FC930285
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930285 vs. ExPASy Swiss-Prot
Match: ISPH_PROM5 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9515) GN=ispH PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.830e-36 Identity = 68/138 (49.28%), Postives = 94/138 (68.12%), Query Frame = 3 Query: 258 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV 671 D + +H++ S YNR+GF + + + + Y SD+I ++EN F + G +K+KLA+S+GFCWGVERAV +AYE R+ +P E IW+TNEIIHNP+VN L M V+ I + G K F V+ GDVV+LPAFGA V Sbjct: 2 DTQAIKHSVQHSGRYNRKGFESPTQRAKALGESYQSDLIASIRENNFSFEKGRLKIKLAKSFGFCWGVERAVAMAYETRRHYPNEDIWMTNEIIHNPSVNNHLSRMNVKIISAKNGIKDFSSVSTGDVVILPAFGATV 139
BLAST of FC930285 vs. ExPASy Swiss-Prot
Match: ISPH_SYNY3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=ispH PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.572e-32 Identity = 63/110 (57.27%), Postives = 85/110 (77.27%), Query Frame = 3 Query: 342 LMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV 671 +MN EY S +I+++++N + G+V + LAE++GFCWGVERAV +AYE R+ FP +++WITNEIIHNP+VN+RL EM V I V G+K F V KGDVV+LPAFGA+V Sbjct: 3 VMNTEYQSHLIQEIRQNNYRLERGDVTILLAEAFGFCWGVERAVAMAYETRQHFPGDRLWITNEIIHNPSVNQRLREMEVNFIDVVNGEKDFSGVAKGDVVILPAFGASV 112
BLAST of FC930285 vs. ExPASy Swiss-Prot
Match: ISPH_GLOVI (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Gloeobacter violaceus GN=ispH PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.234e-29 Identity = 60/131 (45.80%), Postives = 88/131 (67.18%), Query Frame = 3 Query: 288 RSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEG----KKQFDVVNKGDVVVLPAFGAA 668 +S NY R+GFG K E + + EY S +I +++ NG+ G V V+LAE++GFCWGV++AV +AYE + F ++WITNEIIHNP VN+ L M ++ + +E K F+ V++ DVV+LPAFGA+ Sbjct: 2 QSKNYFRKGFGLKAEVQDDLKAEYESSLIHEIRANGYTLRRGGVTVRLAEAFGFCWGVDKAVSMAYETHRMFAGRQLWITNEIIHNPLVNQHLRAMGIRFLDEDESGRRVPKDFERVSEKDVVILPAFGAS 132 The following BLAST results are available for this feature:
BLAST of FC930285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930285 ID=FC930285; Name=FC930285; organism=Citrus clementina; type=EST; length=672bpback to top |