FC930259 | Citrus Genome Database

Overview


Name	FC930259
Unique Name	FC930259
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	679

Libraries


Library Name	Type
PostHarvC1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENOB_RABIT (Beta-enolase OS=Oryctolagus cuniculus GN=ENO3 PE=1 SV=4)

HSP 1 Score: 226.098 bits (575), Expect = 1.314e-61
Identity = 125/180 (69.44%), Postives = 143/180 (79.44%), Query Frame = 3

Query:  105 ARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            AR+I DSRGNPTVEVD+ T+ G   RAAVPSGASTGIYEALELRDG  S YLGKGV KAV ++N  +GPAL  K     +Q  +D +M++ LDGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN +LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF++
Sbjct:    8 AREILDSRGNPTVEVDLHTAKGRF-RAAVPSGASTGIYEALELRDGDKSRYLGKGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNHDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180

HSP 2 Score: 31.9574 bits (71), Expect = 1.314e-61
Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 2

Query:  626 FQKAMKMGVEVYHHLKAV 679
            F++AM++G EVYHHLK V
Sbjct:  178 FREAMRIGAEVYHHLKGV 195

[Close]

BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENOB_PIG (Beta-enolase OS=Sus scrofa GN=ENO3 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.314e-61
Identity = 125/180 (69.44%), Postives = 143/180 (79.44%), Query Frame = 3

Query:  105 ARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            AR+I DSRGNPTVEVD+ T+ G   RAAVPSGASTGIYEALELRDG  S YLGKGV KAV ++N  +GPAL  K     +Q  +D +M++ LDGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN +LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF++
Sbjct:    8 AREILDSRGNPTVEVDLHTAKGRF-RAAVPSGASTGIYEALELRDGDKSRYLGKGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180

HSP 2 Score: 31.9574 bits (71), Expect = 1.314e-61
Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 2

Query:  626 FQKAMKMGVEVYHHLKAV 679
            F++AM++G EVYHHLK V
Sbjct:  178 FREAMRIGAEVYHHLKGV 195

[Close]

BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENOB_MOUSE (Beta-enolase OS=Mus musculus GN=Eno3 PE=1 SV=3)

HSP 1 Score: 226.098 bits (575), Expect = 1.314e-61
Identity = 125/180 (69.44%), Postives = 143/180 (79.44%), Query Frame = 3

Query:  105 ARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            AR+I DSRGNPTVEVD+ T+ G   RAAVPSGASTGIYEALELRDG  + YLGKGV KAV ++N  +GPAL  K     +Q  +D +M++ LDGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN +LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFK+
Sbjct:    8 AREILDSRGNPTVEVDLHTAKGRF-RAAVPSGASTGIYEALELRDGDKARYLGKGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 180

HSP 2 Score: 31.9574 bits (71), Expect = 1.314e-61
Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 2

Query:  626 FQKAMKMGVEVYHHLKAV 679
            F++AM++G EVYHHLK V
Sbjct:  178 FKEAMRIGAEVYHHLKGV 195

[Close]

BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENOB_BOVIN (Beta-enolase OS=Bos taurus GN=ENO3 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.233e-61
Identity = 124/180 (68.89%), Postives = 142/180 (78.89%), Query Frame = 3

Query:  105 ARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            AR+I DSRGNPTVEVD+ T+ G   RAAVPSGASTGIYEALELRDG  S YLGKGV KAV ++N  +GPAL  K     +Q  +D +M++ LDGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  L+LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF++
Sbjct:    8 AREILDSRGNPTVEVDLHTAKGRF-RAAVPSGASTGIYEALELRDGDKSRYLGKGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPELILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180

HSP 2 Score: 31.9574 bits (71), Expect = 2.233e-61
Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 2

Query:  626 FQKAMKMGVEVYHHLKAV 679
            F++AM++G EVYHHLK V
Sbjct:  178 FREAMRIGAEVYHHLKGV 195

[Close]

BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENOA_MACFA (Alpha-enolase OS=Macaca fascicularis GN=ENO1 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.455e-61
Identity = 125/187 (66.84%), Postives = 147/187 (78.61%), Query Frame = 3

Query:   84 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            ++I  V AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K  + TEQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA++F++
Sbjct:    1 MSILKVHAREIFDSRGNPTVEVDLFTSKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFRE 180

HSP 2 Score: 28.4906 bits (62), Expect = 6.455e-61
Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 2

Query:  626 FQKAMKMGVEVYHHLKAV 679
            F++AM++G EVYH+LK V
Sbjct:  178 FREAMRIGAEVYHNLKNV 195

[Close]

BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENOA_PONAB (Alpha-enolase OS=Pongo abelii GN=ENO1 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.417e-61
Identity = 124/187 (66.31%), Postives = 147/187 (78.61%), Query Frame = 3

Query:   84 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            ++I  + AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K  + TEQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA++F++
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLFTSKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFRE 180

HSP 2 Score: 28.4906 bits (62), Expect = 8.417e-61
Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 2

Query:  626 FQKAMKMGVEVYHHLKAV 679
            F++AM++G EVYH+LK V
Sbjct:  178 FREAMRIGAEVYHNLKNV 195

[Close]

BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENOA_HUMAN (Alpha-enolase OS=Homo sapiens GN=ENO1 PE=1 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 8.417e-61
Identity = 124/187 (66.31%), Postives = 147/187 (78.61%), Query Frame = 3

Query:   84 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            ++I  + AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K  + TEQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA++F++
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLFTSKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFRE 180

HSP 2 Score: 28.4906 bits (62), Expect = 8.417e-61
Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 2

Query:  626 FQKAMKMGVEVYHHLKAV 679
            F++AM++G EVYH+LK V
Sbjct:  178 FREAMRIGAEVYHNLKNV 195

[Close]

BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENOA_PYTRG (Alpha-enolase OS=Python regius PE=2 SV=3)

HSP 1 Score: 224.942 bits (572), Expect = 3.171e-60
Identity = 123/187 (65.78%), Postives = 146/187 (78.07%), Query Frame = 3

Query:   84 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            ++I  ++AR+IFDSRGNPT+EVD+ T  G + RAAVPSGASTGIYEALELRD     +LGKGVSKAV +VN  I PAL  K+ +  EQ  ID  M++ +DG+ N     K K GANAIL VSLAVCKAGA  K IPLY+HIA+L+GNK ++LPVPAFNVINGGSHAGNKLAMQEFMILP+GA  FK+
Sbjct:    1 MSILKIQAREIFDSRGNPTIEVDLYTKKG-LFRAAVPSGASTGIYEALELRDNDKTRFLGKGVSKAVEHVNKTIAPALVNKNVSVVEQEKIDKLMIE-MDGSEN-----KSKFGANAILGVSLAVCKAGAAEKDIPLYRHIADLAGNKEVILPVPAFNVINGGSHAGNKLAMQEFMILPIGAECFKE 180

HSP 2 Score: 28.4906 bits (62), Expect = 3.171e-60
Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 2

Query:  626 FQKAMKMGVEVYHHLKAV 679
            F++AM++G EVYH+LK V
Sbjct:  178 FKEAMRIGAEVYHNLKNV 195

[Close]

BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENOA_CHICK (Alpha-enolase OS=Gallus gallus GN=ENO1 PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 4.135e-60
Identity = 125/187 (66.84%), Postives = 145/187 (77.54%), Query Frame = 3

Query:   84 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            ++I  + AR+IFDSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD     YLGKGVSKAV +VN  I PAL  K+    EQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA +FK+
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLYTNKG-LFRAAVPSGASTGIYEALELRDNDKTRYLGKGVSKAVEHVNKTIAPALISKNVNVVEQEKIDKLMLE-MDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGADTFKE 180

HSP 2 Score: 28.4906 bits (62), Expect = 4.135e-60
Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 2

Query:  626 FQKAMKMGVEVYHHLKAV 679
            F++AM++G EVYH+LK V
Sbjct:  178 FKEAMRIGAEVYHNLKNV 195

[Close]

BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENO_SCHMA (Enolase OS=Schistosoma mansoni GN=ENO PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 4.135e-60
Identity = 125/185 (67.57%), Postives = 146/185 (78.92%), Query Frame = 3

Query:   84 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKD--PTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF 629
            ++I  + ARQIFDSRGNPTVEVD+ TS G + RAAVPSGASTG++EALELRD  S  Y+ KGV  AVSNVN II PAL  K+   T Q AID YM+  LDGT N     K+KLGANAIL VSLAVCKAGA    +PLY++IA L+G++++++PVPAFNVINGGSHAGNKLAMQEFMILP GASSF
Sbjct:    1 MSILTIHARQIFDSRGNPTVEVDLKTSKG-LFRAAVPSGASTGVHEALELRDTNSKAYMKKGVLTAVSNVNKIIAPALINKNIPVTNQAAIDKYMID-LDGTEN-----KEKLGANAILGVSLAVCKAGAAEAGLPLYRYIARLAGHEDVIMPVPAFNVINGGSHAGNKLAMQEFMILPTGASSF 178

HSP 2 Score: 29.6462 bits (65), Expect = 4.135e-60
Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 2

Query:  626 FQKAMKMGVEVYHHLKAV 679
            F +AM++G EVYH+LKAV
Sbjct:  178 FTEAMQIGTEVYHNLKAV 195

The following BLAST results are available for this feature:

BLAST of FC930259 vs. ExPASy Swiss-Prot

BLAST of FC930259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENOB_RABIT	1.314e-61	69.44	Beta-enolase OS=Oryctolagus cuniculus GN=ENO3 PE=1...	[more]
ENOB_PIG	1.314e-61	69.44	Beta-enolase OS=Sus scrofa GN=ENO3 PE=2 SV=1	[more]
ENOB_MOUSE	1.314e-61	69.44	Beta-enolase OS=Mus musculus GN=Eno3 PE=1 SV=3	[more]
ENOB_BOVIN	2.233e-61	68.89	Beta-enolase OS=Bos taurus GN=ENO3 PE=2 SV=1	[more]
ENOA_MACFA	6.455e-61	66.84	Alpha-enolase OS=Macaca fascicularis GN=ENO1 PE=2 ...	[more]
ENOA_PONAB	8.417e-61	66.31	Alpha-enolase OS=Pongo abelii GN=ENO1 PE=2 SV=1	[more]
ENOA_HUMAN	8.417e-61	66.31	Alpha-enolase OS=Homo sapiens GN=ENO1 PE=1 SV=2	[more]
ENOA_PYTRG	3.171e-60	65.78	Alpha-enolase OS=Python regius PE=2 SV=3	[more]
ENOA_CHICK	4.135e-60	66.84	Alpha-enolase OS=Gallus gallus GN=ENO1 PE=2 SV=2	[more]
ENO_SCHMA	4.135e-60	67.57	Enolase OS=Schistosoma mansoni GN=ENO PE=2 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	C34005E03EF PostHarvC1 Citrus clementina cDNA clone C34005E03, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC930259 ID=FC930259; Name=FC930259; organism=Citrus clementina; type=EST; length=679bp
AATCACAAGGCTCTTGTCGCACTCACAGACTCTCTCTCTCGTTCTAGATC
TTTCTTCGCTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACTGCCGT
CAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCG
ACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGT
GCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGA
TTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATCA
TTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGAC
AACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTG
CAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCT
GCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCC
GAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGT
CATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTA
TGATTCTTCCTGTAGGAGCTTCCTCTTTCAAAAAGCCATGAAGATGGGTG
TAGAAGTATATCACCATCTGAAGGCTGTG