FC930257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.783e-30 Identity = 71/165 (43.03%), Postives = 108/165 (65.45%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNP------GSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISE 629 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +++S+ T++RY+K P E ++QQE KL+ + +Q R++LGE L L+ KEL+ LE +L+ + ++R+ + + +L ++ ++ +E L N LR R+++ Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLRLRLAD 177
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.783e-30 Identity = 71/171 (41.52%), Postives = 111/171 (64.91%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK--------ACADSSNPGSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISENERA 641 N NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS++G+L+EYAN+S + ++RY++ D ++P S T E KL+ ++ +Q +H +GE L +L+ KEL+NLE +L+ + +RS+KN+++ I ++K++ LQ N L ++ E E++ Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYERYSFAEKQLVPTDHTSPVSWT-----LEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKVKEREKS 178
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 4.941e-30 Identity = 73/162 (45.06%), Postives = 106/162 (65.43%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADS---SNPGSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISE 629 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ ++S + T+DRY+K S +N + N+ +E KL+ + +Q R++LGE L LN KEL+ LE +L+ + +VRS K + +L ++ ++ +E L N L ++ + Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDD 174
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 4.941e-30 Identity = 70/165 (42.42%), Postives = 102/165 (61.82%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATI----DRYKKACADSSNPGSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISENER 638 N NRQVTF KRR GLLKKA+E+SVLCDAEVAL+VFS +G+L+EY+ +S I +RY A P S N E +L+ +I ++ RH LGE L ++ KEL+NLE +L+ + +R++KN+++ I ++K+E +Q N L +I E E+ Sbjct: 13 NKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREK 177
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.453e-30 Identity = 66/157 (42.04%), Postives = 106/157 (67.52%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITE--ANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSR 620 N T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RG+LYE+A+ S + TI+RY+ ++ ++ + + +A L +++ ++ R +LGE L + +EL +LE +LE+ + +R +K ++L ++ + ++E++L+ DN LR + Sbjct: 13 NPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQKTIERYRTYTKENIGNKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREK 169
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.453e-30 Identity = 70/165 (42.42%), Postives = 102/165 (61.82%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATI----DRYKKACADSSNPGSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISENER 638 N NRQVTF KRR GLLKKA+E+SVLCDAEVAL+VFS +G+L+EY+ +S I +RY A P S N E +L+ +I ++ RH LGE L ++ KEL+NLE +L+ + +RS+KN+++ I ++++E +Q N L +I E E+ Sbjct: 13 NKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREK 177
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 8.427e-30 Identity = 66/166 (39.76%), Postives = 110/166 (66.27%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN--NSVRATIDRYKKACADSSNPGSITE--ANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISENERA 641 N NRQVTF KRRNGLLKKAYELSVLCDAE+AL++FS+RG+LYE+ + + + T+D+Y+K + +P + + Q+ KL+ ++ +Q+ RH+LGE LS ++ EL++LE +++ + ++RS K +L ++ ++ +E L N LR ++ +++ A Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRKHSYATMDPNQSAKDLQDKYQDYLKLKSRVEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRKLEDSDAA 178
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.101e-29 Identity = 69/162 (42.59%), Postives = 111/162 (68.52%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK---ACADSSNPGSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISE 629 N +RQVTF KRRNGLLKKAYELS+LCDAEVAL++FS GRLY+++++S + T++RY++ A D++ P S N QE L+ + +Q R++LGE L+ L EL+ LE+++ + + ++RS+K ++LL E+ ++++E LQ+ N L+ ++ E Sbjct: 13 NKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE 174
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.877e-29 Identity = 68/166 (40.96%), Postives = 110/166 (66.27%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQQ------EATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISEN 632 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ + S+ T+++Y+K C+ + ++ ++Q E KL+ ++ +Q R++LGE L +L KEL++LE +L+ + VR+ + + L+ ++ ++++E + N LR ++ E+ Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQK-CSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEES 177
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.877e-29 Identity = 68/166 (40.96%), Postives = 110/166 (66.27%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQQ------EATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISEN 632 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ + S+ T+++Y+K C+ + ++ ++Q E KL+ ++ +Q R++LGE L +L KEL++LE +L+ + VR+ + + L+ ++ ++++E + N LR ++ E+ Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQK-CSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEES 177 The following BLAST results are available for this feature:
BLAST of FC930257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930257 ID=FC930257; Name=FC930257; organism=Citrus clementina; type=EST; length=719bpback to top |