FC930251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930251 vs. ExPASy Swiss-Prot
Match: PTGR1_HUMAN (Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25 Identity = 76/204 (37.25%), Postives = 112/204 (54.90%), Query Frame = 1 Query: 49 VLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLI--KNPQGLFKIHHTDVPLSYYTGILGMPGMTA*AGFYEICAPKKGEYIYVSATSGAVGQIVGQFAKMMGSYVVGSAGSRIKVELLKKQLGFDDAFN 654 ++ K LK + G+P +D +K + + ++ G +L++ L+L+ DPYMR ++ G + G VAKVV+S + KG +V + GW +S+ K+ + L +PLS G +GMPG+TA G EIC K GE + V+A +GAVG +VGQ AK+ G VVG+ GS KV L+K LGFD FN Sbjct: 1 MVRTKTWTLKKHFVGYPTNSDFELKTAELP-PLKNGE--VLLEALFLTVDPYMRVAAKRLKE--------GDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQK-LGFDVVFN 192
BLAST of FC930251 vs. ExPASy Swiss-Prot
Match: PTGR1_PIG (Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.464e-24 Identity = 75/200 (37.50%), Postives = 107/200 (53.50%), Query Frame = 1 Query: 61 KQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLI--KNPQGLFKIHHTDVPLSYYTGILGMPGMTA*AGFYEICAPKKGEYIYVSATSGAVGQIVGQFAKMMGSYVVGSAGSRIKVELLKKQLGFDDAFN 654 K LK + G+P ++ +K + ++ G +L++ L+L+ DPYMR G + G VA+V++S + F G +V GW +S+ KN + L +PLS G +GMPG+TA G +IC K GE + V+A +GAVG +VGQ AK+ G VVG+AGS KV LKK GFD AFN Sbjct: 5 KSWTLKKHFVGYPTPSNFELKTVELP-PLKNGE--VLLEALFLTVDPYMRIAAR--------KLKEGDMMMGEQVARVIESKNAAFPTGTIVVALLGWTTHSISDGKNLERLLAEWPDTLPLSLTLGTVGMPGLTAYFGLLDICGLKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVACLKK-YGFDVAFN 192
BLAST of FC930251 vs. ExPASy Swiss-Prot
Match: PTGR2_BOVIN (Prostaglandin reductase 2 OS=Bos taurus GN=PTGR2 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.410e-17 Identity = 68/196 (34.69%), Postives = 96/196 (48.98%), Query Frame = 1 Query: 91 GFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTP---GSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTA*AGFYE--ICAPKKGEYIYVSATSGAVGQIVGQFAKMMG-SYVVGSAGSRIKVELLKKQLGFDDAFN 654 G P + V+ ++ V EG + V+ LYLS DPYMR RM N+D TP ++G GV + +S H F KGD V + +I + L K+ D LSY+ G +GMPG+T+ G E + + VS +GA G + GQ +++G S VVG G+ K L +LGFD A N Sbjct: 16 GHPVAENFRVEEVNLPDCVNEGQ--VQVRTLYLSVDPYMRCRM--NEDTGSDYITPWQLSQVVDGGGVGIIEESKHTNFMKGDFVTSFYWPWQTKVILDGNILEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHITAGSNQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGTPEKCLFLTSELGFDAAIN 207
BLAST of FC930251 vs. ExPASy Swiss-Prot
Match: PTGR2_PONAB (Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.140e-17 Identity = 63/178 (35.39%), Postives = 88/178 (49.44%), Query Frame = 1 Query: 145 VEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTP---GSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTA*AGFYE--ICAPKKGEYIYVSATSGAVGQIVGQFAKMMG-SYVVGSAGSRIKVELLKKQLGFDDAFN 654 + EG + V+ LYLS DPYMR RM N+D TP ++G G+ + +S H KGD V + +I + L K+ D LSY+ G +GMPG+T+ G E + + VS +GA G + GQ ++G S VVG G+ K LL +LGFD A N Sbjct: 34 INEGQ--VQVRTLYLSVDPYMRCRM--NEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHLLGCSRVVGICGTHEKCVLLTSELGFDAAIN 207
BLAST of FC930251 vs. ExPASy Swiss-Prot
Match: PTGR2_MOUSE (Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 6.996e-17 Identity = 64/194 (32.99%), Postives = 97/194 (50.00%), Query Frame = 1 Query: 91 GFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDF-SSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTA*AGFYE--ICAPKKGEYIYVSATSGAVGQIVGQFAKMMG-SYVVGSAGSRIKVELLKKQLGFDDAFN 654 G P + V+ S+ + EG + V+ LYLS DPYMR +M+ + D+ + + +G G+ V +S H + KGD V + I + GL K+ D LSY+ G +GMPG+T+ G E + + + VS +GA G + GQ ++G S VVG G++ K L +LGFD A N Sbjct: 16 GNPVAENFRVEEFSLPDALNEGQ--VQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESKHQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVN 207
BLAST of FC930251 vs. ExPASy Swiss-Prot
Match: PTGR2_HUMAN (Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.996e-17 Identity = 63/178 (35.39%), Postives = 87/178 (48.88%), Query Frame = 1 Query: 145 VEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTP---GSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTA*AGFYE--ICAPKKGEYIYVSATSGAVGQIVGQFAKMMG-SYVVGSAGSRIKVELLKKQLGFDDAFN 654 + EG + V+ LYLS DPYMR RM N+D TP ++G G+ + +S H KGD V + +I + L K+ D LSY+ G +GMPG+T+ G E + + VS +GA G + GQ +G S VVG G+ K LL +LGFD A N Sbjct: 34 INEGQ--VQVRTLYLSVDPYMRCRM--NEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAIN 207
BLAST of FC930251 vs. ExPASy Swiss-Prot
Match: PTGR2_RAT (Prostaglandin reductase 2 OS=Rattus norvegicus GN=Ptgr2 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.193e-16 Identity = 64/194 (32.99%), Postives = 95/194 (48.97%), Query Frame = 1 Query: 91 GFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDF-SSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTA*AGFYEICAPKKG--EYIYVSATSGAVGQIVGQFAKMMG-SYVVGSAGSRIKVELLKKQLGFDDAFN 654 G P + V+ S+ + EG + V+ LYLS DPYMR +M+ D+ + + +G G+ + +S H + KGD V + I + GL K+ D LSY+ G +GMPG+T+ G E G + + VS +GA G + GQ ++G S VVG G+ K L +LGFD A N Sbjct: 16 GNPVAENFRVEEVSLPDTINEGQ--VRVRTLYLSVDPYMRCKMNEETGADYLAPWQLAQVADGGGLGVIEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHVSAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTHEKCLFLTSELGFDAAVN 207 The following BLAST results are available for this feature:
BLAST of FC930251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930251 ID=FC930251; Name=FC930251; organism=Citrus clementina; type=EST; length=655bpback to top |