FC930307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSK_BUCAI (Cysteine synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=cysK PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.589e-31 Identity = 76/149 (51.01%), Postives = 101/149 (67.79%), Query Frame = 2 Query: 266 IAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAY-MLQQFDNPA 709 I +D + IG TP+V LN I G NI K+E P SVK RIG +MI AE+ I L+E TSGNTGI LA++AAS+ Y+L LTMP +MS+ER+ +LK+ GAEL+LTD GMKGA+ KA +I++ P+ Y +L+QF+NPA Sbjct: 4 IYQDNSLTIGNTPLVRLNRIGNG---NILVKIESRNPSFSVKCRIGANMIWHAEKNNNINKNVK-LIEATSGNTGIALAYVAASRNYRLTLTMPETMSIERKKILKSLGAELILTDGRYGMKGAISKANDIISRNPSKYFLLKQFENPA 148
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSM_CAMJE (Cysteine synthase B OS=Campylobacter jejuni GN=cysM PE=3 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.855e-29 Identity = 74/148 (50.00%), Postives = 93/148 (62.84%), Query Frame = 2 Query: 260 LNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAYMLQQFDN 703 + + E V++LIG TP+++L K N+ AK E + P S+KDR F MI DA I +I VE TSGNTGI LA I A G K I MP SMSLERR ++ FGA L LT + GMKGAV KA EIL +TPN++M+ QF+N Sbjct: 1 MKVHEKVSELIGNTPIIHL----KKFGINVFAKCEFLNPSHSIKDRAAFEMIKDALDSKKINQDTTI-VEATSGNTGISLAMICADLGLKFIAVMPESMSLERRKMITLFGARLELTPANLGMKGAVDKANEILLNTPNSFMVSQFEN 143
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSM_ECOLI (Cysteine synthase B OS=Escherichia coli (strain K12) GN=cysM PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.295e-26 Identity = 68/141 (48.23%), Postives = 89/141 (63.12%), Query Frame = 2 Query: 284 QLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAYMLQQFDNP 706 Q IG TP+V L + + + KLE P SVKDR SMI +AE++G I PG +L+E TSGNTGI LA IAA KGY++ L MP +MS ERR ++A+GAEL+L +GM+GA A E+ N +L QF+NP Sbjct: 6 QTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG-DVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMAN-RGEGKLLDQFNNP 144
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CBS_YEAST (Cystathionine beta-synthase OS=Saccharomyces cerevisiae GN=CYS4 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26 Identity = 65/148 (43.92%), Postives = 92/148 (62.16%), Query Frame = 2 Query: 275 DVTQLIGKTPMVYLNTIVK--GCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGM---KGAVQKAEEILNSTPNAYMLQQFDN 703 +V L+G TP++ L + K G I AKLE+ P S+KDRI SM+ +AE G I P +S L+EPTSGNTGIGLA I A KGY+ I+T+P MS E+ +LKA GAE++ T +A + + A+++ P A +L Q++N Sbjct: 13 NVIDLVGNTPLIALKKLPKALGIKPQIYAKLELYNPGGSIKDRIAKSMVEEAEASGRIHPSRSTLIEPTSGNTGIGLALIGAIKGYRTIITLPEKMSNEKVSVLKALGAEIIRTPTAAAWDSPESHIGVAKKLEKEIPGAVILDQYNN 160
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CBS_DICDI (Cystathionine beta-synthase OS=Dictyostelium discoideum GN=cysB PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.625e-25 Identity = 64/151 (42.38%), Postives = 93/151 (61.59%), Query Frame = 2 Query: 266 IAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGM---KGAVQKAEEILNSTPNAYMLQQFDNPA 709 I +++ IG TP+V +N + + AK E SVKDRIG MI DAE+ G I G + L+EPTSGNTGIGLA AA KGYK+I+T+P MS E+ +LKA GAE++ T + + + A+++ + PN+++L Q+ NP+ Sbjct: 32 IMDNILDNIGGTPLVRVNKVSSDLECELVAKCEFFNAGGSVKDRIGHRMIVDAEESGRIKKGDT-LIEPTSGNTGIGLALTAAIKGYKMIITLPEKMSQEKVDVLKALGAEIIRTPTEAAFDAPESHIGVAKKLNSEIPNSHILDQYGNPS 181
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSM_SALTY (Cysteine synthase B OS=Salmonella typhimurium GN=cysM PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.621e-25 Identity = 67/141 (47.52%), Postives = 88/141 (62.41%), Query Frame = 2 Query: 284 QLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAYMLQQFDNP 706 Q IG TP+V L + + I KLE P SVKDR SMI +AE++G I PG +L+E TSGNTGI LA IAA KGY++ L MP +MS ERR ++A+GAEL+L +GM+GA A ++ +L QF+NP Sbjct: 6 QTIGNTPLVKLQRLGPDNGSEIWVKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG-DVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLA-LAMSERGEGKLLDQFNNP 144
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CBS_RAT (Cystathionine beta-synthase OS=Rattus norvegicus GN=Cbs PE=1 SV=3) HSP 1 Score: 113.62 bits (283), Expect = 1.053e-24 Identity = 70/154 (45.45%), Postives = 91/154 (59.09%), Query Frame = 2 Query: 266 IAEDVTQLIGKTPMVYLNTIVK--GCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLT------DSAKGMKGAVQKAEEILNSTPNAYMLQQFDN 703 I D+ + IG TPMV +N I K G + AK E SVKDRI MI DAE+ G + PG +I +EPTSGNTGIGLA AA KGY+ I+ MP MS+E+ +L+A GAE+V T DS + G A + N PN+++L Q+ N Sbjct: 73 ILPDILRKIGNTPMVRINRISKNAGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGTLKPGDTI-IEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTNARFDSPESHVGV---AWRLKNEIPNSHILDQYRN 222
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CBS_RABIT (Cystathionine beta-synthase OS=Oryctolagus cuniculus GN=CBS PE=2 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 1.376e-24 Identity = 70/154 (45.45%), Postives = 91/154 (59.09%), Query Frame = 2 Query: 266 IAEDVTQLIGKTPMVYLNTIVK--GCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLT------DSAKGMKGAVQKAEEILNSTPNAYMLQQFDN 703 I D+ Q IG TPMV +N I K G + AK E SVKDRI MI DAE+ G + PG +I +EPTSGNTGIGLA AA KGY+ I+ MP MSLE+ +L+A GAE+V T DS + G + ++ PN+++L Q+ N Sbjct: 76 ILPDILQKIGDTPMVRINKIGKNFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGTLRPGDTI-IEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSLEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKQ---EIPNSHILDQYRN 225
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CBS_MOUSE (Cystathionine beta-synthase OS=Mus musculus GN=Cbs PE=2 SV=3) HSP 1 Score: 112.849 bits (281), Expect = 1.797e-24 Identity = 70/154 (45.45%), Postives = 91/154 (59.09%), Query Frame = 2 Query: 266 IAEDVTQLIGKTPMVYLNTIVK--GCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLT------DSAKGMKGAVQKAEEILNSTPNAYMLQQFDN 703 I D+ + IG TPMV +N I K G + AK E SVKDRI MI DAE+ G + PG +I +EPTSGNTGIGLA AA KGY+ I+ MP MS+E+ +L+A GAE+V T DS + G A + N PN+++L Q+ N Sbjct: 73 ILPDILRKIGNTPMVRINKISKNAGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGNLKPGDTI-IEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTNARFDSPESHVGV---AWRLKNEIPNSHILDQYRN 222
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSM_AQUAE (Cysteine synthase OS=Aquifex aeolicus GN=cysM PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24 Identity = 67/154 (43.51%), Postives = 94/154 (61.04%), Query Frame = 2 Query: 272 EDVTQLIGKTPMVYLNTIVKGCV-------ANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAYM-LQQFDNPA 709 E + +L+G TP+V VK C+ I AKLE P SVKDR SM DA ++GLI GK ++++ TSGNTGI LA + A+ G + L MPA++S ER+ ++KAFGA+L LTD +G GA+ E++ P Y+ L Q++NPA Sbjct: 23 ETILKLVGNTPLVR----VKKCLPEDIPEDVEIWAKLESFNPGGSVKDRPALSMFLDALKRGLIKEGK-VVIDATSGNTGIALAMVGAALGVPVELAMPANVSEERKKIIKAFGAKLYLTDPLEGTDGAILFVRELVQKYPEKYVYLDQYNNPA 171 The following BLAST results are available for this feature:
BLAST of FC930307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930307 ID=FC930307; Name=FC930307; organism=Citrus clementina; type=EST; length=710bpback to top |