FC930257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.836e-31 Identity = 69/158 (43.67%), Postives = 109/158 (68.99%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQQ---EATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSR 620 N T+RQVTF KRRNGLLKKA+ELSVLCDAEVAL++FS R +LYE++++S+ ATI+RY++ + N + N+QQ E + L ++I +++ R +LGE + + +EL+ LE +L++ + R+R+KK ++L EIE ++ E L +N L+ + Sbjct: 13 NATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSSIAATIERYQRRIKEIGNNHKRND-NSQQARDETSGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEK 169
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.622e-31 Identity = 71/165 (43.03%), Postives = 110/165 (66.67%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNP------GSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISE 629 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +++S+ T++RY+K + P E ++QQE KL+ + +Q R++LGE L L+ KEL++LE +L+ + ++R+ + + +L ++ ++ +E L N LR R+++ Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLAD 177
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 7.622e-31 Identity = 78/165 (47.27%), Postives = 105/165 (63.64%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN-NSVRATIDRYKKACADSSNPGSITE--ANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISENERA 641 N T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RGRLYE+A+ S++ TIDRYK D N +I + + + L +++ + R ILGE L + +EL+ LE +LEK + +R KK E+L +I ++++E L DN LR + E A Sbjct: 13 NPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLRGKHRNLEAA 177
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31 Identity = 73/165 (44.24%), Postives = 109/165 (66.06%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSS---NPGSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISENER 638 N NRQVTF KRRNGLLKKA+E+SVLCDA+VALIVFS++G+LYE+ +++S+ ++RY++ D P + + N E L+ ++ +Q R +LGE L TL KEL+ LE +LE + +RSKKN++L I ++K+E L+N N L+ ++ E E+ Sbjct: 13 NKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQ-KLMETEK 176
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31 Identity = 73/165 (44.24%), Postives = 109/165 (66.06%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSS---NPGSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISENER 638 N NRQVTF KRRNGLLKKA+E+SVLCDA+VALIVFS++G+LYE+ +++S+ ++RY++ D P + + N E L+ ++ +Q R +LGE L TL KEL+ LE +LE + +RSKKN++L I ++K+E L+N N L+ ++ E E+ Sbjct: 13 NKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQ-KLMETEK 176
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.300e-30 Identity = 73/164 (44.51%), Postives = 111/164 (67.68%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSIT-------EANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRI 623 N NRQVTF KRRNGLLKKAYELSVLCDAEVALIVFS+RG+LYE+ + +S+ T++RY+K C + G++T E ++QQE KL+ + +Q R+++GE L L+ K+L+ LE +L+ + ++RS + + +L ++ ++++E L N LR R+ Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTLERYQK-CNYGAPEGNVTSKEALVLELSSQQEYLKLKARYESLQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQRM 175
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.300e-30 Identity = 71/167 (42.51%), Postives = 107/167 (64.07%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEAN-----TQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISENER 638 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ + S+ T++RY+K + + N ++ E KL+ ++ +Q R++LGE L TL KEL+ LE +L+ + +RS + + +L ++ +++RE L N LR ++ E+ + Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSGQSMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRKLEESNQ 179
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.218e-30 Identity = 73/167 (43.71%), Postives = 113/167 (67.66%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--ANNSVRATIDRYKKACADSSNPGSITEANTQQ---EATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISENERA 641 NTTNRQVTF KRR GLLKKA+ELSVLCDAE+ LI+FSS G+L+EY A++S++ I+RY+K + ITE + Q E T+++ + ++Q R ++GE L++L EL +L +LE RVRS+KN+++L ++E + ++E L++ N +L ++E + A Sbjct: 13 NTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSASSSMKKIIERYQKV-----SGARITEYDNQHLYCEMTRMKNENEKLQTNIRRMMGEDLTSLTMTELHHLGQQLESASSRVRSRKNQLMLQQLENLRRKERILEDQNSHLCRLLAEQQAA 174
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.896e-30 Identity = 68/153 (44.44%), Postives = 103/153 (67.32%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANT-QQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYL 611 N+T+RQVTF KRRNGLLKKA ELS+LCDAEV L+VFSS GRLYE+++ +++ IDRY A + + +E Q+EA LR+Q+ +Q ++ ++GE LS L ++L+ LE RLE + +R +K+ +L +EIE + + + +N+ L Sbjct: 13 NSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTNMKTVIDRYTNAKEELLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIEL 165
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.896e-30 Identity = 76/187 (40.64%), Postives = 113/187 (60.43%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANT---QQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISENERAXXXXXXXXXXXXGGGHVYEPA 704 N NRQVTF KRR LLKKAYELSVLCDAEVALI+FS+RG+LYE+ ++ S+ T+++Y+K C S +I T QQE KL+ ++ +Q R++LGE L L KEL+ LE +L+ + ++RS + + +L ++ +++RE L N L+ R E+ +A G+ +PA Sbjct: 13 NKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSTSMLKTLEKYQK-CNFGSPESTIISRETQSSQQEYLKLKNRVEALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRFEESSQANQQQVWDPSNTHAVGYGRQPA 198 The following BLAST results are available for this feature:
BLAST of FC930257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930257 ID=FC930257; Name=FC930257; organism=Citrus clementina; type=EST; length=719bpback to top |