FC930307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: MCCA_BACSU (O-acetylserine dependent cystathionine beta-synthase OS=Bacillus subtilis GN=mccA PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.918e-24 Identity = 58/148 (39.19%), Postives = 88/148 (59.46%), Query Frame = 2 Query: 260 LNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAYMLQQFDN 703 + + D+T+LIG TP++ L + AKLE+M P S+KDR+G +I DA G + PG +++E T+GNTGIGLA A G K I +P S E++ +++A GA ++ T GM+GA+QKA ++ N+Y + QF N Sbjct: 1 MTVITDITELIGNTPLLRLKNFDVPEGVAVYAKLEMMNPGGSIKDRLGDMLIRDALDSGKVKPG-GVIIEATAGNTGIGLALSARKYGLKAIFCVPEHFSREKQQIMQALGASIIHTPRQDGMQGAIQKAIQLETEIENSYCVLQFKN 147
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSM_MYCTU (Cysteine synthase B OS=Mycobacterium tuberculosis GN=cysM PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.165e-23 Identity = 65/153 (42.48%), Postives = 89/153 (58.17%), Query Frame = 2 Query: 272 EDVTQLIGKTPMVYLNTIVK-------GCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 709 + + Q +G TP+V L + G + AKLE P S+KDR MI AE GL+ PG +IL EPTSGNTGI LA A KGY+LI MP + S+ERR LL+ +GA+++ + + G AV A+E+ + P+ ML Q+ NPA Sbjct: 5 DSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPA 156
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSM_MYCBO (Cysteine synthase B OS=Mycobacterium bovis GN=cysM PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.165e-23 Identity = 65/153 (42.48%), Postives = 89/153 (58.17%), Query Frame = 2 Query: 272 EDVTQLIGKTPMVYLNTIVK-------GCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 709 + + Q +G TP+V L + G + AKLE P S+KDR MI AE GL+ PG +IL EPTSGNTGI LA A KGY+LI MP + S+ERR LL+ +GA+++ + + G AV A+E+ + P+ ML Q+ NPA Sbjct: 5 DSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPA 156
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CBS_HUMAN (Cystathionine beta-synthase OS=Homo sapiens GN=CBS PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.165e-23 Identity = 69/154 (44.81%), Postives = 90/154 (58.44%), Query Frame = 2 Query: 266 IAEDVTQLIGKTPMVYLNTIVK--GCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLT------DSAKGMKGAVQKAEEILNSTPNAYMLQQFDN 703 I D+ + IG TPMV +N I K G + AK E SVKDRI MI DAE+ G + PG +I +EPTSGNTGIGLA AA +GY+ I+ MP MS E+ +L+A GAE+V T DS + G A + N PN+++L Q+ N Sbjct: 76 ILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGV---AWRLKNEIPNSHILDQYRN 225
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CBS_MACFA (Cystathionine beta-synthase OS=Macaca fascicularis GN=CBS PE=2 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 1.521e-23 Identity = 68/154 (44.16%), Postives = 90/154 (58.44%), Query Frame = 2 Query: 266 IAEDVTQLIGKTPMVYLNTIVK--GCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLT------DSAKGMKGAVQKAEEILNSTPNAYMLQQFDN 703 I D+ + IG TPM+ +N I K G + AK E SVKDRI MI DAE+ G + PG +I +EPTSGNTGIGLA AA +GY+ I+ MP MS E+ +L+A GAE+V T DS + G A + N PN+++L Q+ N Sbjct: 76 ILPDILKKIGDTPMIRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGTLKPGDTI-IEPTSGNTGIGLALTAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGV---AWRLKNEIPNSHILDQYRN 225
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSM_PSEAE (Cysteine synthase B OS=Pseudomonas aeruginosa GN=cysM PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.391e-22 Identity = 64/146 (43.84%), Postives = 84/146 (57.53%), Query Frame = 2 Query: 278 VTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAYMLQQF---DNP 706 + +G TP+V L + + KLE P SVKDR SMI AE +G I PG + L+E TSGNTGI LA AA KGYK+IL MP + + ER+ + A+GAEL+L +GM+GA A++ L +L QF DNP Sbjct: 8 IADCVGNTPLVRLQRLPGETSNTLLVKLEGNNPAGSVKDRPALSMITRAELRGDIRPGDT-LIEATSGNTGIALAMAAAIKGYKMILIMPDNSTAERKAAMTAYGAELILVSKEEGMEGARDLADK-LQREGRGKVLDQFANGDNP 151
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSM_PSESY (Cysteine synthase B (Fragment) OS=Pseudomonas syringae pv. syringae GN=cysM PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.424e-21 Identity = 63/148 (42.57%), Postives = 83/148 (56.08%), Query Frame = 2 Query: 272 EDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAYMLQQF---DNP 706 + + +G TP+V L + + KLE P SVKDR SMI AE +G I PG + L+E TSGNTGI LA AA KGY++IL MP + S ER+ + A+GAEL+ GM+GA AE + + +L QF DNP Sbjct: 6 QTIADCVGNTPLVRLQRMAGNTSNTLLLKLEGNNPAGSVKDRPALSMITRAELRGQIHPGDT-LIEATSGNTGIALAMAAAIKGYRMILIMPDNSSAERKAAMTAYGAELISVSKDDGMEGARDLAER-MQAEGRGKVLDQFANGDNP 151
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSK_EMENI (Cysteine synthase OS=Emericella nidulans GN=cysB PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 9.228e-21 Identity = 60/146 (41.10%), Postives = 84/146 (57.53%), Query Frame = 2 Query: 278 VTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAEL--VLTDSAKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 709 +T+ IG TP++ L + + +NI AK E P SVKDR ++ DAE++GL+ PG ++ VE T+GNTGIGLA + SKGYKL++ MP + S + LL+ GAE+ V + + KA S NA QFDN A Sbjct: 36 LTEAIGNTPLIRLKRLSEETGSNILAKAEFQNPGGSVKDRAALYVVKDAEERGLLKPGGTV-VEGTAGNTGIGLAHVCRSKGYKLVIYMPNTQSQGKIDLLRLLGAEVYPVPAVAFDNPENYNHKARRHAESLDNAVWTNQFDNTA 180
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSK1_SCHPO (Cysteine synthase 1 OS=Schizosaccharomyces pombe GN=cys11 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.685e-20 Identity = 65/158 (41.14%), Postives = 86/158 (54.43%), Query Frame = 2 Query: 242 QTGIEGLNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAEL--VLTDSAKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 709 QT + G I IG+TP++ LNT+ NI AK E P SVKDR + ++ DAE+KG ++ G +I VE T+GNTGIGLA IA ++GYK ++ MP + S + LK GAE+ V +A STPNA QFDN A Sbjct: 7 QTKVPG--IVSGFIGAIGRTPLIRLNTLSNETGCNILAKAEFQNPGGSVKDRAAYYVVRDAEKKGKLSRGGTI-VEGTAGNTGIGLAHIARARGYKCVIYMPNTQSQAKIDTLKFLGAEVHPVPVAPFSNPLNYNHQARRHAESTPNASWTDQFDNVA 161
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSM_HELPY (Cysteine synthase OS=Helicobacter pylori GN=cysM PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20 Identity = 54/141 (38.30%), Postives = 87/141 (61.70%), Query Frame = 2 Query: 290 IGKTPMVYLNTIVKGCVANIA--AKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAYMLQQFDNP 706 IG+TP+ N A AKLE + P SVKDR+G +I + + G IT K+ ++EPT+GNTGI LA +A K I +P S E++ +++A GA ++ T +++G+ GA++K++E+ S P++Y+ QF+NP Sbjct: 11 IGRTPVFKFTNKDYPIPLNSAIYAKLEHLNPGGSVKDRLGQYLIGEGFKTGKIT-SKTTIIEPTAGNTGIALALVAIKHHLKTIFVVPEKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFENP 150 The following BLAST results are available for this feature:
BLAST of FC930307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930307 ID=FC930307; Name=FC930307; organism=Citrus clementina; type=EST; length=710bpback to top |