FC930280

Overview
NameFC930280
Unique NameFC930280
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3496 contig Ccv1_Contig3496:123..846. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13
Identity = 50/185 (27.03%), Postives = 93/185 (50.27%), Query Frame = 3
Query:  147 RRLPPGPTPYPVIGNL-LELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSI---DLADPTSKLRESLSKQLGYD 689
            + LPPGP   P++G+L L  G  P  ++A +AK +GP+  ++ G+V +VV SS    KE ++  D +  +R          +    + + P +  WR +RKIC S   S+R + +   +R+ ++  LL ++Q +  AG  + + +     T ++I    F     D  +    +++SLS   G++
Sbjct:   32 QNLPPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSS--AGETVDMTERIATLTCSIICRAAFGAIINDHEELVELVKDSLSMASGFE 214          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.488e-13
Identity = 47/184 (25.54%), Postives = 85/184 (46.20%), Query Frame = 3
Query:   96 ILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR--TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLAD 641
            I +V+L +  +  K     LPP P  +PVIGNL ++G+ PH+S  +LA+  G +M L FG V   V SS   A+E+L+  D   C R   +   + + G  +  + + P    WR  RK      F  +++    ++  ++   L+  + E+      + + ++ F    +++    F     D
Sbjct:   11 ITLVSLIFVVKKIKHSKWDLPPSPPTFPVIGNLHQVGELPHRSFQRLAERTGHVMLLHFGFVPVTVISSREAAEEVLRTHDLKCCTRPKLVGSRLISRGFKD--ISFTPYGEEWRERRKFLVRELFCFKKVQYFGYIVEEECNLLVKKLTESAVGRPPVDLSKSLFWLAASILFRIAFGQSFHD 192          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.167e-13
Identity = 36/133 (27.07%), Postives = 71/133 (53.38%), Query Frame = 3
Query:  150 RLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENC 548
            + PPGP+P P++GNL ++     +   + A+ +GPI+S+  G +  VV SSA +AKE+L+  D    +R    +  A   +   + W      +  +RK+C    F+ ++L++ + +R  ++  ++  V  +C
Sbjct:   26 KFPPGPSPKPIVGNLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDC 158          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13
Identity = 54/225 (24.00%), Postives = 110/225 (48.89%), Query Frame = 3
Query:   48 LKMDMVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAY----------VQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKLRESLSKQLGYD 689
            +++D++S +  L+ ++I+ + +N + +      + LPP P   PVIG+L  L G  P      +A+ +GP+  ++ G+V +VV SSA  AK+ ++  D +F +R          + +  + + P    WR +R+IC +   S + + +  ++R+++I+ L+            V E     + + + +AAFG+ L          D       ++ESL+   G++
Sbjct:    1 MELDLLSAIIILVATYIVSLLINQWRKS--KSQQNLPPSPPKLPVIGHLHFLWGGLPQHVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGSSGGAPVDVTEEVSKMSCVVVCRAAFGSVLK---------DQGSLAELVKESLALASGFE 214          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13
Identity = 54/225 (24.00%), Postives = 110/225 (48.89%), Query Frame = 3
Query:   48 LKMDMVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAY----------VQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKLRESLSKQLGYD 689
            +++D++S +  L+ ++I+ + +N + +      + LPP P   PVIG+L  L G  P      +A+ +GP+  ++ G+V +VV SSA  AK+ ++  D +F +R          + +  + + P    WR +R+IC +   S + + +  ++R+++I+ L+            V E     + + + +AAFG+ L          D       ++ESL+   G++
Sbjct:    1 MELDLLSAIIILVATYIVSLLINQWRKS--KSQQNLPPSPPKLPVIGHLHFLWGGLPQHVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGSSGGAPVDVTEEVSKMSCVVVCRAAFGSVLK---------DQGSLAELVKESLALASGFE 214          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13
Identity = 45/157 (28.66%), Postives = 81/157 (51.59%), Query Frame = 3
Query:  153 LPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR---TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQ--ENCRAGTAIHIGQAAFGTTLNLI 608
            LPP P   PVIGNL +L    H+SL  L+  +GP+M L FG+   ++ SSA +A +IL+  D    NR    + D I   G     + + P    W+ ++ IC  +  S++ + + + +R  +I+ ++  V+   +C   + +++ Q     T ++I
Sbjct:   33 LPPSPWRLPVIGNLHQLSLNTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGR---DVAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVENASSCSPPSPVNLSQLFMTLTNDII 186          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13
Identity = 41/157 (26.11%), Postives = 78/157 (49.68%), Query Frame = 3
Query:  153 LPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIF 623
            LPP P   PVIGNL +L   PH+SL  L+  +GP+M L FG+V  +V SS+ +A ++++  D    NR     I    +    + + P    WR ++ +C  H  + + + +   +R ++   ++  V++     + +++ +     T ++ S   F
Sbjct:   32 LPPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGREVVFSPYGDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKVEKASSDSSPLNLSKLLITLTSDVASRVSF 188          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.223e-12
Identity = 56/167 (33.53%), Postives = 84/167 (50.30%), Query Frame = 3
Query:   99 LVVALNYFSRG--FKSGSRRLPPGPTPYPVIGNL-LELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAH--GHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQA 581
            L++ L  F RG  +KSG    P     +P+IG+L L LG K PHK+L  LA  +GPI S+K G    VV S+  MAKE     D +    ++PD I A+   ++   +   P    WR LRKI  S   S  +++   H+R  ++Q  +  +  + R+   +  G A
Sbjct:   17 LILLLYLFLRGGSWKSGEEGPPTVAGAWPIIGHLPLLLGSKTPHKTLGDLADKYGPIFSIKIGAKNAVVVSNWEMAKECYTTNDIAV--SSLPDLISANLLCYNRSMIVVAPYGPYWRQLRKILMSEFLSPSRVEQLHHVRVSEVQSSITELFRDWRSNKNVQSGFA 181          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12
Identity = 45/181 (24.86%), Postives = 94/181 (51.93%), Query Frame = 3
Query:   81 LLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR---TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQE-NCRAG-TAIHIGQAAFGTTLNLI 608
            L  + +L + L    +   + +  LPP P   PVIGNL +L    H+SL  L+  +GP+M L FG+   ++ SSA +A ++++  D    NR    + D I + G     + + P    WR ++ IC  +  +++ + + + +R ++I+ ++  +++ +C +  + +++ Q     T ++I
Sbjct:    8 LCLTTLLALLLKSILKRTATKNFNLPPSPWRLPVIGNLHQLSLHTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGR---DVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSSSPSPVNLSQILMTLTNDII 185          
BLAST of FC930280 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.085e-12
Identity = 52/173 (30.06%), Postives = 87/173 (50.29%), Query Frame = 3
Query:   54 MDMVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGT 560
            MD++     LL S++ ++     S+  +    +LPPGP P PV GN L++GD   H++L  LAK  G I+ L+ GQ   VV SS  ++KE+L  Q   F +RT   + D     G     M +      WR +R+I     F+++ +   ++   ++   ++  V++N  A T
Sbjct:    1 MDLLLLEKTLLGSFVAILVAILVSK-LRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSRTRNVVFDIFTGKGQ---DMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPGAAT 169          
The following BLAST results are available for this feature:
BLAST of FC930280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
C7D95_MENGR4.202e-1327.03Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71BG_ARATH5.488e-1325.54Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C98A3_ARATH7.167e-1327.07Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C71DI_MENSP9.361e-1324.00Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR9.361e-1324.00Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C71AJ_ARATH9.361e-1328.66Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C71AF_ARATH9.361e-1326.11Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C82A2_SOYBN1.223e-1233.53Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C71AK_ARATH1.597e-1224.86Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
TCMO_POPTM2.085e-1230.06Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]

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Properties
Property NameValue
Genbank descriptionC34005G04EF PostHarvC1 Citrus clementina cDNA clone C34005G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930280 ID=FC930280; Name=FC930280; organism=Citrus clementina; type=EST; length=721bp
ACACCTGAATTTGGTGTTTACAAGAGCTTCAACAAAAGAGAGCGAGATTA
AAGATGGATATGGTAAGCTGCGTACCATGGCTTCTATTCTCGTGGATTTT
GGTCGTCGCTTTAAATTACTTTTCAAGAGGATTCAAATCTGGATCCAGAA
GGCTTCCACCGGGACCGACGCCTTATCCGGTGATCGGAAACCTCCTGGAA
CTCGGCGACAAACCTCACAAGTCACTTGCTAAACTTGCCAAGATTCATGG
CCCCATAATGAGTCTAAAATTTGGCCAGGTGACCACAGTTGTCTTTTCTT
CTGCAGCCATGGCCAAAGAAATCCTTCAAAATCAAGACACATCTTTCTGT
AATCGAACGATCCCAGACGCAATCTACGCCCACGGCCATCATGAATTCGG
GATGCCCTGGCTGCCTGTGGCGACACTGTGGAGAAATCTTCGAAAAATAT
GCAACTCACATGCTTTCTCTAGTCGCCAACTCGATGCCAATCAGCACCTT
CGGCGTAAGAAAATCCAAGATCTTCTAGCTTATGTCCAAGAAAATTGCCG
TGCAGGTACAGCAATACATATTGGCCAAGCTGCTTTCGGCACTACGCTTA
ATTTGATATCCAACACAATTTTTTCTATTGACTTGGCTGATCCCACATCA
AAACTGCGCGAGAGTTTAAGCAAACAATTGGGGTATGATGGAAGAGCTGG
AAAGCTACTTTGTCGATTTTT
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