FC930261
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930261 vs. ExPASy Swiss-Prot
Match: ERF1_BLEAM (Eukaryotic peptide chain release factor subunit 1 OS=Blepharisma americanum GN=eRF1 PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.231e-50 Identity = 95/181 (52.49%), Postives = 130/181 (71.82%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYN-KVPPNGLVLYTGTIVTDDGK-EKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHSSVLTFPRTWKK 673 +G E +N RGNGTS+ISLI+PPR+Q+ + KM+ +E+G +SNIKSR+ RQ+V A+TS ++RLKLYN ++P NGL+LY G ++ ++G EKK TIDF+P+R IN +LY+CDNKFHT L +LL DDKFGFI++DGNGTLFGTL GNT+EVLH + P+ ++ Sbjct: 2 EGDELTQNIEQWKIKRLIDNLDKARGNGTSLISLIIPPREQLPIINKMITEEYGKSSNIKSRIVRQAVQSALTSTKERLKLYNNRLPANGLILYCGEVINEEGVCEKKYTIDFQPYRAINTTLYICDNKFHTQPLKDLLVMDDKFGFIIIDGNGTLFGTLQGNTKEVLHKFSVDLPKKHRR 182
BLAST of FC930261 vs. ExPASy Swiss-Prot
Match: ERF1_BLEMU (Eukaryotic peptide chain release factor subunit 1 OS=Blepharisma musculus GN=eRF1 PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 8.923e-50 Identity = 95/181 (52.49%), Postives = 129/181 (71.27%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYN-KVPPNGLVLYTGTIVTDDGK-EKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHSSVLTFPRTWKK 673 +G E +N RGNGTS+ISLI+PPR+Q+ + KM+ +E+G +SNIKSR+ RQ+V A+TS ++RLKLYN ++P NGL+LY G ++ ++G EKK TIDF+P+R IN +LY+CDNKFHT L +LL DDKFGFI++DGNG LFGTL GNTREVLH + P+ ++ Sbjct: 2 EGDELTQNIEQWKIKRLIDNLDKARGNGTSLISLIIPPREQLPIINKMITEEYGKSSNIKSRIVRQAVQSALTSTKERLKLYNNRLPANGLILYCGEVINEEGVCEKKYTIDFQPYRAINTTLYICDNKFHTQPLKDLLVMDDKFGFIIIDGNGALFGTLQGNTREVLHKFSVDLPKKHRR 182
BLAST of FC930261 vs. ExPASy Swiss-Prot
Match: ERF1_TETTH (Eukaryotic peptide chain release factor subunit 1 OS=Tetrahymena thermophila GN=ERF1 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.414e-47 Identity = 87/151 (57.62%), Postives = 113/151 (74.83%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHSSVLTFPR 661 RG+GTSM+SLI+PP+ Q++ TK++ DEF A+NIK RVNRQSV A+ SA QRLKLY + P NGL+LY G ++ ++GKE K+ IDFEP++PIN SLY CD+KFH D L LLE+D FGFIVMDG G L+ L GNT+ VL+ + P+ Sbjct: 27 RGSGTSMVSLIIPPKKQINDSTKLISDEFSKATNIKDRVNRQSVQDAMVSALQRLKLYQRTPNNGLILYCGKVLNEEGKEIKLLIDFEPYKPINTSLYFCDSKFHVDELGSLLETDPPFGFIVMDGQGALYANLQGNTKTVLNKFSVELPK 177
BLAST of FC930261 vs. ExPASy Swiss-Prot
Match: ERF1_TRYBB (Eukaryotic peptide chain release factor subunit 1 OS=Trypanosoma brucei brucei GN=ERF1 PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.057e-46 Identity = 85/151 (56.29%), Postives = 118/151 (78.15%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHSSVLTFPR 661 RG GTS+IS+ M P++Q+S + L +E+GTASNIKS N+ SV AIT++ RLK YN++PPNGL+LY GT++T + KEKK+T+D EPF+P++ SLYLCDNKFHT+ L+ +LESD+KFGFIV+DG+GT + TL G+ +E L S + P+ Sbjct: 29 RGMGTSVISIYMTPKEQISGMVTKLNNEYGTASNIKSHTNKLSVQSAITASLGRLKQYNRLPPNGLLLYCGTVLTAENKEKKLTLDIEPFKPVSRSLYLCDNKFHTEELHRMLESDEKFGFIVVDGSGTTYATLCGSVKEKLSSFTVELPK 179
BLAST of FC930261 vs. ExPASy Swiss-Prot
Match: ERF1_GIALA (Eukaryotic peptide chain release factor subunit 1 OS=Giardia lamblia GN=ERF1 PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 5.985e-46 Identity = 89/150 (59.33%), Postives = 115/150 (76.67%), Query Frame = 2 Query: 212 GNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHSSVLTFPR 661 G+GTS+ISL++PP +Q+S VT ML +E+GTASNIKSRVN+ +VL AITSA RLKLYN++PPNGL +Y G I +DGK KV ID+ P++PI+ +YLCD+KFHT+ L ELL +DD FGFI+MDG TL TLSG R +L S + P+ Sbjct: 35 GSGTSVISLLIPPGEQLSSVTGMLTNEYGTASNIKSRVNKNAVLSAITSAMSRLKLYNRLPPNGLAVYCGEI-EEDGKNTKVVIDYTPYKPISNFIYLCDSKFHTEHLRELLTNDDTFGFIIMDGKETLMATLSGTVRTILDRSTVDLPK 183
BLAST of FC930261 vs. ExPASy Swiss-Prot
Match: ERF1_OXYTR (Eukaryotic peptide chain release factor subunit 1 OS=Oxytricha trifallax GN=ERF1 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.618e-45 Identity = 85/156 (54.49%), Postives = 111/156 (71.15%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGK-EKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHSSVLTFPRTWKK 673 +GNGTSM+SLI+PP+D +++ K+L E A NIKSR+ +QSV+ AITS +++LKLY + P NGL LY G I +DGK EKK+ DFEPFRPIN LY C KF T+ L LL DDKFGFI++DGNG L+ TL GN+RE+L + P+ +K Sbjct: 32 KGNGTSMVSLIIPPKDDINKYGKLLTGEMSAAQNIKSRITKQSVVTAITSTKEKLKLYKQTPTNGLCLYCGVIYMEDGKTEKKINFDFEPFRPINQFLYFCGGKFQTEPLLSLLADDDKFGFIIVDGNGALYATLQGNSREILQKITVELPKKHRK 187
BLAST of FC930261 vs. ExPASy Swiss-Prot
Match: ERF1_DIDNA (Eukaryotic peptide chain release factor subunit 1 OS=Didinium nasutum GN=eRF1 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 8.643e-45 Identity = 85/151 (56.29%), Postives = 115/151 (76.16%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHSSVLTFPR 661 +G+GTSMI+LI+ +DQ++ +ML +E G ASNIKSRV RQ+V A+TS ++LKLYNK PPNGLV++ G + +DG EK + ID EPF+PIN +LY CD+ FHT+ + +LLE +DKFGFI+MDGNG+LFGTL G+TR VL + P+ Sbjct: 30 KGSGTSMITLIINFKDQINIHARMLAEEVGKASNIKSRVTRQNVTDALTSTLEKLKLYNKTPPNGLVIFCGLVQQEDGGEKMIKIDLEPFKPINTTLYKCDSVFHTEEVRKLLEDNDKFGFIIMDGNGSLFGTLQGSTRTVLLKFNVDLPK 180
BLAST of FC930261 vs. ExPASy Swiss-Prot
Match: ERF1_STYMT (Eukaryotic peptide chain release factor subunit 1 OS=Stylonychia mytilus GN=ERF1 PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.129e-44 Identity = 83/156 (53.21%), Postives = 112/156 (71.79%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGK-EKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHSSVLTFPRTWKK 673 +GNGTSM+SLI+PP++ +++ K+L E A NIKSR+ RQSV+ AITS +++LKLY + P NGL +Y G I+ +DGK EKK+ DFEPFRPIN +Y C KF T+ L LL DDKFGFI++DGNG L+ TL GN+RE+L + P+ +K Sbjct: 32 KGNGTSMVSLIIPPKEDINKSGKLLVGELSAAQNIKSRITRQSVITAITSTKEKLKLYRQTPTNGLCIYCGVILMEDGKTEKKINFDFEPFRPINQFMYFCGGKFQTEPLTTLLADDDKFGFIIVDGNGALYATLQGNSREILQKITVELPKKHRK 187
BLAST of FC930261 vs. ExPASy Swiss-Prot
Match: ERF1_STYLE (Eukaryotic peptide chain release factor subunit 1 OS=Stylonychia lemnae GN=ERF1 PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.129e-44 Identity = 83/156 (53.21%), Postives = 112/156 (71.79%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGK-EKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHSSVLTFPRTWKK 673 +GNGTSM+SLI+PP++ +++ K+L E A NIKSR+ RQSV+ AITS +++LKLY + P NGL +Y G I+ +DGK EKK+ DFEPFRPIN +Y C KF T+ L LL DDKFGFI++DGNG L+ TL GN+RE+L + P+ +K Sbjct: 32 KGNGTSMVSLIIPPKEDINKSGKLLVGELSAAQNIKSRITRQSVITAITSTKEKLKLYRQTPTNGLCIYCGVILMEDGKTEKKINFDFEPFRPINQFMYFCGGKFQTEPLTTLLADDDKFGFIIVDGNGALYATLQGNSREILQKITVELPKKHRK 187
BLAST of FC930261 vs. ExPASy Swiss-Prot
Match: ERF1_DILMA (Eukaryotic peptide chain release factor subunit 1 OS=Dileptus margaritifer GN=eRF1 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.057e-42 Identity = 82/151 (54.30%), Postives = 110/151 (72.85%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHSSVLTFPR 661 +G+GTSMISLI+ +DQ++ KML DE G ASNIKSRV RQ+V A+TS ++LKLYNK P NGL++Y G D EK ID EPF+PIN SLY CD+ FHT+ + +LLE +D+FGF++MDGNG+LFG++ G TR V+ ++ P+ Sbjct: 30 KGSGTSMISLIINYKDQINPFMKMLVDEVGKASNIKSRVTRQNVTDALTSTMEKLKLYNKTPNNGLIIYCGLASEGDSGEKMFKIDMEPFKPINTSLYRCDSVFHTEEVKKLLEDNDRFGFLIMDGNGSLFGSVQGATRTVIQKFLVDLPK 180 The following BLAST results are available for this feature:
BLAST of FC930261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930261 ID=FC930261; Name=FC930261; organism=Citrus clementina; type=EST; length=689bpback to top |