FC930285
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930285 vs. ExPASy Swiss-Prot
Match: ISPH_PROM0 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9301) GN=ispH PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.354e-39 Identity = 73/138 (52.90%), Postives = 98/138 (71.01%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV 671 D + FR +L SD YNRRGF + + + + Y SD+I +++NGF YT G + +KLA+++GFCWGVERAV +AYE R+ +P E IWITNEIIHNP+VN L +M V+ I + G K F +V+ GDVV+LPAFGA V Sbjct: 2 DTQAFRRSLHHSDRYNRRGFDSPTKRAQALEEAYQSDLISSIRDNGFTYTKGRLNIKLAQAFGFCWGVERAVAMAYETRRHYPNENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPAFGATV 139
BLAST of FC930285 vs. ExPASy Swiss-Prot
Match: ISPH_PROM9 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9312) GN=ispH PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.720e-39 Identity = 72/138 (52.17%), Postives = 97/138 (70.29%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV 671 D + FR +L SD YNRRGF + + + + Y SD+I +++NGF Y G + +KLA+++GFCWGVERAV +AYE R+ +P E IWITNEIIHNP+VN L +M V+ I + G K F +V+ GDVV+LPAFGA V Sbjct: 2 DTQAFRRSLHHSDRYNRRGFDSPTKRAQALEEAYQSDLISSIRDNGFTYNKGRLNIKLAKAFGFCWGVERAVAMAYETRRHYPNENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPAFGATV 139
BLAST of FC930285 vs. ExPASy Swiss-Prot
Match: ISPH_TRIEI (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Trichodesmium erythraeum (strain IMS101) GN=ispH PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.497e-38 Identity = 69/138 (50.00%), Postives = 102/138 (73.91%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV 671 D K F L +S+NYNR+GFGH +E LM Y S++I++++EN + G V +KLA+++GFCWGVER+V +AYE R+ FP ++IWI+ E+IHNP+VN+ +++M ++ IPV +G+K F V DVV+LPAFGA+V Sbjct: 2 DTKAFTRALKKSENYNRQGFGHAQEVATLMQSAYKSNLIQQIRENNYTLQRGEVTIKLAKTFGFCWGVERSVAMAYETRQHFPNQQIWISYELIHNPSVNQDMKDMEIKFIPVIDGQKDFSVAGNNDVVILPAFGASV 139
BLAST of FC930285 vs. ExPASy Swiss-Prot
Match: ISPH_PROMM (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9313) GN=ispH PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.497e-38 Identity = 74/138 (53.62%), Postives = 96/138 (69.57%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV 671 D + F+ +L S+ YNRRGFG E + + Y S +I +++NG+ G ++VKLAE++GFCWGVERAV +AYE R+ +P E+IWITNEIIHNP+VN+ L EM V I E G K F VN GDVV+LPAFGA V Sbjct: 2 DTQAFKRSLHHSERYNRRGFGRANEVASNLEKAYQSSLIGSIRDNGYVLQHGRLQVKLAEAFGFCWGVERAVAMAYETRRHYPSERIWITNEIIHNPSVNEHLREMDVLFIHAEGGVKDFSCVNDGDVVILPAFGATV 139
BLAST of FC930285 vs. ExPASy Swiss-Prot
Match: ISPH_PROMT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain NATL2A) GN=ispH PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.356e-38 Identity = 75/138 (54.35%), Postives = 96/138 (69.57%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV 671 D + F+ L +SD YNRRGFG + + + + Y S +I ++ENG G +KVKLAE++GFCWGVER+V +AYE RK +P E+IWITNEIIHNP+VN L +M V I E+G K F VV GDVV+LPAFGA V Sbjct: 2 DTQAFKQTLHKSDRYNRRGFGSANKRAQALAEAYQSGLIGSIRENGNLLEHGRLKVKLAEAFGFCWGVERSVAMAYETRKHYPNERIWITNEIIHNPSVNDHLRKMNVLFISEEKGVKDFSVVKDGDVVILPAFGATV 139
BLAST of FC930285 vs. ExPASy Swiss-Prot
Match: ISPH_PROM1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain NATL1A) GN=ispH PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.356e-38 Identity = 75/138 (54.35%), Postives = 96/138 (69.57%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV 671 D + F+ L +SD YNRRGFG + + + + Y S +I ++ENG G +KVKLAE++GFCWGVER+V +AYE RK +P E+IWITNEIIHNP+VN L +M V I E+G K F VV GDVV+LPAFGA V Sbjct: 2 DTQAFKQTLHKSDRYNRRGFGSANKRAQALAEAYQSGLIGSIRENGNLLEHGRLKVKLAEAFGFCWGVERSVAMAYETRKHYPNERIWITNEIIHNPSVNDHLRKMNVLFISEEKGVKDFSVVKDGDVVILPAFGATV 139
BLAST of FC930285 vs. ExPASy Swiss-Prot
Match: ISPH_PROMP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ispH PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.689e-38 Identity = 71/138 (51.45%), Postives = 96/138 (69.57%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV 671 D + FR +L SD YNRRGF + + + + Y SD+I ++ N F Y G + +KLA+++GFCWGVERAV +AYE R+ +P+E IWITNEIIHNP+VN L +M V+ I + G K F +V+ GDVV+LPAFGA V Sbjct: 2 DTQAFRRSLHHSDRYNRRGFDSPTKRAQALEEAYQSDLITSIRNNSFTYKKGRLNIKLAQAFGFCWGVERAVAMAYETRRHYPDENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSDGDVVILPAFGATV 139
BLAST of FC930285 vs. ExPASy Swiss-Prot
Match: ISPH_PROM3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9303) GN=ispH PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.689e-38 Identity = 73/138 (52.90%), Postives = 96/138 (69.57%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV 671 D + F+ +L S+ YNRRGFG E + + Y S +I +++NG+ G ++VKLAE++GFCWGVERAV +AYE R+ +P E+IWITNEIIHNP+VN+ L EM V I E G K F V+ GDVV+LPAFGA V Sbjct: 2 DTQAFKRSLHHSERYNRRGFGRANEVASNLEKAYQSSLIGSIRDNGYVLQHGRLQVKLAEAFGFCWGVERAVAMAYETRRHYPSERIWITNEIIHNPSVNEHLREMDVLFIHAEGGVKDFSCVSDGDVVILPAFGATV 139
BLAST of FC930285 vs. ExPASy Swiss-Prot
Match: ISPH_PROM4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9211) GN=ispH PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.655e-37 Identity = 71/138 (51.45%), Postives = 98/138 (71.01%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV 671 D + F+ +L SD YNRRGF + + + + Y S++I +++NG+ + G ++VKLAE++GFCWGVERAV +AYE R+ +P+E IWITNEIIHNP+VN L M V+ I E+G K F V +GDVV+LPAFGA V Sbjct: 2 DTQAFKRSLHHSDRYNRRGFESPTKRAQALEKAYQSNLIGSIRDNGYLFEHGRLRVKLAEAFGFCWGVERAVAMAYETRRHYPKESIWITNEIIHNPSVNDHLRNMNVRFISAEKGIKNFSSVQEGDVVILPAFGATV 139
BLAST of FC930285 vs. ExPASy Swiss-Prot
Match: ISPH_PROMA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus GN=ispH PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.290e-37 Identity = 71/138 (51.45%), Postives = 96/138 (69.57%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV 671 D + F+ +L SD YNRRGF + + + + Y S++I +++NG+ G ++VKLAE++GFCWGVERAV +AYE R+ +P E IWITNEIIHNP+VN L M V+ I E+G K F V +GDVV+LPAFGA V Sbjct: 2 DTQAFKRSLHHSDRYNRRGFESPAKRAQALEKAYQSNLIASIRDNGYLLEHGRLRVKLAEAFGFCWGVERAVAMAYETRRHYPTESIWITNEIIHNPSVNDHLRNMNVRFISAEKGIKDFSSVEEGDVVILPAFGATV 139 The following BLAST results are available for this feature:
BLAST of FC930285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930285 ID=FC930285; Name=FC930285; organism=Citrus clementina; type=EST; length=672bpback to top |