FC930275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3PA_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Chondrus crispus GN=GAPA PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.257e-11 Identity = 46/130 (35.38%), Postives = 66/130 (50.77%), Query Frame = 3 Query: 81 KVKIRINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMT--YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK 458 KV++ INGFGRIGR R R D +E+V +ND T+ T ++ KYDS+ G + +D T+ K + + RNP ++PW E + VVE+TGVF V+I+AP K Sbjct: 78 KVRVAINGFGRIGRNFIRCWAGRSDSNMEVVCIND---TSGVKTASHLLKYDSILGTFDADVSAGED--TISVNGKTIKIVSNRNPLQLPWKEMNIDIVVEATGVFVDAPGAGKHIEAGAKKVLITAPGK 202 HSP 2 Score: 21.1718 bits (43), Expect = 1.257e-11 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 1 Query: 472 FVVGVNEHEY 501 FVVGVNE +Y Sbjct: 209 FVVGVNEKDY 218
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.500e-11 Identity = 47/140 (33.57%), Postives = 68/140 (48.57%), Query Frame = 3 Query: 72 IMGKVKIRINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFCCG 482 + K+K+ INGFGRIGR R R D ++++A+ND +++ KYDS G + V D + G K + V RNP +PW + G + V+E TGVF V+I+AP K D P + G Sbjct: 54 VEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVKPVGTDGISVDG-KVIQVVSDRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVG 191
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_HALVA (Glyceraldehyde-3-phosphate dehydrogenase OS=Haloarcula vallismortis GN=gap PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.559e-11 Identity = 44/132 (33.33%), Postives = 67/132 (50.76%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG--EKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPM 470 V++ +NGFGRIGR V R L DDVE+V +ND ++ + Y +YDSV G+ + + DD L + +F +P ++PW + + E+TG+F V+ISAP K D P+ Sbjct: 6 VRVGLNGFGRIGRNVFRASLHSDDVEIVGINDVMDDSE-IDYFAQYDSVMGELEGASV---DDGVLTVDGTDFEAGIFHETDPTQLPWDDLDVDVAFEATGIFRTKEDASQHLDAGADKVLISAPPKGDEPV 133
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 2.559e-11 Identity = 47/137 (34.31%), Postives = 67/137 (48.91%), Query Frame = 3 Query: 81 KVKIRINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFCCG 482 ++K+ INGFGRIGR R R D ++++A+ND +++ KYDS G + V D + G K + V RNP +PW E G + V+E TGVF V+I+AP K D P + G Sbjct: 70 QLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVKPVGTDGISVDG-KVIKVVSDRNPANLPWKELGIDLVIEGTGVFVDREGAGRHITAGAKKVLITAPGKGDIPTYVVG 204
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_STAES (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.343e-11 Identity = 42/125 (33.60%), Postives = 68/125 (54.40%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK 458 +K+ INGFGRIGRL R I + +E+VAVND D + ++ KYD++ G++ E++V + + G K + F + ++PW + + V+E TG +T V+ISAP+K Sbjct: 3 IKVAINGFGRIGRLAFRRIQDVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVIEGGFRVNG-KEIKSFDEPDAGKLPWGDLDIDVVLECTGFYTDKEKAQAHIDAGAKKVLISAPAK 124
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.343e-11 Identity = 42/125 (33.60%), Postives = 68/125 (54.40%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK 458 +K+ INGFGRIGRL R I + +E+VAVND D + ++ KYD++ G++ E++V + + G K + F + ++PW + + V+E TG +T V+ISAP+K Sbjct: 3 IKVAINGFGRIGRLAFRRIQDVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVIEGGFRVNG-KEIKSFDEPDAGKLPWGDLDIDVVLECTGFYTDKEKAQAHIDAGAKKVLISAPAK 124
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: E4PD_SHEB2 (D-erythrose-4-phosphate dehydrogenase OS=Shewanella baltica (strain OS223) GN=epd PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.343e-11 Identity = 37/127 (29.13%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS 455 +++ ING+GRIGR + R + + R +++VA+N+ + + ++ +YD+ HG++ H ++K+ DD +L G+ + + +P ++PW E + V E+TGV V+IS PS Sbjct: 2 IRVAINGYGRIGRSILRALYESGKRQQMQIVAINE-LAKPEAIIHLTQYDTTHGRFAH-KVKLVDDH-MLIGDDAIKILHEPDPTKLPWHEMDIDIVYEATGVLLDRQSCEAHIHAGAKQVLISHPS 125
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: E4PD_PSEHT (D-erythrose-4-phosphate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=epd PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.725e-11 Identity = 34/104 (32.69%), Postives = 64/104 (61.54%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQR---DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 386 +K+ INGFGRIGR + R + + +++++VA+N+ + + ++ KYD+ HG++ +K+ +D + G+ + +F NP E+PW G + V+E TGV+ Sbjct: 3 IKLAINGFGRIGRNIVRALYESGLSNEIKIVAINE-LADPEAIAHLLKYDTSHGRF-FFPVKLGEDTISVAGDA-IALFCEPNPAELPWKTLGVDVVLECTGVY 103 The following BLAST results are available for this feature:
BLAST of FC930275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930275 ID=FC930275; Name=FC930275; organism=Citrus clementina; type=EST; length=513bpback to top |