FC930250

Overview
NameFC930250
Unique NameFC930250
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length682
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP2A_TOBAC (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.333e-39
Identity = 71/138 (51.45%), Postives = 99/138 (71.74%), Query Frame = 2
Query:  254 LSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALID 664
            LSE E+R LC  +K I + + N+  +++P+ ICGDIHGQ+ DL  LF  GG  P +NYLF+GDYVDRG  S+ET+ LL+A K++YP+   +LRGNHE   + +VYGFYDEC R++ N  +WK FTD F+  P+ AL++
Sbjct:   26 LSEQEVRGLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVE 163          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP2A_BRANA (Serine/threonine-protein phosphatase PP2A catalytic subunit (Fragment) OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 5.333e-39
Identity = 70/138 (50.72%), Postives = 100/138 (72.46%), Query Frame = 2
Query:  254 LSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALID 664
            LSE ++R LC  +K I + + N+  +++P+ ICGDIHGQ+ DL  LF  GG+ P +NYLF+GDYVDRG  S+ET+ LL+  K++YP+   +LRGNHE   + +VYGFYDEC R++ N  +WK FTD F+ LP+ AL++
Sbjct:   23 LSEQQVRALCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGMCPDTNYLFMGDYVDRGYYSVETVTLLVGLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVE 160          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP2A1_EMENI (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Emericella nidulans GN=pphA PE=3 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 5.333e-39
Identity = 74/160 (46.25%), Postives = 108/160 (67.50%), Query Frame = 2
Query:  194 LDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALIDER 670
            LDG I  L+  +       QL+E ++R+LC  ++ +   + N+  ++ P+ +CGDIHGQ+ DL+ LF  GG  P +NYLF+GDYVDRG  S+ET+ LL+  KI+YP+   +LRGNHE   + +VYGFYDEC R++ N  +WK FTD F+ LP+ ALI+ +
Sbjct:   30 LDGWIESLMTCK-------QLAEEDVRRLCDRAREVLQEESNVQPVKCPVTVCGDIHGQFHDLMELFRIGGPNPDTNYLFMGDYVDRGYYSVETVTLLVCLKIRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIENQ 182          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP2AA_DICDI (Serine/threonine-protein phosphatase 2A catalytic subunit A OS=Dictyostelium discoideum GN=pho2A PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.096e-39
Identity = 71/140 (50.71%), Postives = 102/140 (72.86%), Query Frame = 2
Query:  254 LSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALIDER 670
            LSESE+R LC  ++ I  ++ N+  +  P+ +CGDIHGQ+ DL+ LF+ GG  P +NYLF+GDYVDRG  S+ET+ LL+A K++Y +   +LRGNHE   + +VYGFYDEC R++ N  +WK+FTD F+ LP+ ALI+ +
Sbjct:   20 LSESEVRDLCEKAREILSKESNVQPVRCPVTVCGDIHGQFHDLMELFKIGGNCPDTNYLFMGDYVDRGFYSVETVTLLVALKVRYKDRVTILRGNHESRQITQVYGFYDECLRKYGNPNVWKLFTDLFDYLPLTALIENQ 159          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP2A5_ARATH (Serine/threonine-protein phosphatase PP2A-5 catalytic subunit OS=Arabidopsis thaliana GN=PP2A5 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.096e-39
Identity = 77/167 (46.11%), Postives = 112/167 (67.07%), Query Frame = 2
Query:  179 MDPAV--LDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALIDER 670
            M PA   +D  I +L+E +        LSE+E++ LC  +K I + + N+  ++ P+ +CGDIHGQ+ DL+ LF  GG  P +NYLF+GDYVDRG  S+ET+ LL+A K++Y +   +LRGNHE   + +VYGFYDEC R++ N  +WK FTD F+ LP+ ALI+ +
Sbjct:    1 MPPATGDIDRQIEQLMECKA-------LSETEVKMLCEHAKTILVEEYNVQPVKCPVTVCGDIHGQFYDLIELFRIGGSSPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRLTILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQ 160          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP2A3_ARATH (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Arabidopsis thaliana GN=PP2A3 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.188e-38
Identity = 70/138 (50.72%), Postives = 99/138 (71.74%), Query Frame = 2
Query:  254 LSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALID 664
            LSE ++R LC  +K I + + N+  +++P+ ICGDIHGQ+ DL  LF  GG  P +NYLF+GDYVDRG  S+ET+ LL+  K++YP+   +LRGNHE   + +VYGFYDEC R++ N  +WKIFTD F+  P+ AL++
Sbjct:   27 LSEQQVRALCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVGLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 164          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP2A_MEDSA (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Medicago sativa GN=PP2A PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.552e-38
Identity = 69/138 (50.00%), Postives = 101/138 (73.19%), Query Frame = 2
Query:  254 LSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALID 664
            LSE ++++LC  +K I + + N+  +++P+ ICGDIHGQ+ DL  LF  GG  P +NYLF+GDYVDRG  S+ET+ LL+A K++YP+   +LRGNHE   + +VYGFYDEC R++ +  +WKIFTD F+  P+ AL++
Sbjct:   27 LSEQQVKELCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKIFTDLFDFFPLTALVE 164          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP2A2_ARATH (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Arabidopsis thaliana GN=PP2A2 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.552e-38
Identity = 74/160 (46.25%), Postives = 109/160 (68.12%), Query Frame = 2
Query:  194 LDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALIDER 670
            LD  I +L+E +        LSE+++R LC  ++ I + + N+  ++ P+ +CGDIHGQ+ DL+ LF  GG  P +NYLF+GDYVDRG  S+ET+ LL+A K++Y +   +LRGNHE   + +VYGFYDEC R++ N  +WK FTD F+ LP+ ALI+ +
Sbjct:    7 LDRQIEQLMECK-------PLSEADVRTLCDQARAILVEEYNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRLTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQ 159          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP2A5_TOBAC (Serine/threonine-protein phosphatase PP2A-5 catalytic subunit OS=Nicotiana tabacum GN=NPP5 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.647e-38
Identity = 70/138 (50.72%), Postives = 98/138 (71.01%), Query Frame = 2
Query:  254 LSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALID 664
            LSE ++R LC  +K I   + N+  +++P+ ICGDIHGQ+ DL  LF  GG  P +NYLF+GDYVDRG  S+ET+ LL+A K++YP+   +LRGNHE   + +VYGFYDEC R++ N  +WK FTD F+  P+ AL++
Sbjct:   28 LSEPDVRALCEKAKEILAEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGQCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRLTILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVE 165          
BLAST of FC930250 vs. ExPASy Swiss-Prot
Match: PP2A3_ORYSJ (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A3 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.647e-38
Identity = 70/140 (50.00%), Postives = 99/140 (70.71%), Query Frame = 2
Query:  254 LSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALIDER 670
            L+E E+R LC  +K I + + N+  +  P+ +CGDIHGQ+ DL+ LF  GG  P +NYLF+GDYVDRG  S+ET+ LL+A K++Y +   +LRGNHE   + +VYGFYDEC R++ N  +WK FTD F+ LP+ ALI+ +
Sbjct:   21 LAEGEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGEAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIENQ 160          
The following BLAST results are available for this feature:
BLAST of FC930250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP2A_TOBAC5.333e-3951.45Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A_BRANA5.333e-3950.72Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A1_EMENI5.333e-3946.25Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2AA_DICDI9.096e-3950.71Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A5_ARATH9.096e-3946.11Serine/threonine-protein phosphatase PP2A-5 cataly... [more]
PP2A3_ARATH1.188e-3850.72Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PP2A_MEDSA1.552e-3850.00Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A2_ARATH1.552e-3846.25Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A5_TOBAC2.647e-3850.72Serine/threonine-protein phosphatase PP2A-5 cataly... [more]
PP2A3_ORYSJ2.647e-3850.00Serine/threonine-protein phosphatase PP2A-3 cataly... [more]

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Properties
Property NameValue
Genbank descriptionC34005D06EF PostHarvC1 Citrus clementina cDNA clone C34005D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930250 ID=FC930250; Name=FC930250; organism=Citrus clementina; type=EST; length=682bp
AATTCTAACTCACCGAGGATGCTCCGTTCTTCTTTATTCTTCTTTACCTT
TTCTTCTTCTTCTTCTTTACTTTGTTCTCTCCTTCTTTTAAGATATTCTT
GAGATTGAATTCGGAGTGGAAACACAAAAAAGAAGAGGGAAGGGAGAAGA
GAAGAAGAGTGGTGTGAGAGTTCAAGAAATGGATCCTGCTGTTCTTGACG
GTGTGATCAGGAGGCTTCTTGAAGTCAGAGGCAAACCAGGGAAGCAAGTG
CAGTTATCTGAGTCTGAGATTAGGCAGCTTTGTGTTGTCTCTAAGGGTAT
TTTCTTGAGGCAGCCCAACCTTTTAGAGATTGAAGCTCCTATCAAGATCT
GTGGAGACATTCATGGTCAGTATTCTGATCTTCTGAGGCTTTTTGAATAT
GGTGGGTTACCTCCTCGTTCCAATTACTTATTCTTGGGGGATTATGTAGA
TCGTGGAAAACAAAGTCTGGAAACAATATGCCTTCTCCTTGCATATAAAA
TAAAATATCCGGAGAACTTTTTCCTTCTTAGGGGAAACCATGAATGTGCT
TCGGTAAACCGTGTCTATGGATTTTATGATGAGTGTAAACGGAGATTCAA
TGTCAGACTTTGGAAAATATTCACTGATTGTTTCAACTGCCTGCCCGTGG
CAGCTCTTATTGATGAAAGATACTCTGCATGC
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