FC930257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.665e-18 Identity = 51/143 (35.66%), Postives = 87/143 (60.84%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN--NSVRATIDRYKKACADSSNPGSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKR 578 N TNRQVT+ KRRNGL KKA+ELSVLCDA+V++I+ SS +L+EY + + + D+Y+KA + S Q+ KL R ++ R +GE+L+ L ++++ NL ++ + +R +K +++ +I+ +K+ Sbjct: 13 NQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKAV--GVDLWSSHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQIDTSKKK 153
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17 Identity = 52/156 (33.33%), Postives = 90/156 (57.69%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV--RATIDRYKKACADSS-NPGSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLN-FKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYL 611 + T RQVTF KRR G LKKA EL+VLCDA+V ++VFS +G+L+++ + V RY+ ++ + + E T+LR +I +++ R GE LS+++ EL L+ +LE + +V ++K+E++ ++E M + + N +L Sbjct: 13 DATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPVILMELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFL 168
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17 Identity = 53/160 (33.12%), Postives = 97/160 (60.62%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN-NSVRATIDRYKKACADSSNPGSITEANTQQEATKLRRQIREIQNLNRHILGEA-LSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISE 629 N ++RQVTF KRRNGL++KA +LS+LC++ +A++V S G+LY+ A+ +++ IDRY+ AD EA E T+ ++E+ + + L E+ + + L +LE +LE + R++K E+++ E++ ++K E L+ +N L S++ + Sbjct: 13 NKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRYEIHHADE------LEALDLAEKTRNYLPLKELLEIVQSKLEESNVDNASVDTLISLEEQLETALSVTRARKTELMMGEVKSLQKTENLLREENQTLASQVGK 166
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16 Identity = 54/165 (32.73%), Postives = 87/165 (52.73%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACAD-SSNPGSI----TEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRSRISENE 635 N+TNRQVTF KRR G+LKKA E+ VLCDAEV +++FSS G+L +Y + + +N G I + E +++++ +Q RH+ GE L++L KEL +E L G +R K ++ ++ E L++++ L R+ + E Sbjct: 13 NSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDK----MMDHWRMHKRNEKMLEDEHKMLAFRVHQQE 173
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.886e-13 Identity = 49/133 (36.84%), Postives = 75/133 (56.39%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVRATIDRYKKACADSSNPGSITEANTQQEATKLRRQIREIQNLNR----HILGEALSTLNFKELKNLEARLEKGIGRVRSKK 536 N TNRQVTF KRRNG++KKA EL+VLCDA+V+L++ SS +L+ Y + S++ D Y+K G + + R++ E+ +L R +G L L EL L+ +E+ I ++R+KK Sbjct: 13 NKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVSLKKMYDEYQKI------EGVDLWRKQWERMQEQHRKVLELNSLLRREISRRMGGDLEGLTLVELSALQQEMEEAIIQIRNKK 139
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: SRFC_DICDI (Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.924e-12 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY 326 N NRQ TF KR+NGL+KKA ELS+LCD E+A+IVFSS +L++Y++ + + RY Sbjct: 15 NERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFSSNNKLFQYSSRDMDKLLIRY 71
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MEF2B_HUMAN (Myocyte-specific enhancer factor 2B OS=Homo sapiens GN=MEF2B PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.924e-12 Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 3 Query: 165 NRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY 326 NRQVTF KR+ GL+KKAYELSVLCD E+ALI+F+S RL++YA+ + + +Y Sbjct: 16 NRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYASTDMDRVLLKY 69
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.924e-12 Identity = 46/142 (32.39%), Postives = 76/142 (53.52%), Query Frame = 3 Query: 156 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN---NSVRATIDRYKKACADSSNPGSITEANTQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFME 572 N T RQ TF KRR+GL KKA EL+VLCDA++ L++FS+ G+LY + + SVR ++RY+ + + + E K+ ++ R + + L+ LE LE + +VRS+K+ + EI +++ Sbjct: 13 NPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYE--ATTHTKVWADIRQERRAELEKVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQ 152
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MEF2_DROME (Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster GN=Mef2 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.035e-11 Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 3 Query: 165 NRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY 326 NRQVTF KR+ G++KKAYELSVLCD E+ALI+FSS +LY+YA+ + + +Y Sbjct: 16 NRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKY 69
BLAST of FC930257 vs. ExPASy Swiss-Prot
Match: MEF2A_PIG (Myocyte-specific enhancer factor 2A OS=Sus scrofa GN=MEF2A PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.035e-11 Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 3 Query: 165 NRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKK--ACADSSNPGSITEANTQQE 389 NRQVTF KR+ GL+KKAYELSVLCD E+ALI+F+S +L++YA+ + + +Y + +S I EA ++E Sbjct: 16 NRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNEPHESGTNSDIVEALNKKE 92 The following BLAST results are available for this feature:
BLAST of FC930257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930257 ID=FC930257; Name=FC930257; organism=Citrus clementina; type=EST; length=719bpback to top |