FC930253

Overview
NameFC930253
Unique NameFC930253
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930253 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.503e-18
Identity = 48/184 (26.09%), Postives = 95/184 (51.63%), Query Frame = 2
Query:  161 ITVNPSSDRVPLIDMNKLVDPDSQDAELRRLHSACKHWGLFQLINHGAADESLRNMKKQAQEFFDLPLEEKKRWGQKPGSLEGYGQAFVISEEQKLDWNDMIFLRTLPHEIRKLDLWPEHPPKFRETLETYSEEMRKVATSLVRSMAMALELEAQEISDAYXEGLYEVRTTLYPPLSEX*AVIG 712
            +  N  S+ +P+I +   +D + +    R++  AC+ WG+FQ+++HG  D+ + +M + A+EFF LP EEK R+    G   G+  +  +  E   DW +++   + P   R    WP+ P  + +  E YS ++  +A +L+  ++ A+ LE + ++ A  +   ++    YP   +    +G
Sbjct:   32 VAYNEFSNDIPVISLAG-IDGEKRGEICRKIVEACEDWGIFQVVDHGVGDDLIADMTRLAREFFALPAEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSYPTNSRDYTRWPDKPEGWIKVTEEYSNKLMTLACTLLGVLSEAMGLELEALTKACVDMDQKIVVNYYPKCPQPDLTLG 214          
BLAST of FC930253 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.269e-18
Identity = 51/169 (30.18%), Postives = 94/169 (55.62%), Query Frame = 2
Query:  179 SDRVPLIDMNKLVDPDSQDAELR-RLHSACKHWGLFQLINHGAADESLRNMKKQAQEFFDLPLEEKKRWGQKPGSLEGYGQAFVISEEQKLDWNDMIFLRTLPHEIRKLDLWPEHPPKFRETLETYSEEMRKVATSLVRSMAMALELEAQEISDAYXEGLYEVRTTLYP 682
            SD VPLI ++ +    ++ A++R R+ +AC+ WG+FQ+I+HG   + + +M + A+EFF LP E+K R+    G   G+  +  +  E   DW +++   + P + R    WPE P  +   +E YSE +  ++ +L+  ++ A+ LE + ++ A  +   +V    YP
Sbjct:   40 SDAVPLISLHGI--DGARRAQIRDRVAAACEDWGIFQVIDHGVDADLIADMTRLAREFFALPAEDKLRYDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVKARDYGRWPEKPAGWCAVVERYSERLMGLSCNLMGVLSEAMGLETEALAKACVDMDQKVVVNFYP 206          
BLAST of FC930253 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.575e-18
Identity = 49/167 (29.34%), Postives = 91/167 (54.49%), Query Frame = 2
Query:  185 RVPLIDMNKLVDPDSQDAELRRLHSACKHWGLFQLINHGAADESLRNMKKQAQEFFDLPLEEKKRWGQKPGSLEGYGQAFVISEEQKLDWNDMIFLRTLPHEIRKLDLWPEHPPKFRETLETYSEEMRKVATSLVRSMAMALELEAQEISDAYXEGLYEVRTTLYPP 685
            +VP++D++    PD ++   R +  A + WG+FQ++NHG   E ++ ++K  +EFF+LP  EK+   ++ GS+EGYG+   +  +++    D I+L T P        WP+ PP +RE  E Y+  ++ ++  ++  ++  L L  + I +      Y +    YPP
Sbjct:    1 QVPVVDLSC---PD-EELVARTVVKASEDWGVFQVVNHGIPTELIQRLQKVGREFFELPEAEKRSCAREAGSVEGYGRRIELDIKKRKGIVDQIYLSTWPPSSVNYRYWPKSPPDYREVNEEYARHVKTLSEKIMEWLSEGLGLGREAIKEV-NGCWYVMNINHYPP 162          
BLAST of FC930253 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.575e-18
Identity = 49/186 (26.34%), Postives = 91/186 (48.92%), Query Frame = 2
Query:  161 ITVNPSSDRVPLIDMNK--LVDPDSQDAELRRLHSACKHWGLFQLINHGAADESLRNMKKQAQEFFDLPLEEKKRWGQKPGSLEGYGQAFVISEEQKLDWNDMIFLRTLPHEIRKLDLWPEHPPKFRETLETYSEEMRKVATSLVRSMAMALELEAQEISDAYXEGLYEVRTTLYPPLSEX*AVIG 712
            +  N  S+ +P+I + K  +      D   R++  AC+ WG+FQ++NHG     +  M + A+EFF LP EE  R+    G   G+  +  +  E   DW +++   + P   R    WP+ P  +R   + YSE++  +A  L+  ++ A++L+   +++A  +   +V    YP   +    +G
Sbjct:   29 VAYNDFSNEIPVISLTKESMKLAAVVDEICRKIVEACEDWGIFQVVNHGVDSNLISEMTRLAREFFALPPEENVRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPLRTRDYSRWPDKPEGWRSVTQEYSEKLMGLACKLLEVLSEAMDLDKDALTNACVDMDQKVVVNFYPQCPQPDLTLG 214          
BLAST of FC930253 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.995e-16
Identity = 48/196 (24.49%), Postives = 92/196 (46.94%), Query Frame = 2
Query:   68 LPVPSVQELAIQQPEAVPPRYIRDHV----VGD-----HVITVNPSSDRVPLIDMNKLVDPDSQDAE----LRRLHSACKHWGLFQLINHGAADESLRNMKKQAQEFFDLPLEEKKRWGQKP--GSLEGYGQAFVISEEQKLDWNDMIFLRTLPHEIRKLDLWPEHPPKFRETLETYSEEMRKVATSLVRSMAMAL 610
            LP   V+ L++    A+PP Y+R       +GD          + ++ R+P++D++  +D  SQ  +    +  + +A   WG+  +  HG   E +  ++     FF LP+++K+ +   P  G L+GYG     +   + +W D +F    P  +    LWP +PP +      +    R +A++L+  ++M L
Sbjct:    9 LPAARVEALSLSGLSAIPPEYVRPADERAGLGDAFDLARTHANDHTAPRIPVVDISPFLDSSSQQQQRDECVEAVRAAAADWGVMHIAGHGIPAELMDRLRAAGTAFFALPVQDKEAYANDPAAGRLQGYGSRLATNTCGQREWEDYLFHLVHPDGLADHALWPAYPPDYIAATRDFGRRTRDLASTLLAILSMGL 204          
BLAST of FC930253 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.163e-15
Identity = 47/184 (25.54%), Postives = 91/184 (49.46%), Query Frame = 2
Query:  161 ITVNPSSDRVPLIDMNKLVDPDSQDAELRRLHSACKHWGLFQLINHGAADESLRNMKKQAQEFFDLPLEEKKRWGQKPGSLEGYGQAFVISEEQKLDWNDMIFLRTLPHEIRKLDLWPEHPPKFRETLETYSEEMRKVATSLVRSMAMALELEAQEISDAYXEGLYEVRTTLYPPLSEX*AVIG 712
            +  N  S+ +P+I +   +D   +      +  AC+ WG+FQ+++HG   + L +M   A++FF LP +EK R+    G   G+  +  +  E   DW +++   + P + R    WP+ P ++R   E YS+ +  +A  L+  ++ A+ LE + ++ A  +   +V    YP   +    +G
Sbjct:   29 VPYNTFSNEIPVISLAG-IDGCRRAEICDEIVKACEDWGIFQVVDHGVDTKLLSDMTGLARDFFHLPTQEKLRFDMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIKARDYSRWPDKPNEWRAVTEEYSKVLMGLACKLLEVLSEAMGLEKEALTKACVDMDQKVVVNYYPKCPQPDLTLG 211          
BLAST of FC930253 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 56/177 (31.64%), Postives = 85/177 (48.02%), Query Frame = 2
Query:  188 VPLIDMNKLVDPDSQDAELRRLHSACKHWGLFQLINHGAADESLRNMKKQAQEFFDLPLEEKKRWGQKPGSL------EGYGQAFVISEEQKLDWNDMIFLRTLPHEIRKLDLWPEHPPKFRETLETYSEEMRKVATSLVRSMAMALELEAQEISDAY-----XEGLYEVRTTLYPP 685
            +P+ID +KL D   +   + R+ + C+ WG FQL+NHG   E L  +KK + E +   L E++  G KP  L      EG GQ         +DW D+  L       +  + WP +PP F ET++ Y EE+RK+A  ++  M   L  E   I  A+         +  + + YPP
Sbjct:    3 IPVIDFSKL-DGKERAETMARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECY--KLREERFEGSKPVQLLDTLVKEGDGQRL-----DNVDWEDVFVL-------QDDNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPP 164          
BLAST of FC930253 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14
Identity = 53/190 (27.89%), Postives = 95/190 (50.00%), Query Frame = 2
Query:  173 PSSDRVPLIDMNKLVDPDSQDAELRRLHSACKHWGLFQLINHGAADESLRNMKKQAQEFFDLPLEEKKRWGQKPGS------LEGYGQAFV----ISEEQKLDWNDMIFLRTLPHEIRKLDLWPEHPPKFRETLETYSEEMRKVATSLVRSMAMALELEAQEISDAYXEGLYEVRTTLYPPLSEX*AVIG 712
            P  + VP+ID+ +          ++++  AC+ +GLFQ+INHG  +E +    +  +EFF LP EEK+++  K  +      LE   + +V    +S E+ L W D +     P +   ++ WPE P K+RE +  YS E+RK+   ++  +   L L+     +   + +  + T  YPP  +  + +G
Sbjct:   30 PVGNDVPIIDLQQ-----HHHLLVQQITKACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLKLGYFDNELSQ-IQMMLTNYYPPCPDPSSTLG 213          
BLAST of FC930253 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14
Identity = 51/186 (27.42%), Postives = 82/186 (44.09%), Query Frame = 2
Query:  152 DHVITVNPSSDRVPLIDM-NKLVDPDSQDAELRRLHSACKHWGLFQLINHGAADESLRNMKKQAQEFFDLPLEEKKRWGQKPGSLEGYGQAFVISEEQKLDWNDMIFLRTLPHEIRK-------LDLWPEHPPKFRETLETYSEEMRKVATSLVRSMAMALELEAQEISDAYXEGLYEVRTTLYPP 685
            D   ++N     VPLID+ N L DP S     R +  ACK  G F ++NHG ++E + +  +    FFD+PL EK+R  +K G   GY  +F      KL W + +  R      R         D        F +  + Y E M  ++  ++  + ++L ++     + + E    +R   YPP
Sbjct:   49 DEKPSINVLELDVPLIDLQNLLSDPSSTLDASRLISEACKKHGFFLVVNHGISEELISDAHEYTSRFFDMPLSEKQRVLRKSGESVGYASSFTGRFSTKLPWKETLSFRFCDDMSRSKSVQDYFCDALGHGFQPFGKVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFFEENDSIMRLNYYPP 234          
BLAST of FC930253 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 50/161 (31.06%), Postives = 81/161 (50.31%), Query Frame = 2
Query:  152 DHVITVNPSSDRVPLIDMNKLVDPDSQDAELRRLHSACKHWGLFQLINHGAADESLRNMKKQAQEFFDLPLEEKKRWGQKPGSLEGYGQAFVISEEQKLDWNDMIFLRTLP-HEIRKLDLWPEHPPKFRETLETYSEEMRKVATSLVRSMAMALELEAQEI 631
            D + + + S + +PLID++     D   A L  +  AC  WG FQ+ NHG     L +++      F LP++ K +  +    + GYG A + S   K  W++   +   P H+ RK  LWP H  K+ E +E Y E M+K+A  L+     +L +E ++I
Sbjct:   38 DLLFSASASDETLPLIDLS-----DIHVATL--VGHACTTWGAFQITNHGVPSRLLDDIEFLTGSLFRLPVQRKLKAARSENGVSGYGVARIASFFNKKMWSEGFTVIGSPLHDFRK--LWPSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLGVEEKDI 189          
The following BLAST results are available for this feature:
BLAST of FC930253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
FL3H_DIACA2.503e-1826.09Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
FL3H_HORVU3.269e-1830.18Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
FLS_MATIN5.575e-1829.34Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
FL3H_VITVI5.575e-1826.34Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
LDOX_MAIZE3.995e-1624.49Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
FL3H_CALCH1.163e-1525.54Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
ACCO_MUSAC2.590e-1531.641-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
HY6H_HYONI1.679e-1427.89Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
GAOX1_ARATH8.331e-1427.42Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
G3OX2_ARATH1.421e-1331.06Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC34005D09EF PostHarvC1 Citrus clementina cDNA clone C34005D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930253 ID=FC930253; Name=FC930253; organism=Citrus clementina; type=EST; length=712bp
GGTAATTAATCAATAAACAGAAATGGAAGCTGAAGCAGCAGCGGCAACAC
TCAACCTTGAATGCTGTCTCCCAGTTCCAAGCGTGCAAGAGCTTGCAATC
CAACAGCCCGAAGCGGTGCCGCCTAGGTACATAAGAGATCATGTGGTTGG
TGACCACGTCATCACTGTTAATCCCTCTTCCGATCGTGTACCGTTGATTG
ATATGAACAAGTTAGTCGACCCTGATTCCCAAGATGCAGAGTTACGAAGA
TTACACTCTGCTTGCAAACACTGGGGCCTATTCCAGTTGATAAACCATGG
AGCAGCTGATGAATCGCTGAGGAACATGAAGAAGCAAGCTCAAGAGTTCT
TTGATCTTCCTTTAGAAGAAAAGAAGCGCTGGGGGCAGAAGCCAGGAAGT
CTTGAAGGCTATGGTCAAGCATTTGTCATCTCAGAAGAACAAAAACTTGA
TTGGAATGACATGATCTTCCTCAGAACTCTGCCCCATGAAATCAGGAAGT
TAGATTTATGGCCTGAACACCCCCCAAAATTCAGAGAGACTTTGGAGACT
TATTCTGAAGAGATGAGGAAAGTTGCCACTTCTTTAGTGAGGTCCATGGC
TATGGCACTTGAGCTTGAGGCTCAAGAAATCTCTGATGCTTACCNAGAAG
GACTGTATGAAGTGAGGACGACTTTGTATCCTCCTTTGTCTGAANCCTGA
GCGGTCATTGGG
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