FC930259

Overview
NameFC930259
Unique NameFC930259
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930259_ssr30 microsatellite FC930259_ssr30:30..39. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:6..685. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENOA_RAT (Alpha-enolase OS=Rattus norvegicus GN=Eno1 PE=1 SV=4)

HSP 1 Score: 224.172 bits (570), Expect = 5.391e-60
Identity = 123/187 (65.78%), Postives = 146/187 (78.07%), Query Frame = 3
Query:   84 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            ++I  + AR+IFDSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD     ++GKGVSKAV ++N  I PAL  K  +  EQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF++
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLYTAKG-LFRAAVPSGASTGIYEALELRDNDKTRFMGKGVSKAVEHINKTIAPALVSKKLNVVEQEKIDQLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180          

HSP 2 Score: 28.4906 bits (62), Expect = 5.391e-60
Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  626 FQKAMKMGVEVYHHLKAV 679
            F++AM++G EVYH+LK V
Sbjct:  178 FREAMRIGAEVYHNLKNV 195          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENOA_BOVIN (Alpha-enolase OS=Bos taurus GN=ENO1 PE=1 SV=4)

HSP 1 Score: 223.402 bits (568), Expect = 9.165e-60
Identity = 123/187 (65.78%), Postives = 145/187 (77.54%), Query Frame = 3
Query:   84 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            ++I  V AR+IFDSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K  +  EQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA +F++
Sbjct:    1 MSILKVHAREIFDSRGNPTVEVDLFTAKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVVEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNAEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAENFRE 180          

HSP 2 Score: 28.4906 bits (62), Expect = 9.165e-60
Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  626 FQKAMKMGVEVYHHLKAV 679
            F++AM++G EVYH+LK V
Sbjct:  178 FREAMRIGAEVYHNLKNV 195          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENOA_ALLMI (Alpha-enolase OS=Alligator mississippiensis PE=2 SV=3)

HSP 1 Score: 223.402 bits (568), Expect = 9.165e-60
Identity = 124/187 (66.31%), Postives = 147/187 (78.61%), Query Frame = 3
Query:   84 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            ++I  + AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     ++GKGVSKAV++VN  I PAL  K+ +  EQ  ID  M++ +DG+ N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA SFK+
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLYTSKG-LFRAAVPSGASTGIYEALELRDNDKTRFMGKGVSKAVAHVNKTIAPALISKNISVVEQEKIDRLMLE-MDGSEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFKE 180          

HSP 2 Score: 28.4906 bits (62), Expect = 9.165e-60
Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  626 FQKAMKMGVEVYHHLKAV 679
            F++AM++G EVYH+LK V
Sbjct:  178 FKEAMRIGAEVYHNLKNV 195          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENOA_TRASC (Alpha-enolase OS=Trachemys scripta PE=2 SV=3)

HSP 1 Score: 223.016 bits (567), Expect = 1.195e-59
Identity = 125/187 (66.84%), Postives = 145/187 (77.54%), Query Frame = 3
Query:   84 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKD--PTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            ++I  + AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     +LGKGVSKAV +VN  I PAL  K+    EQ  ID  M++ +DG+ N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA SFK+
Sbjct:    1 MSILKIFAREIFDSRGNPTVEVDLYTSKG-LFRAAVPSGASTGIYEALELRDNDKTRFLGKGVSKAVGHVNKTIAPALISKNINVVEQEKIDKLMLE-MDGSEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFKE 180          

HSP 2 Score: 28.4906 bits (62), Expect = 1.195e-59
Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  626 FQKAMKMGVEVYHHLKAV 679
            F++AM++G EVYH+LK V
Sbjct:  178 FKEAMRIGAEVYHNLKNV 195          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENO_CUNEL (Enolase (Fragment) OS=Cunninghamella elegans PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.558e-59
Identity = 128/187 (68.45%), Postives = 144/187 (77.01%), Query Frame = 3
Query:   87 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDG-GSDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            TIT V ARQIFDSRGNPTVEV+VTT  G V RA VPSGASTG++EALELRDG  SDYLGKGV KAV NVN II   L  A     +Q A+D++++Q LDGT N     K+KLGANAIL VSLAV KAGA  K +P Y HIA+L+G+K   VLPVPAFNVINGGSHAGNKLAMQEFMI+P GA SF +
Sbjct:    2 TITKVHARQIFDSRGNPTVEVEVTTDKG-VFRAGVPSGASTGVHEALELRDGVKSDYLGKGVLKAVGNVNTIINEELVKANLSVVDQKAVDDFLIQ-LDGTEN-----KEKLGANAILGVSLAVAKAGAAEKGVPFYVHIADLAGSKKPFVLPVPAFNVINGGSHAGNKLAMQEFMIMPTGAKSFSE 181          

HSP 2 Score: 28.1054 bits (61), Expect = 1.558e-59
Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  626 FQKAMKMGVEVYHHLKAV 679
            F +AMK+G EVYH LK V
Sbjct:  179 FSEAMKLGSEVYHTLKKV 196          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENOA_MOUSE (Alpha-enolase OS=Mus musculus GN=Eno1 PE=1 SV=3)

HSP 1 Score: 222.631 bits (566), Expect = 1.558e-59
Identity = 122/187 (65.24%), Postives = 146/187 (78.07%), Query Frame = 3
Query:   84 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            ++I  + AR+IFDSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD     ++GKGVS+AV ++N  I PAL  K  +  EQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF++
Sbjct:    1 MSILRIHAREIFDSRGNPTVEVDLYTAKG-LFRAAVPSGASTGIYEALELRDNDKTRFMGKGVSQAVEHINKTIAPALVSKKVNVVEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180          

HSP 2 Score: 28.4906 bits (62), Expect = 1.558e-59
Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  626 FQKAMKMGVEVYHHLKAV 679
            F++AM++G EVYH+LK V
Sbjct:  178 FREAMRIGAEVYHNLKNV 195          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENOA_XENLA (Alpha-enolase OS=Xenopus laevis GN=eno1 PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 2.648e-59
Identity = 122/187 (65.24%), Postives = 144/187 (77.01%), Query Frame = 3
Query:   84 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKD--PTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            ++I  ++AR+IFDSRGNPTVEVD+ T  G + RAAVPSGASTGIYEALELRD     YLGKGV +AV  VN  +GPAL  ++    EQ  ID  M++ +DGT N     K K GANA+L VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA SFK+
Sbjct:    1 MSIKNIRAREIFDSRGNPTVEVDLYTCKG-LFRAAVPSGASTGIYEALELRDNDKTRYLGKGVGRAVKYVNEFLGPALCTQNLNVVEQEKIDKLMIE-MDGTEN-----KSKFGANALLGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGADSFKE 180          

HSP 2 Score: 28.4906 bits (62), Expect = 2.648e-59
Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  626 FQKAMKMGVEVYHHLKAV 679
            F++AM++G EVYH+LK V
Sbjct:  178 FKEAMRIGAEVYHNLKNV 195          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENO_CAEEL (Enolase OS=Caenorhabditis elegans GN=enol-1 PE=1 SV=3)

HSP 1 Score: 218.009 bits (554), Expect = 3.453e-59
Identity = 127/183 (69.40%), Postives = 142/183 (77.60%), Query Frame = 3
Query:   90 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF 629
            IT + ARQI+DSRGNPTVEVD+ T  G V RAAVPSGASTG++EALELRDG    +LGKGV KAVSN+N  I PAL  K  D T Q  ID++M+  LDG+ N     K  LGANAIL VSLAV KAGA  K +PLYK+IAEL+G   +VLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF
Sbjct:    3 ITKIHARQIYDSRGNPTVEVDLFTEKG-VFRAAVPSGASTGVHEALELRDGDKAVHLGKGVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMA-LDGSEN-----KGNLGANAILGVSLAVAKAGAVHKGLPLYKYIAELAGTGKVVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF 178          

HSP 2 Score: 31.9574 bits (71), Expect = 3.453e-59
Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = 2
Query:  626 FQKAMKMGVEVYHHLKA 676
            F +AM+MG EVYHHLKA
Sbjct:  178 FAEAMRMGSEVYHHLKA 194          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENO_PLAYO (Enolase OS=Plasmodium yoelii yoelii GN=ENO PE=3 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 3.490e-59
Identity = 118/181 (65.19%), Postives = 141/181 (77.90%), Query Frame = 3
Query:  114 IFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSG--NKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RW 647
            IF SRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD   S YLGKGV +A+ N+N II P L G D  EQ  IDN MVQ+LDG+  EWGW K KLGANAILA+S+A+C+AGA   K  LYK++A+L+G   + ++LPVP  NVINGGSHAGNKL+ QEFMI+PVGA SFK+  R+
Sbjct:   11 IFYSRGNPTVEVDLETTLG-IFRAAVPSGASTGIYEALELRDNDKSRYLGKGVQQAIKNINEIIAPKLIGLDCREQKKIDNMMVQELDGSKTEWGWSKSKLGANAILAISMAICRAGAAANKTSLYKYVAQLAGKNTEKMILPVPCLNVINGGSHAGNKLSFQEFMIVPVGAPSFKEAMRY 190          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENOG_CHICK (Gamma-enolase OS=Gallus gallus GN=ENO2 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.301e-58
Identity = 119/186 (63.98%), Postives = 143/186 (76.88%), Query Frame = 3
Query:   84 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFK 632
            + +  + AR+I DSRGNPTVEVD+ T  G + RAAVPSGASTGIYEALELRD   S +LGKGV +AV ++N+ + PA+ G      +Q  IDN M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN +L+LPVPAFNVINGGSHAGNKLAMQEFMILPVGA SF+
Sbjct:    1 MAVERIHAREILDSRGNPTVEVDLYTHKG-MFRAAVPSGASTGIYEALELRDNDKSRFLGKGVLQAVDHINSTVAPAIVGSGLSVVDQEKIDNLMLE-MDGTEN-----KSKFGANAILGVSLAVCKAGAAEKDVPLYRHIADLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFR 179          

HSP 2 Score: 28.8758 bits (63), Expect = 1.301e-58
Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  626 FQKAMKMGVEVYHHLKAV 679
            F+ AM++G EVYH+LK+V
Sbjct:  178 FRDAMRIGAEVYHNLKSV 195          
The following BLAST results are available for this feature:
BLAST of FC930259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENOA_RAT5.391e-6065.78Alpha-enolase OS=Rattus norvegicus GN=Eno1 PE=1 SV... [more]
ENOA_BOVIN9.165e-6065.78Alpha-enolase OS=Bos taurus GN=ENO1 PE=1 SV=4[more]
ENOA_ALLMI9.165e-6066.31Alpha-enolase OS=Alligator mississippiensis PE=2 S... [more]
ENOA_TRASC1.195e-5966.84Alpha-enolase OS=Trachemys scripta PE=2 SV=3[more]
ENO_CUNEL1.558e-5968.45Enolase (Fragment) OS=Cunninghamella elegans PE=2 ... [more]
ENOA_MOUSE1.558e-5965.24Alpha-enolase OS=Mus musculus GN=Eno1 PE=1 SV=3[more]
ENOA_XENLA2.648e-5965.24Alpha-enolase OS=Xenopus laevis GN=eno1 PE=2 SV=2[more]
ENO_CAEEL3.453e-5969.40Enolase OS=Caenorhabditis elegans GN=enol-1 PE=1 S... [more]
ENO_PLAYO3.490e-5965.19Enolase OS=Plasmodium yoelii yoelii GN=ENO PE=3 SV... [more]
ENOG_CHICK1.301e-5863.98Gamma-enolase OS=Gallus gallus GN=ENO2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34005E03EF PostHarvC1 Citrus clementina cDNA clone C34005E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930259 ID=FC930259; Name=FC930259; organism=Citrus clementina; type=EST; length=679bp
AATCACAAGGCTCTTGTCGCACTCACAGACTCTCTCTCTCGTTCTAGATC
TTTCTTCGCTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACTGCCGT
CAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCG
ACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGT
GCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGA
TTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATCA
TTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGAC
AACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTG
CAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCT
GCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCC
GAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGT
CATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTA
TGATTCTTCCTGTAGGAGCTTCCTCTTTCAAAAAGCCATGAAGATGGGTG
TAGAAGTATATCACCATCTGAAGGCTGTG
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