FC930259

Overview
NameFC930259
Unique NameFC930259
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930259_ssr30 microsatellite FC930259_ssr30:30..39. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:6..685. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENO_THEGJ (Enolase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=eno PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.919e-49
Identity = 113/187 (60.43%), Postives = 131/187 (70.05%), Query Frame = 3
Query:   90 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RWV 650
            ITAV AR+I DSRGNPTVEV+V T    + RAAVPSGASTG +EALELRDGG  + GKGV +AV NVN II P + G D T Q  ID  M+ +LDGT N     K  LGANAIL VSLAV KA A+   +PLY++I    G    V+PVP  NVINGG HAGN+L  QEFMI+PVGA SF++  RWV
Sbjct:    7 ITAVVAREILDSRGNPTVEVEVYTPVS-MGRAAVPSGASTGTHEALELRDGGKRFHGKGVRRAVENVNKIIAPEIIGMDVTWQRDIDMLMI-ELDGTEN-----KSNLGANAILGVSLAVAKAAANALGLPLYQYI---GGTNAYVMPVPMSNVINGGVHAGNELDFQEFMIMPVGAKSFREGIRWV 183          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENO_RHORB (Enolase OS=Rhodotorula rubra GN=ENO PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 2.118e-49
Identity = 111/189 (58.73%), Postives = 135/189 (71.43%), Query Frame = 3
Query:   84 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            + I+ + +R ++DSRGNPTVEV++TT  G   R+ VPSGASTG++EALELRDG  S +LGKGV KAV+NVN  I PAL  A  D  +Q  ID ++++ LDGT N     K KLGANAIL VSLA  KAGA  K +PLYKHIA++S  K    VLPVP  NV+NGGSHAG  LA QEFMI+P GA SF +
Sbjct:    1 MAISKIHSRYVYDSRGNPTVEVELTTEKG-TFRSIVPSGASTGVHEALELRDGDKSKWLGKGVLKAVANVNDTIAPALIEANIDVADQAKIDEFLLK-LDGTPN-----KAKLGANAILGVSLAAAKAGAAQKDVPLYKHIADISKAKEGKFVLPVPFQNVLNGGSHAGGDLAFQEFMIVPSGAPSFSE 182          

HSP 2 Score: 27.335 bits (59), Expect = 2.118e-49
Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 2
Query:  626 FQKAMKMGVEVYHHLKAV 679
            F + +++G EVYHHLK++
Sbjct:  180 FSEGLRIGSEVYHHLKSL 197          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENO_CARHZ (Enolase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=eno PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 2.118e-49
Identity = 105/183 (57.38%), Postives = 128/183 (69.95%), Query Frame = 3
Query:   90 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            I  V AR+I DSRGNPTVEVDV   DG   RAAVPSGASTG +EA+ELRD     YLGKGV++AV NVN+IIGP + G D  +Q  ID Y++ +LDGT N     K KLGANAIL VS+AV KA A+   +PLY++   L G    VLP P  N++NGG HA N + +QEFMI+P+GASSF +
Sbjct:    4 IREVIAREILDSRGNPTVEVDVILEDGTWGRAAVPSGASTGAFEAVELRDNDPQRYLGKGVTQAVENVNSIIGPEILGFDALDQVGIDEYLI-ELDGTPN-----KGKLGANAILGVSMAVAKAAANYLGLPLYRY---LGGTNARVLPAPMMNILNGGKHADNNVDIQEFMIMPLGASSFSE 177          

HSP 2 Score: 27.335 bits (59), Expect = 2.118e-49
Identity = 10/18 (55.56%), Postives = 15/18 (83.33%), Query Frame = 2
Query:  626 FQKAMKMGVEVYHHLKAV 679
            F +A++MG EV+H+LK V
Sbjct:  175 FSEALRMGAEVFHNLKKV 192          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENO_PSE14 (Enolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=eno PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.761e-49
Identity = 105/188 (55.85%), Postives = 127/188 (67.55%), Query Frame = 3
Query:   90 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RW 647
            I  +K R++ DSRGNPTVE DV   +G V  A  PSGASTG  EALELRDG  S Y+GKGV KAV+N+N  I   L GKDP +Q A+D+ M+ +LDGT N     K  LGANAILAVSLA  KA A  + +PLY HIA L+G   +  +PVP  N+INGG HA N + +QEFMI PVGA +F +  RW
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVVLDNGIVGSACAPSGASTGSREALELRDGDKSRYMGKGVLKAVANINGPIRDLLLGKDPVDQKALDHAMI-KLDGTEN-----KASLGANAILAVSLAAAKAAAQDQDLPLYAHIANLNGTPGVYSMPVPMMNIINGGEHADNNIDIQEFMIQPVGAKTFAEGLRW 185          

HSP 2 Score: 27.335 bits (59), Expect = 2.761e-49
Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  626 FQKAMKMGVEVYHHLKAV 679
            F + ++ G E++HHLKAV
Sbjct:  179 FAEGLRWGTEIFHHLKAV 196          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENO_CALS8 (Enolase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=eno PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.274e-49
Identity = 106/188 (56.38%), Postives = 133/188 (70.74%), Query Frame = 3
Query:   75 KMAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            K+ ++ITAVKAR+I DSRGNPTVEV+V  +D  V RAAVPSGASTG++EA+ELRDG    Y+GKGV KAV NVN +I P + G +   Q  ID  M+ +LDGT N     K KLGANAIL VSLAV KA A+   +PLY++I  ++      LPVP  N++NGG HA N + +QEFMI+PVGA SF +
Sbjct:    2 KVDLSITAVKAREILDSRGNPTVEVEVVVNDEFVGRAAVPSGASTGMFEAVELRDGDKKRYMGKGVLKAVENVNEVIAPEIIGMNALNQVEIDRLMI-ELDGTEN-----KSKLGANAILGVSLAVAKAAANALGLPLYQYIGGVNAK---YLPVPMMNILNGGKHADNSVDLQEFMIMPVGAKSFSE 180          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENO_GEOSW (Enolase OS=Geobacillus sp. (strain WCH70) GN=eno PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.599e-49
Identity = 106/183 (57.92%), Postives = 128/183 (69.95%), Query Frame = 3
Query:   90 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            I  V AR++ DSRGNPTVEV+V T DG   RA VPSGASTG YEA+ELRDG  S YLGKGV KAV NVN II PA+ G + T+Q  ID  ++ +LDGT N     K KLGANAIL VSLAV +A A    +PLY++   L G     LPVP  N++NGG+HA N + +QEFMI+PVGA SF++
Sbjct:    4 IVDVYAREVLDSRGNPTVEVEVYTEDGGFGRALVPSGASTGEYEAVELRDGDKSRYLGKGVLKAVENVNEIIAPAIIGFEVTDQVGIDKTLI-ELDGTEN-----KSKLGANAILGVSLAVARAAADELDMPLYQY---LGGFNAKTLPVPMMNILNGGAHADNNVDIQEFMIMPVGAKSFRE 177          

HSP 2 Score: 28.4906 bits (62), Expect = 3.599e-49
Identity = 10/18 (55.56%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  626 FQKAMKMGVEVYHHLKAV 679
            F++A++MG E++H LKAV
Sbjct:  175 FREALRMGAEIFHSLKAV 192          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENO1_PSESM (Enolase 1 OS=Pseudomonas syringae pv. tomato GN=eno1 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 4.690e-49
Identity = 104/188 (55.32%), Postives = 125/188 (66.49%), Query Frame = 3
Query:   90 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RW 647
            I  +K R++ DSRGNPTVE DV   +G +  A  PSGASTG  EALELRDG  S Y+GKGV KAV+N+N  I   L GKDP +Q A+D+ M+  LD T N     K  LGANAILAVSLA  KA A  + +PLY HIA L+G   +  +PVP  N+INGG HA N + +QEFMI PVGA SF +  RW
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVLLDNGIIGSACAPSGASTGSREALELRDGDKSRYMGKGVLKAVANINGPIRDLLLGKDPVDQKALDHAMI-ALDATEN-----KASLGANAILAVSLAAAKAAAQDQDLPLYAHIANLNGTPGVYSMPVPMMNIINGGEHADNNIDIQEFMIQPVGAKSFAEALRW 185          

HSP 2 Score: 28.8758 bits (63), Expect = 4.690e-49
Identity = 10/18 (55.56%), Postives = 15/18 (83.33%), Query Frame = 2
Query:  626 FQKAMKMGVEVYHHLKAV 679
            F +A++ G E++HHLKAV
Sbjct:  179 FAEALRWGTEIFHHLKAV 196          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENO_PYRFU (Enolase OS=Pyrococcus furiosus GN=eno PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.584e-49
Identity = 113/187 (60.43%), Postives = 130/187 (69.52%), Query Frame = 3
Query:   90 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RWV 650
            I  V AR+I DSRGNPTVEVDV T  G + RAAVPSGASTG +EALELRDGG  Y GKGV +AV NVN II P L G D   Q  ID  ++ +LDGT N     K  +GANAILAVSLAV KA A+  ++PLY++   L G    VLPVP  NVINGG HAGN L  QEFMI+P+GA SF++  RWV
Sbjct:    7 IVGVVAREILDSRGNPTVEVDVYTHVG-MGRAAVPSGASTGTHEALELRDGGKRYHGKGVRRAVENVNKIIAPELIGMDVRWQREIDALLL-ELDGTEN-----KSNVGANAILAVSLAVAKAAANSLELPLYQY---LGGVNAYVLPVPLSNVINGGVHAGNDLDFQEFMIMPIGADSFREAIRWV 183          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENO_ACIAD (Enolase OS=Acinetobacter sp. (strain ADP1) GN=eno PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.293e-49
Identity = 108/183 (59.02%), Postives = 129/183 (70.49%), Query Frame = 3
Query:   90 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            I  ++AR+I DSRGNPT+E DV  + G V RA  PSGASTG  EALELRDG  + YLGKGV  AV+NVN II  AL GK   EQ  IDN M++ LDGT N     K+KLGANA LAVSLA  +A A  KKIPL+++IA+L G   L +PVP  N+INGGSHA N + +QEFMI PVG +SF +
Sbjct:    6 IVDIRAREILDSRGNPTIEADVILASGVVGRACAPSGASTGSREALELRDGDKARYLGKGVKTAVNNVNTIIRDALVGKSVFEQKDIDNTMIE-LDGTEN-----KEKLGANATLAVSLAAARAAADEKKIPLFQYIADLRGQTILTMPVPMMNIINGGSHADNNVDIQEFMIEPVGFTSFSE 182          
BLAST of FC930259 vs. ExPASy Swiss-Prot
Match: ENO_BACP2 (Enolase OS=Bacillus pumilus (strain SAFR-032) GN=eno PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 7.968e-49
Identity = 106/183 (57.92%), Postives = 128/183 (69.95%), Query Frame = 3
Query:   90 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 635
            I  V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG YEA+ELRDG  D YLGKGV  AV+NVN II P L G D TEQ AID  ++ +LDGT N     K KLGANAIL VS+AV +A A   +IPLY++   L G  +  LPVP  N++NGG HA N + +QEFMI+PVGA +F++
Sbjct:    4 IVDVYAREVLDSRGNPTVEVEVYTESGGFGRALVPSGASTGEYEAVELRDGDKDRYLGKGVLTAVNNVNEIIAPELLGFDVTEQVAIDKMLI-ELDGTEN-----KGKLGANAILGVSIAVARAAADFLQIPLYQY---LGGFNSKTLPVPMMNIVNGGEHADNNVDIQEFMIMPVGAPNFRE 177          

HSP 2 Score: 26.1794 bits (56), Expect = 7.968e-49
Identity = 8/18 (44.44%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  626 FQKAMKMGVEVYHHLKAV 679
            F++A++MG +++H LK+V
Sbjct:  175 FREALRMGAQIFHSLKSV 192          
The following BLAST results are available for this feature:
BLAST of FC930259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_THEGJ1.919e-4960.43Enolase OS=Thermococcus gammatolerans (strain DSM ... [more]
ENO_RHORB2.118e-4958.73Enolase OS=Rhodotorula rubra GN=ENO PE=1 SV=1[more]
ENO_CARHZ2.118e-4957.38Enolase OS=Carboxydothermus hydrogenoformans (stra... [more]
ENO_PSE142.761e-4955.85Enolase OS=Pseudomonas syringae pv. phaseolicola (... [more]
ENO_CALS83.274e-4956.38Enolase OS=Caldicellulosiruptor saccharolyticus (s... [more]
ENO_GEOSW3.599e-4957.92Enolase OS=Geobacillus sp. (strain WCH70) GN=eno P... [more]
ENO1_PSESM4.690e-4955.32Enolase 1 OS=Pseudomonas syringae pv. tomato GN=en... [more]
ENO_PYRFU5.584e-4960.43Enolase OS=Pyrococcus furiosus GN=eno PE=3 SV=1[more]
ENO_ACIAD7.293e-4959.02Enolase OS=Acinetobacter sp. (strain ADP1) GN=eno ... [more]
ENO_BACP27.968e-4957.92Enolase OS=Bacillus pumilus (strain SAFR-032) GN=e... [more]

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Properties
Property NameValue
Genbank descriptionC34005E03EF PostHarvC1 Citrus clementina cDNA clone C34005E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930259 ID=FC930259; Name=FC930259; organism=Citrus clementina; type=EST; length=679bp
AATCACAAGGCTCTTGTCGCACTCACAGACTCTCTCTCTCGTTCTAGATC
TTTCTTCGCTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACTGCCGT
CAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCG
ACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGT
GCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGA
TTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATCA
TTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGAC
AACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTG
CAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCT
GCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCC
GAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGT
CATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTA
TGATTCTTCCTGTAGGAGCTTCCTCTTTCAAAAAGCCATGAAGATGGGTG
TAGAAGTATATCACCATCTGAAGGCTGTG
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