FC930280

Overview
NameFC930280
Unique NameFC930280
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3496 contig Ccv1_Contig3496:123..846. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17
Identity = 57/161 (35.40%), Postives = 82/161 (50.93%), Query Frame = 3
Query:  147 RRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAH-GHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFS 626
            RRLPPGP  +PVIG L  LG  PH +LAK+AK +GPIM LK G    VV S+   AK  L+  D +F NR  P+A   H  ++   M + P    W+ LRK+ N H    + L+   ++R  ++  +L  + +    G  I +         N+I   + S
Sbjct:   34 RRLPPGPEGWPVIGALPLLGGMPHVALAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRP-PNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMFDASHVGERIVVADMLTFAMANMIGQVMLS 193          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17
Identity = 53/191 (27.75%), Postives = 100/191 (52.36%), Query Frame = 3
Query:   54 MDMVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIF 623
            M ++S   ++ F ++L     Y      S +++LPPGP   P IG++  L G +PH+ L  LAK +GP+M L+ G+V+ VV +S  MAKE+L+  D +F +R    A+    +    + + P    W+ +RKIC +   S++ + +   +R  ++  L+  +Q +  +G  ++  +     T ++   + F
Sbjct:    1 MQLISIFLFICFLFLLRKWKKYSKN---SQTKKLPPGPWKLPFIGSMHHLAGGRPHRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQSSSSSGELVNFKERVIWFTSSMTCRSAF 188          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17
Identity = 47/173 (27.17%), Postives = 92/173 (53.18%), Query Frame = 3
Query:   96 ILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR--TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLI 608
            +L +  + F +  K+    LPP P+  P+IGNL  L   PH+   KL+  +GP++ L+ G V  VV SS+  A+ +L+  D   C+R  T+     ++G  +  + + P    WR +RK+     FSS+++ + +++R +++  ++  V E+    + + + +  F  T ++I
Sbjct:   12 LLTIVSSIFLKQNKTSKFNLPPSPSSLPIIGNLHHLAGLPHRCFHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLECCSRPKTVGSGKLSYGFKD--ITFAPYGEYWREVRKLAVIELFSSKKVQSFRYIREEEVDFVVKKVSESALKQSPVDLSKTFFSLTASII 182          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17
Identity = 52/179 (29.05%), Postives = 86/179 (48.04%), Query Frame = 3
Query:  135 KSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR---TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKLRE 662
            K   + LPP P   P+IG+L  +   PH+   KL+  HGPIM L  G V  VV S+A  AKE L+  + +F NR    +     A+   +F   + P    W+ ++K+C S   S R +D    +R+++ +  ++ V     AG A+  G      + N++S    S   ++  ++  E
Sbjct:   23 KQSKKNLPPSPKALPIIGHLHLVSPIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVFRKGVAGEAVDFGDELMTLSNNIVSRMTLSQKTSENDNQAEE 201          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.673e-17
Identity = 59/216 (27.31%), Postives = 108/216 (50.00%), Query Frame = 3
Query:   54 MDMVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADP---TSKLRESLSKQLGYD 689
            M +VS   ++ F ++L     Y +    S +++LPPGP   P IG +  L G  PH+ L  LA+ +GP+M L+ G+V+ VV +S  MAK++L+  D +F +R    A+    ++   + + P    WR +RKIC     S++ + +   +R  ++  L+  +Q    +G  ++  +     T ++   + F   L +       +RE +S   G+D
Sbjct:    1 MQLVSIFLFISFLFLLRKWKKYLNN---SQTKKLPPGPWKLPFIGGMHHLAGGLPHRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSIQPCFTSGELVNFTERIIWFTSSMTCRSAFGQVLKEQEVFIKLIREVISLAEGFD 213          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.796e-17
Identity = 59/211 (27.96%), Postives = 101/211 (47.87%), Query Frame = 3
Query:   96 ILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGD-KPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEF------GMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKLRESLSKQLGYDGRAGKL 707
            +  V L +  +  K+   +LPPGP+P PVIGNLL+L    P +  A  AK +GPI+S + G  T VV SSA +AKE+L+ QD +F +R        H  HEF       M        +R +RK+  +H FS  ++   +H+R ++ + ++  + +       + I +     T +++    F     +   +++  +    G     GK+
Sbjct:   11 LAAVLLFFLYQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRP------PHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKI 215          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.796e-17
Identity = 59/180 (32.78%), Postives = 85/180 (47.22%), Query Frame = 3
Query:  138 SGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLL--AYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKLRESLS 671
            S    LPPGPT +P+IG L  LG  PH SLA +A  +GPIM LK G   TVV S+   A+  L+  D +F NR I        ++   M +      W+ LRK+C+ H    + L+   H++  ++  +L   Y Q +      + + +       N+I   I S      TSKL  S S
Sbjct:   33 SHHHHLPPGPTGWPIIGALPLLGTMPHVSLADMAVKYGPIMYLKLGSKGTVVASNPKAARAFLKTHDANFSNRPIDGGPTYLAYNAQDMVFAEYGPKWKLLRKLCSLHMLGPKALEDWAHVKVSEVGHMLKEMYEQSSKSVPVPVVVPEMLTYAMANMIGRIILSRRPFVITSKLDSSAS 212          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.796e-17
Identity = 55/210 (26.19%), Postives = 108/210 (51.43%), Query Frame = 3
Query:   81 LLFSWILVVALNYFSRGFKS-GSRRLPPGPTPYPVIGNLLELG---DKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADP---TSKLRESLSKQLGYD 689
            ++ ++ + + L++  + +K   S +LPPGP   P+IGNL +L      P ++L KL + +GP+M L+ G+++T+V SS  MA E+++  D  F  R    A     +    + + P    WR +RKIC     S++++ +  H+R+ + + L+  +  +  AG+ I +    F      +S   F  +  D     S +R++++   G++
Sbjct:    8 IVITFFVFLLLHWLVKTYKQKSSHKLPPGPWRLPIIGNLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIHSS--AGSPIDLSGKLFSLLGTTVSRAAFGKENDDQDEFMSLVRKAITMTGGFE 215          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.796e-17
Identity = 45/132 (34.09%), Postives = 75/132 (56.82%), Query Frame = 3
Query:  156 PPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR---TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQE 542
            PP P   PV+GNL +LG  PH+SL  L++ +GP+M L FG V  +V SS   A+EI++NQD +F NR   +IP  +    H    + + P    WR +R IC     S++++ + + +R ++   ++  + +
Sbjct:   28 PPSPPKLPVLGNLHQLGTFPHRSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNH---DVAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEETSIMVEKIMQ 156          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.264e-17
Identity = 53/164 (32.32%), Postives = 83/164 (50.61%), Query Frame = 3
Query:  138 SGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAH-GHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFS 626
            S   RLPPGP  +PV+G L  LG  PH +LA +AK +GP+M LK G     V S+   AK  L+  D +F NR  P+A   H  ++   M +      W+ LRK+ N H    + L   + +R+K++  +L  + E+ R G  + + +       N++   + S
Sbjct:   32 SRRHRLPPGPIGWPVLGALRLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRP-PNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYMLYAMAESGRHGQPVVVSEMLTYAMANMLGQVMLS 194          
The following BLAST results are available for this feature:
BLAST of FC930280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
C75A2_SOLME1.262e-1735.40Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C71D6_SOLCH1.262e-1727.75Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71B2_ARATH2.153e-1727.17Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C93A1_SOYBN2.812e-1729.05Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71D7_SOLCH3.673e-1727.31Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C83A1_ARATH4.796e-1727.96Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C75A6_CAMME4.796e-1732.78Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71D8_SOYBN4.796e-1726.19Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71A6_NEPRA4.796e-1734.09Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C75A7_EUSGR6.264e-1732.32Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]

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Properties
Property NameValue
Genbank descriptionC34005G04EF PostHarvC1 Citrus clementina cDNA clone C34005G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930280 ID=FC930280; Name=FC930280; organism=Citrus clementina; type=EST; length=721bp
ACACCTGAATTTGGTGTTTACAAGAGCTTCAACAAAAGAGAGCGAGATTA
AAGATGGATATGGTAAGCTGCGTACCATGGCTTCTATTCTCGTGGATTTT
GGTCGTCGCTTTAAATTACTTTTCAAGAGGATTCAAATCTGGATCCAGAA
GGCTTCCACCGGGACCGACGCCTTATCCGGTGATCGGAAACCTCCTGGAA
CTCGGCGACAAACCTCACAAGTCACTTGCTAAACTTGCCAAGATTCATGG
CCCCATAATGAGTCTAAAATTTGGCCAGGTGACCACAGTTGTCTTTTCTT
CTGCAGCCATGGCCAAAGAAATCCTTCAAAATCAAGACACATCTTTCTGT
AATCGAACGATCCCAGACGCAATCTACGCCCACGGCCATCATGAATTCGG
GATGCCCTGGCTGCCTGTGGCGACACTGTGGAGAAATCTTCGAAAAATAT
GCAACTCACATGCTTTCTCTAGTCGCCAACTCGATGCCAATCAGCACCTT
CGGCGTAAGAAAATCCAAGATCTTCTAGCTTATGTCCAAGAAAATTGCCG
TGCAGGTACAGCAATACATATTGGCCAAGCTGCTTTCGGCACTACGCTTA
ATTTGATATCCAACACAATTTTTTCTATTGACTTGGCTGATCCCACATCA
AAACTGCGCGAGAGTTTAAGCAAACAATTGGGGTATGATGGAAGAGCTGG
AAAGCTACTTTGTCGATTTTT
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