FC930267

Overview
NameFC930267
Unique NameFC930267
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10359 contig Ccv1_Contig10359:2..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT2_RAT (ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 3.087e-29
Identity = 70/125 (56.00%), Postives = 82/125 (65.60%), Query Frame = 2 
Query:  314 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    D R  +W++FAGN             FVY LD+AR
Sbjct:   15 GGVAAAISKTAVAPIERVKLLLQVQHAS-KQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFAR 138
[Close]
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT2_MOUSE (ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 3.087e-29
Identity = 70/125 (56.00%), Postives = 82/125 (65.60%), Query Frame = 2 
Query:  314 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    D R  +W++FAGN             FVY LD+AR
Sbjct:   15 GGVAAAISKTAVAPIERVKLLLQVQHAS-KQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFAR 138
[Close]
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT2_HUMAN (ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 PE=1 SV=6)

HSP 1 Score: 128.642 bits (322), Expect = 3.087e-29
Identity = 70/125 (56.00%), Postives = 82/125 (65.60%), Query Frame = 2 
Query:  314 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    D R  +W++FAGN             FVY LD+AR
Sbjct:   15 GGVAAAISKTAVAPIERVKLLLQVQHAS-KQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFAR 138
[Close]
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT2_BOVIN (ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 3.087e-29
Identity = 70/125 (56.00%), Postives = 82/125 (65.60%), Query Frame = 2 
Query:  314 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    D R  +W++FAGN             FVY LD+AR
Sbjct:   15 GGVAAAISKTAVAPIERVKLLLQVQHAS-KQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFAR 138
[Close]
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT1_RABIT (ADP/ATP translocase 1 OS=Oryctolagus cuniculus GN=SLC25A4 PE=2 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 4.032e-29
Identity = 71/125 (56.80%), Postives = 82/125 (65.60%), Query Frame = 2 
Query:  314 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            GGV+AAVSKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGN             FVY LD+AR
Sbjct:   15 GGVAAAVSKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFAR 138
[Close]
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT1_RAT (ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc25a4 PE=1 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 5.266e-29
Identity = 70/125 (56.00%), Postives = 82/125 (65.60%), Query Frame = 2 
Query:  314 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            GG++AAVSKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGN             FVY LD+AR
Sbjct:   15 GGIAAAVSKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFAR 138
[Close]
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT1_MOUSE (ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 PE=1 SV=4)

HSP 1 Score: 127.872 bits (320), Expect = 5.266e-29
Identity = 70/125 (56.00%), Postives = 82/125 (65.60%), Query Frame = 2 
Query:  314 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            GG++AAVSKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGN             FVY LD+AR
Sbjct:   15 GGIAAAVSKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFAR 138
[Close]
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT1_BOVIN (ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=1 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 5.266e-29
Identity = 70/125 (56.00%), Postives = 82/125 (65.60%), Query Frame = 2 
Query:  314 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGN             FVY LD+AR
Sbjct:   15 GGVAAAISKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFAR 138
[Close]
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT3_PIG (ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 6.878e-29
Identity = 68/125 (54.40%), Postives = 82/125 (65.60%), Query Frame = 2 
Query:  314 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            GG++AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    D+   +W++FAGN             FVY LD+AR
Sbjct:   15 GGIAAAISKTAVAPIERVKLLLQVQHAS-KQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFAR 138
[Close]
BLAST of FC930267 vs. ExPASy Swiss-Prot
Match: ADT3_HUMAN (ADP/ATP translocase 3 OS=Homo sapiens GN=SLC25A6 PE=1 SV=4)

HSP 1 Score: 127.487 bits (319), Expect = 6.878e-29
Identity = 68/125 (54.40%), Postives = 82/125 (65.60%), Query Frame = 2 
Query:  314 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGTLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYAR 685
            GG++AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    D+   +W++FAGN             FVY LD+AR
Sbjct:   15 GGIAAAISKTAVAPIERVKLLLQVQHAS-KQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFAR 138
The following BLAST results are available for this feature:
BLAST of FC930267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ADT2_RAT3.087e-2956.00ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc2... [more]
ADT2_MOUSE3.087e-2956.00ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 P... [more]
ADT2_HUMAN3.087e-2956.00ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 P... [more]
ADT2_BOVIN3.087e-2956.00ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=... [more]
ADT1_RABIT4.032e-2956.80ADP/ATP translocase 1 OS=Oryctolagus cuniculus GN=... [more]
ADT1_RAT5.266e-2956.00ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc2... [more]
ADT1_MOUSE5.266e-2956.00ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 P... [more]
ADT1_BOVIN5.266e-2956.00ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=... [more]
ADT3_PIG6.878e-2954.40ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=... [more]
ADT3_HUMAN6.878e-2954.40ADP/ATP translocase 3 OS=Homo sapiens GN=SLC25A6 P... [more]

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Properties
Property NameValue
Genbank descriptionC34005F01EF PostHarvC1 Citrus clementina cDNA clone C34005F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930267 ID=FC930267; Name=FC930267; organism=Citrus clementina; type=EST; length=702bp
GACATTACGGAGGTCTCACACTAGGCGACCTTCTCAGGTCACCATCTTCA
GCTGCAAACATGGCAGATGGATCGTATCCATCCGTATTTCAGAAAATGCA
AGGCCAGTCATACTTCATTTCTGGGGTCTCCCCCAATTTGTATGCCCACA
ACTACAGTGTGGCAGGTTCCTTTGTTAATAGAGGATCACAGAATTCTTTT
TGGGCAGCAAGTCAGGGAACTGGCCTGGCACTTGTGTCTCCTGTTTCTCC
TATATTCGTACAAGCTCCATCAGAAAAAAAGTCTTTCTTCTTTTTTTGGT
GGATTTTCTCATGGGAGGAGTTTCAGCAGCTGTTTCCAAGACTGCAGCTG
CTCCTATTGAGCGGGTTAAGCTTTTGATTCAGAATCAAGATGAGATGATC
AAGAGTGGTCGGCTCTCGCATCCGTACAAGGGGATTTCTGATTGCTTTGG
TAGAACTGTTAAGGATGAAGGCACACTATCTCTTTGGAGAGGCAACACTG
CCAATGTTATCAGATACTTCCCTACCCAGGCCCTGAACTTTGCATTCAAG
GATTACTTTAAGAGGCTGTTTAACTTCAAGAAAGACAGAGATGGCTACTG
GAAGTGGTTTGCTGGGAACTTGGCATCTGGTGGGGCTGCTGGTGCTTCAT
CGCTTCTTTTTGTGTATTCGCTTGACTATGCAAGACACGTTTGGCAATGA
TG
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