FC930307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSM_HELPJ (Cysteine synthase OS=Helicobacter pylori J99 GN=cysM PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.638e-19 Identity = 49/120 (40.83%), Postives = 79/120 (65.83%), Query Frame = 2 Query: 347 IAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGAVQKAEEILNSTPNAYMLQQFDNP 706 I AKLE + P SVKDR+G +I +A + IT +I +EPT+GNTGI LA +A K I +P S E++ +++A GA ++ T +++G+ GA++K++E+ S P++Y+ QF+NP Sbjct: 31 IYAKLEHLNPGGSVKDRLGQYLIKEAFRTRKITSTTTI-IEPTAGNTGIALALVAIKHHLKTIFVVPKKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFENP 149
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSK_YEAST (Putative cysteine synthase OS=Saccharomyces cerevisiae GN=YGR012W PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.601e-15 Identity = 52/155 (33.55%), Postives = 83/155 (53.55%), Query Frame = 2 Query: 272 EDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGK-SILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAEL------VLTDSAKGMKGAVQKAEEILNSTP--NAYMLQQFDNPA 709 E V +LIG TP+V + ++ K NI AKLE+ P S KDR+ ++I AE+ G + G+ + E TSG+TGI +A + + GY+ +++P SLE+ LL++ GA + + D + + A + E+ S A QF+N A Sbjct: 47 EGVEELIGNTPLVKIRSLTKATGVNIYAKLELCNPAGSAKDRVALNIIKTAEELGELVRGEPGWVFEGTSGSTGISIAVVCNALGYRAHISLPDDTSLEKLALLESLGATVNKVKPASIVDPNQYVNAAKKACNELKKSGNGIRAVFADQFENEA 201
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSK_DICDI (Cysteine synthase OS=Dictyostelium discoideum GN=cysK PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 50/149 (33.56%), Postives = 79/149 (53.02%), Query Frame = 2 Query: 266 IAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGMKGA---VQKAEEILNSTPNAYMLQQFDN 703 I+ + + +G TP++ + ++ + I K E M P S KDR+ +I D E+KGL+ G S +VE T+G+TGI L + S+GY + L +P ++S E+ LL+ GAE + GM A + A + A+ QFDN Sbjct: 38 ISNGIIETVGNTPLIRIKSLSEATGCEIYGKAEFMNPGGSPKDRVAREIILDGEKKGLLKKG-STIVEATAGSTGISLTMLGKSRGYNVQLFIPDNVSKEKVDLLEMLGAETKIVPIV-GMNNANHFMHCAYQRCLGDDMAFYANQFDN 184
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: Y4XP_RHISN (Putative cysteine synthase OS=Rhizobium sp. (strain NGR234) GN=NGR_a00730 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13 Identity = 54/149 (36.24%), Postives = 82/149 (55.03%), Query Frame = 2 Query: 278 VTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAEL--VLTDSAKGMKGAVQK---AEEILNSTPNAYMLQQFDNPA 709 VTQLIG+TP++ ++ V G A + K+E P S+KDR+ SM+ A Q G + PG +I VE +SGNTG GLA A G + I + + ++ +++A GAE+ V D + V++ A ++ P A + Q DNPA Sbjct: 6 VTQLIGQTPVMSID--VPGRNATLVLKIEKNNPGGSMKDRMARSMVIAALQDGRLPPGGTI-VESSSGNTGTGLALAALEFGLRFIAVVDHHAAPDKIRMMRALGAEIRYVEGDFREDEVAVVERQRLAAQLGAQLPGALFMNQSDNPA 151
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSK2_SCHPO (Cysteine synthase 2 OS=Schizosaccharomyces pombe GN=cys12 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 53/159 (33.33%), Postives = 79/159 (49.69%), Query Frame = 2 Query: 263 NIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILV-EPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAEL------VLTDSAKGMKGAVQKA--EEILNSTP-NAYMLQQFDNPA 709 +I V LIG T MV + ++ + +I AK E + P S KDR+ MI AE+ G + P +S V E T+G+TGI +A + S GY + MP+ S E+ +L+ GA + + D + A + A + S P Y QF+NPA Sbjct: 41 DIVNGVEGLIGNTKMVRIKSLSQATGCDILAKAEFLNPGNSPKDRVALQMIRTAEENGDLVPYQSNAVYEGTAGSTGISIAMLCCSLGYDSRIYMPSDQSKEKSDILELLGAHVQRVTPAPIVDPNHFVNTARRNAANHTVDESIPGKGYFANQFENPA 199
BLAST of FC930307 vs. ExPASy Swiss-Prot
Match: CYSM_RALME (Cysteine synthase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=cysM PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.076e-11 Identity = 43/151 (28.48%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 266 IAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGA---ELVLTDSAKG-MKGAVQKAEEILNSTPNAYMLQQFDNP 706 + + + IG TP+V L + A + AKLE++ P SVKDR ++ +G I P S ++E +SGN I LA I KG + + +S +L+ +GA ++ DS G ++ +++ ++L +A + Q+ NP Sbjct: 2 VCNSIIESIGNTPLVQLRRLFGRADAEVFAKLELLNPAGSVKDRPARYIVEKGLTEGAIGP-HSHVIESSSGNLAIALAMICGLKGLRFTAVVDPKISPTNLKILRCYGAGIEQVTAKDSQGGYLETRIERVRQMLREQRDAIWINQYANP 151 The following BLAST results are available for this feature:
BLAST of FC930307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930307 ID=FC930307; Name=FC930307; organism=Citrus clementina; type=EST; length=710bpback to top |