECAS+NR+YGFYDECKRRF+++LWK FTDCFNCLP+AALIDE+   C
Sbjct:    9 IDNLITRLLEVRGCRPGKPVTMSEAEIRALCHKSREIFLSQPILLELEAPLKICGDIHGQYNDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRGNHECASINRIYGFYDECKRRFSIKLWKTFTDCFNCLPIAALIDEKIFCC 172          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: GLC7A_CAEBR (Serine/threonine-protein phosphatase PP1-alpha OS=Caenorhabditis briggsae GN=gsp-1 PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 4.618e-75
Identity = 129/164 (78.66%), Postives = 147/164 (89.63%), Query Frame = 2
Query:  194 LDGVIRRLLEVRG-KPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDERYSAC 682
            +D +I RLLEVRG +PGK V +SE+EIR LC  S+ IFL QP LLE+EAP+KICGDIHGQY+DLLRLFEYGG PP +NYLFLGDYVDRGKQSLETICLLLAYK+KYPENFFLLRGNHECAS+NR+YGFYDECKRRF+++LWK FTDCFNCLP+AALIDE+   C
Sbjct:    9 IDNLITRLLEVRGCRPGKPVTMSEAEIRALCHKSREIFLSQPILLELEAPLKICGDIHGQYNDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRGNHECASINRIYGFYDECKRRFSIKLWKTFTDCFNCLPIAALIDEKIFCC 172          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP1_MEDVA (Serine/threonine-protein phosphatase PP1 OS=Medicago varia GN=PP1 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.029e-74
Identity = 128/165 (77.58%), Postives = 148/165 (89.70%), Query Frame = 2
Query:  179 MDPAVLDGVIRRLLEVR-GKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDER 670
            MD  VLD +I++L+  + G+  KQV L+E++IRQLC  +K IFL QPNLLE+EAPIKICGD+HGQ+SDLLRLFEYGG PP +NYLFLGDYVDRGKQS+ETICLLLAYKIKY ENFFLLRGNHECAS+NR+YGFYDECKRR+NVRLWK FTDCFNCLPVAAL+DE+
Sbjct:    1 MDDTVLDDIIKKLVSAKNGRTTKQVHLTEADIRQLCTSAKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRGNHECASINRIYGFYDECKRRYNVRLWKTFTDCFNCLPVAALVDEK 165          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP19_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 9 OS=Arabidopsis thaliana GN=TOPP9 PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.344e-74
Identity = 134/164 (81.71%), Postives = 145/164 (88.41%), Query Frame = 2
Query:  179 MDPAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDER 670
            M+  VLD +IRRLLE  GK GKQVQLSE EIRQLCV ++ IFL QPNLLE+ API+ICGDIHGQY DLLRLFEYGG PP +NYLFLGDYVDRGKQSLETICLLLAYKI+YP   FLLRGNHE A +NR+YGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDE+
Sbjct:    9 MEMGVLDDIIRRLLE--GKGGKQVQLSEVEIRQLCVNARQIFLSQPNLLELHAPIRICGDIHGQYQDLLRLFEYGGYPPSANYLFLGDYVDRGKQSLETICLLLAYKIRYPSKIFLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEK 170          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP11_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Nicotiana tabacum GN=NPP1 PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.755e-74
Identity = 130/165 (78.79%), Postives = 147/165 (89.09%), Query Frame = 2
Query:  179 MDPAVLDGVIRRLLEVRG-KPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDER 670
            ++  VLD +I RLLE R  +  +QVQLSE+EIR LC  S+ IFL+QPNLL+++ PIKICGDIHGQY DLLRLFEYGG PP +NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECAS+NR+YGFYDECKRRFNV+LWK FT+CFNCLPVAALIDE+
Sbjct:   15 IEAGVLDDIINRLLEFRNARTVRQVQLSEAEIRSLCSASREIFLQQPNLLDLKPPIKICGDIHGQYGDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVKLWKCFTECFNCLPVAALIDEK 179          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP1_PHAVU (Serine/threonine-protein phosphatase PP1 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.292e-74
Identity = 133/164 (81.10%), Postives = 147/164 (89.63%), Query Frame = 2
Query:  179 MDPAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDER 670
            MD AVLD VIRRLLE  GK GKQVQLSESEIRQLCV ++ IFL QP LLE+ AP+++CGDIHGQY DLLRLFEYGG PP +NYLFLGDYVDRGKQSLETICLLLAYKI+YP+  FLLRGNHE A +NR+YGFYDECKRRFNVRLWKIFTDCFNCLPV+ALID++
Sbjct:    1 MDKAVLDDVIRRLLE--GKGGKQVQLSESEIRQLCVHARQIFLSQPILLELRAPMRVCGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIFLLRGNHEEAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVSALIDDK 162          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP1B_DROME (Serine/threonine-protein phosphatase beta isoform OS=Drosophila melanogaster GN=flw PE=1 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 5.105e-74
Identity = 127/164 (77.44%), Postives = 149/164 (90.85%), Query Frame = 2
Query:  194 LDGVIRRLLEVRG-KPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDERYSAC 682
            +D +I+RLLE+R  + GKQVQ++E+E+R LC+ S+ IFL+QP LLE+EAP+ ICGDIHGQY+DLLRLFEYGG PP +NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECAS+NR+YGFYDECKRR+NV+LWK FTDCFNCLPVAA+IDE+   C
Sbjct:    8 VDSLIQRLLEMRSCRTGKQVQMTEAEVRGLCLKSREIFLQQPILLELEAPLIICGDIHGQYTDLLRLFEYGGFPPAANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNVKLWKTFTDCFNCLPVAAIIDEKIFCC 171          
The following BLAST results are available for this feature:
BLAST of FC930250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP1_EMENI2.073e-7581.25Serine/threonine-protein phosphatase PP1 OS=Emeric... [more]
PP1_NEUCR3.536e-7580.63Serine/threonine-protein phosphatase PP1 OS=Neuros... [more]
PP12_DROME3.536e-7579.27Serine/threonine-protein phosphatase alpha-2 isofo... [more]
GLC7A_CAEEL4.618e-7578.66Serine/threonine-protein phosphatase PP1-alpha OS=... [more]
GLC7A_CAEBR4.618e-7578.66Serine/threonine-protein phosphatase PP1-alpha OS=... [more]
PP1_MEDVA1.029e-7477.58Serine/threonine-protein phosphatase PP1 OS=Medica... [more]
PP19_ARATH1.344e-7481.71Serine/threonine-protein phosphatase PP1 isozyme 9... [more]
PP11_TOBAC1.755e-7478.79Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP1_PHAVU2.292e-7481.10Serine/threonine-protein phosphatase PP1 OS=Phaseo... [more]
PP1B_DROME5.105e-7477.44Serine/threonine-protein phosphatase beta isoform ... [more]

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Properties
Property NameValue
Genbank descriptionC34005D06EF PostHarvC1 Citrus clementina cDNA clone C34005D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930250 ID=FC930250; Name=FC930250; organism=Citrus clementina; type=EST; length=682bp
AATTCTAACTCACCGAGGATGCTCCGTTCTTCTTTATTCTTCTTTACCTT
TTCTTCTTCTTCTTCTTTACTTTGTTCTCTCCTTCTTTTAAGATATTCTT
GAGATTGAATTCGGAGTGGAAACACAAAAAAGAAGAGGGAAGGGAGAAGA
GAAGAAGAGTGGTGTGAGAGTTCAAGAAATGGATCCTGCTGTTCTTGACG
GTGTGATCAGGAGGCTTCTTGAAGTCAGAGGCAAACCAGGGAAGCAAGTG
CAGTTATCTGAGTCTGAGATTAGGCAGCTTTGTGTTGTCTCTAAGGGTAT
TTTCTTGAGGCAGCCCAACCTTTTAGAGATTGAAGCTCCTATCAAGATCT
GTGGAGACATTCATGGTCAGTATTCTGATCTTCTGAGGCTTTTTGAATAT
GGTGGGTTACCTCCTCGTTCCAATTACTTATTCTTGGGGGATTATGTAGA
TCGTGGAAAACAAAGTCTGGAAACAATATGCCTTCTCCTTGCATATAAAA
TAAAATATCCGGAGAACTTTTTCCTTCTTAGGGGAAACCATGAATGTGCT
TCGGTAAACCGTGTCTATGGATTTTATGATGAGTGTAAACGGAGATTCAA
TGTCAGACTTTGGAAAATATTCACTGATTGTTTCAACTGCCTGCCCGTGG
CAGCTCTTATTGATGAAAGATACTCTGCATGC
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