FC930307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: SRPG_SYNE7 (Cysteine synthase, plasmid OS=Synechococcus elongatus (strain PCC 7942) GN=srpG PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.028e-41 Identity = 91/146 (62.33%), Postives = 111/146 (76.03%), Query Frame = 2 Query: 275 DVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAY-MLQQFDNPA 709 D +Q IGKTP+V LN IVKG A + AK+E P SVK RIG +MI DAEQ+GL+ PGK L+EPTSGNTGI LAF+AA++G L LTMP +MSLERR LL A+GA+LVLT+ KGM GAV++AE+I S P+ Y +LQQF NPA Sbjct: 10 DNSQTIGKTPLVRLNRIVKGAPATVLAKIEGRNPAYSVKCRIGAAMIWDAEQRGLLGPGKE-LIEPTSGNTGIALAFVAAARGIPLTLTMPETMSLERRKLLAAYGAKLVLTEGVKGMTGAVRRAEDIAASDPDRYVLLQQFRNPA 154
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSK_ECOLI (Cysteine synthase A OS=Escherichia coli (strain K12) GN=cysK PE=1 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 1.514e-39 Identity = 92/149 (61.74%), Postives = 110/149 (73.83%), Query Frame = 2 Query: 266 IAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAY-MLQQFDNPA 709 I ED + IG TP+V LN I G I AK+E P SVK RIG +MI DAE++G++ PG LVEPTSGNTGI LA++AA++GYKL LTMP +MS+ERR LLKA GA LVLT+ AKGMKGA+QKAEEI+ S P Y +LQQF NPA Sbjct: 4 IFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVE-LVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPA 148
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSK_ECO57 (Cysteine synthase A OS=Escherichia coli O157:H7 GN=cysK PE=3 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 1.514e-39 Identity = 92/149 (61.74%), Postives = 110/149 (73.83%), Query Frame = 2 Query: 266 IAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAY-MLQQFDNPA 709 I ED + IG TP+V LN I G I AK+E P SVK RIG +MI DAE++G++ PG LVEPTSGNTGI LA++AA++GYKL LTMP +MS+ERR LLKA GA LVLT+ AKGMKGA+QKAEEI+ S P Y +LQQF NPA Sbjct: 4 IFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVE-LVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPA 148
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSK_SALTY (Cysteine synthase A OS=Salmonella typhimurium GN=cysK PE=1 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 92/149 (61.74%), Postives = 110/149 (73.83%), Query Frame = 2 Query: 266 IAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAY-MLQQFDNPA 709 I ED + IG TP+V LN I G I AK+E P SVK RIG +MI DAE++G++ PG LVEPTSGNTGI LA++AA++GYKL LTMP +MS+ERR LLKA GA LVLT+ AKGMKGA+QKAEEI+ S P Y +LQQF NPA Sbjct: 4 IYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVE-LVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPA 148
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSK_SALTI (Cysteine synthase A OS=Salmonella typhi GN=cysK PE=3 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 92/149 (61.74%), Postives = 110/149 (73.83%), Query Frame = 2 Query: 266 IAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAY-MLQQFDNPA 709 I ED + IG TP+V LN I G I AK+E P SVK RIG +MI DAE++G++ PG LVEPTSGNTGI LA++AA++GYKL LTMP +MS+ERR LLKA GA LVLT+ AKGMKGA+QKAEEI+ S P Y +LQQF NPA Sbjct: 4 IYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVE-LVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPA 148
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSK_NEIMB (Cysteine synthase OS=Neisseria meningitidis serogroup B GN=cysK PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.385e-37 Identity = 79/151 (52.32%), Postives = 110/151 (72.85%), Query Frame = 2 Query: 260 LNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAY-MLQQFDNPA 709 + IA +T+LIG TP+V LN + +G A +A KLE P SVKDRI +MI AE+ G I +++VE TSGNTG+GLA + A++GYKL +TMP SMS ER++LL+AFGAEL+LT +A+GM GA+ KA+ ++++ P+ Y M +QFDN A Sbjct: 1 MKIANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVKDRIAEAMIEGAEKAGKINKN-TVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKERKMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTYFMPRQFDNEA 150
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSK_STRP6 (Cysteine synthase OS=Streptococcus pyogenes serotype M6 GN=cysK PE=1 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 1.567e-36 Identity = 77/148 (52.03%), Postives = 109/148 (73.65%), Query Frame = 2 Query: 266 IAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 709 I + +T+L+G+TP++ LN ++ A++ KLE P SVKDRI SMI AE +GLI+PG +++EPTSGNTGIGLA++ A+KGY++I+ MP +MSLERR +++A+GAELVLT A+GMKGA+ K E + A+M QF+NPA Sbjct: 4 IYKTITELVGQTPIIKLNRLIPNEAADVYVKLEAFNPGSSVKDRIALSMIEAAEAEGLISPG-DVIIEPTSGNTGIGLAWVGAAKGYRVIIVMPETMSLERRQIIQAYGAELVLTPGAEGMKGAIAKTETLAIEL-GAWMPMQFNNPA 149
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSK_BACSU (Cysteine synthase OS=Bacillus subtilis GN=cysK PE=1 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 2.673e-36 Identity = 82/150 (54.67%), Postives = 109/150 (72.67%), Query Frame = 2 Query: 260 LNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 709 + +A +T+LIG TP+V LN + A++ KLE M P SVKDRIG +MI AE++G + G +I +EPTSGNTGIGLA +AA+KG K IL MP +MS+ERR LL+A+GAELVLT A+GMKGA++KAEE L ++ QQF+NP+ Sbjct: 2 VRVANSITELIGNTPIVKLNRLADENSADVYLKLEYMNPGSSVKDRIGLAMIEAAEKEGKLKAGNTI-IEPTSGNTGIGLAMVAAAKGLKAILVMPDTMSMERRNLLRAYGAELVLTPGAEGMKGAIKKAEE-LAEKHGYFVPQQFNNPS 149
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSK_STAES (Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=cysK PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.954e-36 Identity = 83/144 (57.64%), Postives = 103/144 (71.53%), Query Frame = 2 Query: 278 VTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 709 VTQ+IG TP+V L +V A+I KLE P SVKDRI +MI AE++G I PG +I VEPTSGNTGIGLAF+ A+KGYK + TMP +MS ERR LLKA+GAELVLT ++ MKGA++KA+E L + QQF+NPA Sbjct: 9 VTQIIGNTPVVKLRNVVDDDAADIYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKE-LKEEHGYFEPQQFENPA 150
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSK_STAEQ (Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=cysK PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.954e-36 Identity = 83/144 (57.64%), Postives = 103/144 (71.53%), Query Frame = 2 Query: 278 VTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 709 VTQ+IG TP+V L +V A+I KLE P SVKDRI +MI AE++G I PG +I VEPTSGNTGIGLAF+ A+KGYK + TMP +MS ERR LLKA+GAELVLT ++ MKGA++KA+E L + QQF+NPA Sbjct: 9 VTQIIGNTPVVKLRNVVDDDAADIYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKE-LKEEHGYFEPQQFENPA 150 The following BLAST results are available for this feature:
BLAST of FC930307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930307 ID=FC930307; Name=FC930307; organism=Citrus clementina; type=EST; length=710bpback to top |