FC930275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_CITFR (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Citrobacter freundii GN=gap PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.983e-15 Identity = 45/121 (37.19%), Postives = 68/121 (56.20%), Query Frame = 3 Query: 123 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFCCG 482 +V R +R D+E+VA+ND + DYM YM KYDS HG++ + ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMF G Sbjct: 1 IVFRAAQERSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-NGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKG 118
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_CORGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Corynebacterium glutamicum GN=gap PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 6.437e-15 Identity = 50/129 (38.76%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQR-DDVELVAVNDPFITTDYMTY--MFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD 461 +++ INGFGRIGR R +L+R DD+E+VAVND TD T + K+DS+ G+ E++ DD ++ G K + V+ R+P+ + WA + V+ESTG FT VIISAP+ + Sbjct: 3 IRVGINGFGRIGRNFFRAVLERSDDLEVVAVND---LTDNKTLSTLLKFDSIMGRLGQ-EVEYDDD-SITVGGKRIAVYAERDPKNLDWAAHNVDIVIESTGFFTDANAAKAHIEAGAKKVIISAPASN 126 HSP 2 Score: 21.9422 bits (45), Expect = 6.437e-15 Identity = 10/23 (43.48%), Postives = 11/23 (47.83%), Query Frame = 1 Query: 442 SQPPARMLLCFVVGVNEHEYKPE 510 S P + FV GVN Y PE Sbjct: 121 SAPASNEDATFVYGVNHESYDPE 143
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_PSEAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Pseudomonas aeruginosa GN=gap PE=3 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 6.508e-15 Identity = 46/129 (35.66%), Postives = 72/129 (55.81%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD 461 +++ INGFGRIGR V R + R+ +++VA+ND ++F+YDSVHG + E++ + + G++ + V +RNP E+PW G + V+E TG+FT V+ISAP KD Sbjct: 3 IRLAINGFGRIGRNVLRALYTGHYREQLQVVAIND-LGDAAVNAHLFQYDSVHGHFPG-EVEHDAESLRVMGDR-IAVSAIRNPAELPWKSLGVDIVLECTGLFTSRDKAAAHLQAGAGKVLISAPGKD 128
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_ESCBL (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Escherichia blattae GN=gap PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.508e-15 Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 3 Query: 123 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDA-PMFCCG 482 +V R +R D+E+VA+ND + +YM YM KYDS HG++ + ++VKD ++ G+K + V R+P + W E G E V E+TG+F V+++ PSKD+ PMF G Sbjct: 1 IVFRAAQERSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-NGTVEVKDGHLIVNGKK-IRVTAERDPANLKWNEAGVEVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDSTPMFVRG 118
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_ESCFE (Glyceraldehyde-3-phosphate dehydrogenase A (Fragment) OS=Escherichia fergusonii GN=gapA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.508e-15 Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 3 Query: 123 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFCCG 482 +V R +R D+E+VA+ND + DYM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMF G Sbjct: 1 IVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDG-TVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKG 118
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P2_RHOSH (Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhodobacter sphaeroides GN=gapB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.110e-14 Identity = 46/129 (35.66%), Postives = 70/129 (54.26%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQ--RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDA 464 +++ INGFGRIGR V R I++ R D+E+VA+ND + ++ ++DSVHG++ D + G P+ V +RNP E+PWA G + +E TG+FT V++SAP A Sbjct: 3 IRVAINGFGRIGRNVLRAIVESGRTDIEVVAIND-LGQVETNAHLLRFDSVHGRFP--AKVTSGDDWIDVGRGPIKVTAIRNPAELPWA--GVDMAMECTGIFTTKEKAAAHLQNGAKRVLVSAPCDGA 126
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_SERMA (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Serratia marcescens GN=gap PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.450e-14 Identity = 44/121 (36.36%), Postives = 68/121 (56.20%), Query Frame = 3 Query: 123 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDA-PMFCCG 482 +V R +R D+E+VA+ND + +YM YM KYDS HG++ + ++VKD ++ G K + V ++P + W E G + V E+TG+F V+++ PSKDA PMF G Sbjct: 1 IVFRAAQERSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-NGTVEVKDGHLVVNG-KTIRVTAEKDPANLKWNEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDATPMFVRG 118
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3PC_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGC PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.450e-14 Identity = 48/126 (38.10%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP 452 +K+ ING+GRIGR V R + R D+E+VA+ND ++ +YD+VHG++ E+ V D + G++ + V RNP E+PW E G + V+E TG+FT VIISAP Sbjct: 3 IKVAINGYGRIGRNVLRAHYEGGKRHDIEIVAIND-LGNAATNAHLTQYDTVHGRFPG-EVSVDGDAFRVNGDR-IRVLAQRNPAELPWGELGVDVVMECTGLFTSKEKASAHLRGGAKKVIISAP 125
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3PP_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, plasmid OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGP PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.473e-14 Identity = 48/126 (38.10%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP 452 +K+ ING+GRIGR V R + R D+E+VA+ND ++ +YD+VHG++ E+ V D + G++ + V RNP E+PW E G + V+E TG+FT VIISAP Sbjct: 3 IKVAINGYGRIGRNVLRAHYEGGKRHDLEIVAIND-LGNAATNAHLTQYDTVHGRFPG-EVSVDGDAFRVNGDR-IRVLAQRNPAELPWGELGVDVVMECTGLFTSKEKASAHLKGGAKKVIISAP 125
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_ESCVU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Escherichia vulneris GN=gap PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.473e-14 Identity = 44/121 (36.36%), Postives = 67/121 (55.37%), Query Frame = 3 Query: 123 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFCCG 482 +V R +R D+E+VA+ND + +YM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMF G Sbjct: 1 IVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRFDG-TVEVKDGHLVVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVRG 118 The following BLAST results are available for this feature:
BLAST of FC930275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930275 ID=FC930275; Name=FC930275; organism=Citrus clementina; type=EST; length=513bpback to top |