FC930266

Overview
NameFC930266
Unique NameFC930266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length635
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930266_ssr34 microsatellite FC930266_ssr34:34..43. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:2..636. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930266 vs. ExPASy Swiss-Prot
Match: ENO_RHORB (Enolase OS=Rhodotorula rubra GN=ENO PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.928e-46
Identity = 109/187 (58.29%), Postives = 132/187 (70.59%), Query Frame = 1
Query:   88 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNK--NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVXASCF 633
            + I+ + +R ++DSRGNPTVEV++TT  G   R+ VPSGASTG++EALELRDG  S +LGKGV KAV+NVN  I PAL  A  D  +Q  ID ++++ LDGT N     K KLGANAIL VSLA  KAGA  K +PLYKHIA++S  K    VLPVP  NV+NGGSHAG  LA QEFMI+P  A  F
Sbjct:    1 MAISKIHSRYVYDSRGNPTVEVELTTEKG-TFRSIVPSGASTGVHEALELRDGDKSKWLGKGVLKAVANVNDTIAPALIEANIDVADQAKIDEFLLK-LDGTPN-----KAKLGANAILGVSLAAAKAGAAQKDVPLYKHIADISKAKEGKFVLPVPFQNVLNGGSHAGGDLAFQEFMIVPSGAPSF 180          
BLAST of FC930266 vs. ExPASy Swiss-Prot
Match: ENO_RHILW (Enolase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=eno PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.928e-46
Identity = 102/177 (57.63%), Postives = 120/177 (67.80%), Query Frame = 1
Query:   94 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVXA 624
            IT + AR+I DSRGNPTVEVDV   DG + RAAVPSGASTG +EA+ELRDGG  YLGKGV KAV   N  I  A+ G D   Q  IDN M+ +LDGT N     K +LGANAIL VSLA+ KA A    +PLY+++    G    +LPVP  N+INGG+HA N +  QEFMILPV A
Sbjct:    4 ITDIIAREILDSRGNPTVEVDVYLEDGSMGRAAVPSGASTGAHEAVELRDGGKRYLGKGVQKAVDAANTEIFDAIGGIDAENQIQIDNIMI-ELDGTPN-----KSRLGANAILGVSLAVAKAAAQASGLPLYRYV---GGASACLLPVPMMNIINGGAHADNPIDFQEFMILPVGA 171          
BLAST of FC930266 vs. ExPASy Swiss-Prot
Match: ENO_RHIL3 (Enolase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=eno PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.928e-46
Identity = 102/177 (57.63%), Postives = 120/177 (67.80%), Query Frame = 1
Query:   94 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVXA 624
            IT + AR+I DSRGNPTVEVDV   DG + RAAVPSGASTG +EA+ELRDGG  YLGKGV KAV   N  I  A+ G D   Q  IDN M+ +LDGT N     K +LGANAIL VSLA+ KA A    +PLY+++    G    +LPVP  N+INGG+HA N +  QEFMILPV A
Sbjct:    4 ITDIIAREILDSRGNPTVEVDVYLEDGSMGRAAVPSGASTGAHEAVELRDGGKRYLGKGVEKAVEAANTEIFDAIGGIDAENQIQIDNIMI-ELDGTPN-----KSRLGANAILGVSLAVAKAAAQASGLPLYRYV---GGASACLLPVPMMNIINGGAHADNPIDFQEFMILPVGA 171          
BLAST of FC930266 vs. ExPASy Swiss-Prot
Match: ENO_PYRKO (Enolase OS=Pyrococcus kodakaraensis GN=eno PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.928e-46
Identity = 108/180 (60.00%), Postives = 124/180 (68.89%), Query Frame = 1
Query:   94 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVXASCF 633
            IT V AR+I DSRGNPTVEV+V T    + RAAVPSGASTG +EALELRDGGS Y GKGV +AV NVN II P + G D T Q  ID  M+ +LDGT N     K  LGANAIL VSLA+ KA A+   +PLY++I    G    V+PVP  NVINGG HAGN+L  QEFMI+PV A  F
Sbjct:    7 ITNVIAREILDSRGNPTVEVEVYTPIS-MGRAAVPSGASTGTHEALELRDGGSRYHGKGVRRAVENVNKIIAPEIIGMDVTWQRDIDTLML-ELDGTEN-----KSNLGANAILGVSLAVAKAAANALGLPLYQYI---GGTNAYVMPVPMSNVINGGVHAGNELDFQEFMIMPVGADSF 176          
BLAST of FC930266 vs. ExPASy Swiss-Prot
Match: ENO_PSYA2 (Enolase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=eno PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.928e-46
Identity = 103/181 (56.91%), Postives = 127/181 (70.17%), Query Frame = 1
Query:   94 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVXASCF 633
            I  ++AR+I DSRGNPT+E DV  +DG + RAA PSGASTG  EALELRDG  S Y+GKGV KAV+NVN+ I  AL  K+ T Q AID+ M+  LDGT N     K  LGANAILAVSLA+ KA A  + +PL+++IA+L    +L +PVP  N+INGG HA N + +QEFMI PV  S F
Sbjct:   12 IKDIRAREILDSRGNPTIEADVILADGTIGRAAAPSGASTGSREALELRDGDKSRYMGKGVKKAVANVNSQIRSALMDKNVTAQQAIDDAMIA-LDGTDN-----KDNLGANAILAVSLAVAKAAAKSQSLPLHQYIADLRNQTSLTMPVPMMNIINGGEHADNTVDIQEFMIEPVGFSSF 186          
BLAST of FC930266 vs. ExPASy Swiss-Prot
Match: ENO_CARHZ (Enolase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=eno PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.928e-46
Identity = 102/181 (56.35%), Postives = 125/181 (69.06%), Query Frame = 1
Query:   94 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVXASCF 633
            I  V AR+I DSRGNPTVEVDV   DG   RAAVPSGASTG +EA+ELRD     YLGKGV++AV NVN+IIGP + G D  +Q  ID Y++ +LDGT N     K KLGANAIL VS+A+ KA A+   +PLY++   L G    VLP P  N++NGG HA N + +QEFMI+P+ AS F
Sbjct:    4 IREVIAREILDSRGNPTVEVDVILEDGTWGRAAVPSGASTGAFEAVELRDNDPQRYLGKGVTQAVENVNSIIGPEILGFDALDQVGIDEYLI-ELDGTPN-----KGKLGANAILGVSMAVAKAAANYLGLPLYRY---LGGTNARVLPAPMMNILNGGKHADNNVDIQEFMIMPLGASSF 175          
BLAST of FC930266 vs. ExPASy Swiss-Prot
Match: ENO1_LACLS (Enolase 1 OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=eno1 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.928e-46
Identity = 103/184 (55.98%), Postives = 130/184 (70.65%), Query Frame = 1
Query:   82 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVXASCF 633
            M +TI  + AR+IFDSRGNPTVEVDV  +DG + RAAVPSGASTG  EA+ELRDGG+   GK VSKAV+NVN  I  AL G+ P  Q  +D+ M+ +LDGT N     K +LGANAIL VS+AI +A A+ +KIPLY+++    G  +L LP P FNVINGG HA + + +QEF+I PV  + F
Sbjct:    1 MTVTIENIHAREIFDSRGNPTVEVDVRLTDGTLGRAAVPSGASTGDREAVELRDGGARLQGKDVSKAVANVNGEIYEALKGQSPFNQAKLDHLMI-ELDGTKN-----KSRLGANAILGVSMAIARAAANSEKIPLYRYL----GGVDLELPQPFFNVINGGVHADSGIDVQEFLITPVKRASF 174          
BLAST of FC930266 vs. ExPASy Swiss-Prot
Match: ENO_THEGJ (Enolase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=eno PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.130e-46
Identity = 107/180 (59.44%), Postives = 124/180 (68.89%), Query Frame = 1
Query:   94 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVXASCF 633
            ITAV AR+I DSRGNPTVEV+V T    + RAAVPSGASTG +EALELRDGG  + GKGV +AV NVN II P + G D T Q  ID  M+ +LDGT N     K  LGANAIL VSLA+ KA A+   +PLY++I    G    V+PVP  NVINGG HAGN+L  QEFMI+PV A  F
Sbjct:    7 ITAVVAREILDSRGNPTVEVEVYTPVS-MGRAAVPSGASTGTHEALELRDGGKRFHGKGVRRAVENVNKIIAPEIIGMDVTWQRDIDMLMI-ELDGTEN-----KSNLGANAILGVSLAVAKAAANALGLPLYQYI---GGTNAYVMPVPMSNVINGGVHAGNELDFQEFMIMPVGAKSF 176          
BLAST of FC930266 vs. ExPASy Swiss-Prot
Match: ENO_PYRAB (Enolase OS=Pyrococcus abyssi GN=eno PE=3 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 5.130e-46
Identity = 107/180 (59.44%), Postives = 124/180 (68.89%), Query Frame = 1
Query:   94 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVXASCF 633
            I AV AR+I DSRGNPTVEVDV T    + RAAVPSGASTG +EA+ELRDGG  Y GKGV +AV NVN II P L G D   Q  ID  ++ +LDGT N     K  LGANAILAVSLA+ KA A+  ++PLY++   L G    VLPVP  NVINGG HAGN L  QEFMI+P+ A+ F
Sbjct:    7 IVAVIAREILDSRGNPTVEVDVHTPIS-MGRAAVPSGASTGTHEAVELRDGGKRYHGKGVRRAVENVNKIIAPELVGMDVRWQREIDRLLI-ELDGTEN-----KSNLGANAILAVSLAVAKAAANALELPLYQY---LGGVNAYVLPVPLSNVINGGVHAGNDLDFQEFMIMPIGANSF 176          
BLAST of FC930266 vs. ExPASy Swiss-Prot
Match: ENO_PSEMY (Enolase OS=Pseudomonas mendocina (strain ymp) GN=eno PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.130e-46
Identity = 104/182 (57.14%), Postives = 122/182 (67.03%), Query Frame = 1
Query:   94 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVXASCF 633
            I  +K R++ DSRGNPTVE DV    G V  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKD T+Q A+D  M+ +LDGT N     K KLGANAILAVSLA  KA A  K +PLY HIA+L+G   +  +PVP  N+INGG HA N + +QEFM+ PV A  F
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVILEGGIVGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDATDQQALDRAMI-ELDGTEN-----KAKLGANAILAVSLAAAKAAAQAKGVPLYAHIADLNGTPGVYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKNF 179          
The following BLAST results are available for this feature:
BLAST of FC930266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_RHORB3.928e-4658.29Enolase OS=Rhodotorula rubra GN=ENO PE=1 SV=1[more]
ENO_RHILW3.928e-4657.63Enolase OS=Rhizobium leguminosarum bv. trifolii (s... [more]
ENO_RHIL33.928e-4657.63Enolase OS=Rhizobium leguminosarum bv. viciae (str... [more]
ENO_PYRKO3.928e-4660.00Enolase OS=Pyrococcus kodakaraensis GN=eno PE=3 SV... [more]
ENO_PSYA23.928e-4656.91Enolase OS=Psychrobacter arcticus (strain DSM 1730... [more]
ENO_CARHZ3.928e-4656.35Enolase OS=Carboxydothermus hydrogenoformans (stra... [more]
ENO1_LACLS3.928e-4655.98Enolase 1 OS=Lactococcus lactis subsp. cremoris (s... [more]
ENO_THEGJ5.130e-4659.44Enolase OS=Thermococcus gammatolerans (strain DSM ... [more]
ENO_PYRAB5.130e-4659.44Enolase OS=Pyrococcus abyssi GN=eno PE=3 SV=2[more]
ENO_PSEMY5.130e-4657.14Enolase OS=Pseudomonas mendocina (strain ymp) GN=e... [more]

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Properties
Property NameValue
Genbank descriptionC34005E12EF PostHarvC1 Citrus clementina cDNA clone C34005E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930266 ID=FC930266; Name=FC930266; organism=Citrus clementina; type=EST; length=635bp
GACTTAATCCAAGACTCTTCTCGCACTCACAGACTCTCTCTCTCGTTCTA
GATCTTTCTTCGGTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACTG
CCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGAG
GTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAG
CGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGCT
CTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCC
ATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTAT
TGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGTT
GGTGCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCT
ATCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATAT
TGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCA
ATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGAG
TTTATGATTCTTCCTGTANGAGCTTCCTGTTTCAA
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