FC930257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 129.413 bits (324), Expect = 1.877e-29 Identity = 70/166 (42.17%), Postives = 104/166 (62.65%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS----VRATIDRYKKACADSSNPGSITEANT--QQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISENE 635 N NRQVTF KRR GLLKKA E+SVLCDAEV+LIVFS +G+L+EY++ S V +RY A P S A T E ++L+ +I ++ RH LGE L ++ K+L+NLE +LE + +RS+KN+++ + ++++E ++Q +N L +I E E Sbjct: 13 NKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERE 178
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.877e-29 Identity = 71/170 (41.76%), Postives = 108/170 (63.53%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK--------ACADSSNPGSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISENER 638 N NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS++G+L+EYA +S + ++RY++ D ++PGS T N KL+ ++ +Q + +GE L +LN KEL+NLE +L + +RS+KN+++ I ++K++ LQ N L ++ E E+ Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYERYSFAEKQLVPTDHTSPGSWTLEN-----AKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREK 177
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.217e-28 Identity = 70/165 (42.42%), Postives = 103/165 (62.42%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATI----DRYKKACADSSNPGSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISENER 638 N NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFSS+G+L+EY+ +S I DRY + N E KL+ ++ ++ R+ +GE L +L+ KEL++LE +L+ I +RS+KN+ + I ++K++ LQ+ N L +I E E+ Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREK 177
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.589e-28 Identity = 67/158 (42.41%), Postives = 107/158 (67.72%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACAD--SSNPGSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSR 620 N T+RQVTF KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYE+ +++S+ T++RY+K D S++ + ++ E L R+I ++ R ++GE L + +EL+ LE +L++ + ++R+KK ++L E E ++++E L +N L + Sbjct: 13 NATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTVERYQKRIQDLGSNHKRNDNSQQSKDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEK 170
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.076e-28 Identity = 63/145 (43.45%), Postives = 103/145 (71.03%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACAD-SSNPGSITEANT-QQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREI 584 N T+RQVTF KRR+GL KKA ELS+LCDAEV L+VFSS RLY++A++S+++ I+RY + D + +EA QQEA LR+Q+ +Q +R +LG+ LS L+ ++L+NLE++LE + +R +K+ +++ +I+ + ++ + Sbjct: 13 NATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSSMKSIIERYNETKEDPHQTMNASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRKVV 157
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.541e-28 Identity = 66/161 (40.99%), Postives = 111/161 (68.94%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSS---NPGSITEAN-TQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRIS 626 NT NRQVTF KRR GL+KKA EL++LCDA+V LIVFS GRLY+++++S+++ I+RY++A + NP ++EA Q+E T LR+Q++ + + NR +LGE +S ++L+ L+ ++E + +R+KK+++L EI + ++ +Q +N LR + + Sbjct: 13 NTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSSSMKSIIERYQEAGEEHCRLLNP--MSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKKFN 171
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.624e-28 Identity = 71/162 (43.83%), Postives = 105/162 (64.81%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADS---SNPGSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISE 629 N NRQVTF KRRNGLLKKAYELSVLCDAEV+LIVFS+RG+LYE+ + S + T++RY+K S +N + N+ +E KL+ + +Q R++LGE L LN KEL+ LE +L+ + +VR K + +L ++ ++ +E L + N L ++ + Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLED 174
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.624e-28 Identity = 68/165 (41.21%), Postives = 102/165 (61.82%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATI----DRYKKACADSSNPGSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISENER 638 N NRQVTF KRR+GLLKKA+E+SVLCDAEVAL++FSS+G+L+EY+ +S I DRY + N E KL+ ++ ++ R+ +GE L +L+ KEL++LE +L I +RS+KN+ + I ++K++ LQ+ N L +I E E+ Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKEREK 177
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.030e-27 Identity = 63/159 (39.62%), Postives = 108/159 (67.92%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSS---NPGSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRI 623 ++T+RQVTF KRR GL+KKA EL++LCDAEV LI+FSS G+LY++A++S+++ IDRY K+ + NP S + Q+EA LR+++ +Q +R ++GE L+ L+ EL +LE ++E + +R +K ++L EI+ + ++ + +N+ L ++ Sbjct: 13 DSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMKSVIDRYNKSKIEQQQLLNPASEVKF-WQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKV 170
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.757e-27 Identity = 65/162 (40.12%), Postives = 105/162 (64.81%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITE--ANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISENE 635 N RQVTF KR++GLLKKAYELSVLCDAEV+LI+FS+ G+LYE++N V TI+RY + C D+ E +QE TKL+ + + +R+++GE L ++ KEL+ LE +LE + R +K ++++ ++E + ++E +L + N L+ +++ Sbjct: 13 NKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVGVGRTIERYYR-CKDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLETEDHD 173 The following BLAST results are available for this feature:
BLAST of FC930257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930257 ID=FC930257; Name=FC930257; organism=Citrus clementina; type=EST; length=719bpback to top |