FC930278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_ECHMU (Glyceraldehyde-3-phosphate dehydrogenase OS=Echinococcus multilocularis PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.622e-29 Identity = 68/144 (47.22%), Postives = 89/144 (61.81%), Query Frame = 3 Query: 84 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 515 K ++GINGFGRIGRLV R + + V +VAVNDPFI +YM YMFKYDS HG++K ++KV D L+ +TVF + +PW++ GAEY+VESTG+ T VIISAPS D+ VGVN +Y P + Sbjct: 2 KPQVGINGFGRIGRLVLRAAVASNSVNVVAVNDPFIDLEYMVYMFKYDSAHGRYK-GDVKV-DGGKLVIDSHRITVFQEMSASAVPWSQAGAEYIVESTGINTTVEKASAHFQGGAKKVIISAPSADSSHVRVGVNHEKYDPSM 143
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_DICDI (Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyostelium discoideum GN=gpdA PE=1 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 6.163e-29 Identity = 63/140 (45.00%), Postives = 85/140 (60.71%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYK 506 V IGINGFGRIGRLV R L+ + ++A+N+PF+ YM YMFKYDS HG++K + + + + VF ++P I W+ GAEY+VESTG+F V+ISAPS DAPM+V+GVNE Y+ Sbjct: 3 VPIGINGFGRIGRLVLRASLENPECRVLAINEPFMDVKYMVYMFKYDSTHGRFKGTVEDINGE--FVVNGNKIHVFAEKDPANIKWSSVGAEYIVESTGLFLSTEKAGVHLKGGAKKVVISAPSTDAPMYVMGVNEETYE 140
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_MESAU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mesocricetus auratus GN=GAPDH PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 8.049e-29 Identity = 67/134 (50.00%), Postives = 85/134 (63.43%), Query Frame = 3 Query: 114 RIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 515 RIGRLV R V++VA+NDPFI +YM YMF+YDS HG++K +K ++ K ++ G K +T+F R+P I W + GAEYVVESTGVFT VIISAPS DAPMFV+GVN +Y L Sbjct: 1 RIGRLVTRAAFTSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFKG-TVKAENGKLVING-KAITIFQERDPTNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHDKYDNSL 132
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_SHEEP (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Ovis aries GN=GAPDH PE=2 SV=4) HSP 1 Score: 125.561 bits (314), Expect = 1.373e-28 Identity = 66/133 (49.62%), Postives = 83/133 (62.41%), Query Frame = 3 Query: 117 IGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 515 IGRLV R V++VA+NDPFI YM YMF+YDS HG++ H +K ++ K ++ G K +T+F R+P I W + GAEYVVESTGVFT VIISAPS DAPMFV+GVN +Y L Sbjct: 1 IGRLVTRAAFNTGKVDIVAINDPFIDLHYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKKVIISAPSADAPMFVMGVNHEKYNNTL 131
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_BOLED (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Boletus edulis GN=GPD PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.793e-28 Identity = 65/123 (52.85%), Postives = 79/123 (64.23%), Query Frame = 3 Query: 144 LQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 512 L+ ++ + AVNDPFI DYM YMFKYDSVHG+++ E+ KD K ++ G K +TVF R+P IPW GA+YVVESTGVFT VIISAPS DAPMFV GVN Y P+ Sbjct: 1 LENPEINITAVNDPFIDLDYMVYMFKYDSVHGRFEG-EVSTKDGKLVING-KAITVFAERDPANIPWGTVGAQYVVESTGVFTTIEKASAHLKGGAKKVIISAPSSDAPMFVCGVNLDAYDPK 121
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_AMAMU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Amanita muscaria GN=GPD PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.217e-28 Identity = 62/119 (52.10%), Postives = 79/119 (66.39%), Query Frame = 3 Query: 156 DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 512 D+++VA+NDPFI YM YMFKYDSVHG++ ++ KD K L +KP+TVF R+P +IPW GAEY+VESTGVFT ++ISAPS DAPMFV GVN +Y P+ Sbjct: 4 DLDVVAINDPFIDLAYMVYMFKYDSVHGRFSG-SVETKDGK-LWINQKPITVFRKRDPVQIPWGSAGAEYIVESTGVFTTTEKASAHLKGGAKKIVISAPSADAPMFVCGVNLDKYDPK 120
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_GIALA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Giardia lamblia GN=GAP1 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 8.899e-28 Identity = 65/141 (46.10%), Postives = 84/141 (59.57%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 509 +++GINGFGRIGR+ R L D V++VA+NDPF +YM YM KYD+VHG++ + +D + G K ++VF PEEIPW +T + V+E TG FT VIISAPS DAPMFV G N Y P Sbjct: 3 IRLGINGFGRIGRMALRASLNIDGVQVVAINDPFTDCEYMEYMLKYDTVHGRF-DGTIAHSEDSITVNGNK-ISVFKSMKPEEIPWGKTQVDIVLECTGRFTTKKDAELHITGGCKRVIISAPSADAPMFVCGCNLETYDP 141
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P3_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhizomucor racemosus GN=GPD3 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.162e-27 Identity = 67/146 (45.89%), Postives = 87/146 (59.59%), Query Frame = 3 Query: 78 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 515 M + GINGF L+ V++VA+NDPFI +YM YMFKYDS HG++K ++ KD K ++ G + + V R+P +IPW GA+YV+ESTGVFT VIISAPS DAPMFVVGVN +Y +L Sbjct: 1 MSTINTGINGFRSHWPYCLACSLENPKVKVVAINDPFIDLEYMVYMFKYDSTHGRFKG-TVEHKDGKLVVNGHE-IAVHAERDPAQIPWGSHGADYVIESTGVFTTKDAASAHLKGGAKKVIISAPSADAPMFVVGVNLDKYTSDL 144
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P2_DROSU (Glyceraldehyde-3-phosphate dehydrogenase 2 (Fragment) OS=Drosophila subobscura GN=Gapdh2 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.589e-27 Identity = 66/134 (49.25%), Postives = 82/134 (61.19%), Query Frame = 3 Query: 114 RIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 515 RIGRLV R + + +VAVNDPFI +YM Y+FK+DS HG++K V + L+ + +TVF R+P I WA GAEYVVESTGVFT V+ISAPS DAPMFV GVN YKP++ Sbjct: 1 RIGRLVLRAAIDKG-ASVVAVNDPFIDVNYMVYLFKFDSTHGRFKG--TVVAEGGFLVVNGQKITVFSERDPANINWASAGAEYVVESTGVFTTIEKASTHLKGGAKKVVISAPSADAPMFVCGVNLDAYKPDM 131
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_MASBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Mastigamoeba balamuthi GN=GAPD PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 4.416e-27 Identity = 67/148 (45.27%), Postives = 87/148 (58.78%), Query Frame = 3 Query: 90 KIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQW------KHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 512 ++GINGFGRIGRLV RV+L R +V +NDPFITTD M Y+FKYD+VHG++ K +L++ TL + V +NP EIPW + E V+ES+G FT V+I+APS DAPMFV GVN K + Sbjct: 4 RVGINGFGRIGRLVLRVLLSRGMPANVVLINDPFITTDAMAYIFKYDTVHGRFPGTVVGKEGKLEI----TLNGHVYDIAVSACKNPAEIPWGASNVEVVIESSGAFTTMEKAHLHQQGGAKKVLITAPSADAPMFVYGVNHQSLKAD 147 The following BLAST results are available for this feature:
BLAST of FC930278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930278 ID=FC930278; Name=FC930278; organism=Citrus clementina; type=EST; length=515bpback to top |