FC930322
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_CYAME (Elongation factor Tu, chloroplastic OS=Cyanidioschyzon merolae GN=tufA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.782e-21 Identity = 64/190 (33.68%), Postives = 95/190 (50.00%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 665 + K H+NI IGHVD GK+T T + L D V +++FE+ +D ER RGITI+ + +++T K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + EV L K + + +PFV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAISAVLASKDNTVQLKKFEE---------------IDSAPEERARGITINTSHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPSIVVFLNKADMVD---DPELLELVELEVRELLSKYDFPGDTIPFV 172
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU2_STRRA (Elongation factor Tu-2 OS=Streptomyces ramocissimus GN=tuf2 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.782e-21 Identity = 71/206 (34.47%), Postives = 102/206 (49.51%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERS 707 + K H+NI IGH+D GK+T T I K + +RF + F +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + + EV L + + + VP V +S EGD RS Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTA-------AITKVLHDRFP------DLNPFTPFDQIDKAPEERQRGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKTDMVD---DEEILELVELEVRELLTEYEFPGDDVPVVKVSALRALEGDPRWTRS 190
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS9 (Elongation factor Tu OS=Synechococcus sp. (strain CC9902) GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFE 683 + K H+NI IGHVD GK+T T + L + ++ + +D ERERGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L+ +T G QT+EH LLA +GV ++ NK D + + + E+ L + + +P + +SG + Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITNVLAKKGQAQVQNYAD---------------IDGAPEERERGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEIIELVEMEIRELLSSYDFPGDDIPVIQVSGLK 177
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_RICBR (Elongation factor Tu OS=Rickettsia bellii (strain RML369-C) GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 61/190 (32.11%), Postives = 98/190 (51.58%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 665 + K H+NI IGHVD GK++ T + LG +K + ++++++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV +M+ NK+D + + EV L K + +++P + Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITMVLGKDNKDIKVKKYDE---------------IDAAPEEKERGITISTAHVEYETKSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPKMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYDFPGDEIPII 172
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_RICB8 (Elongation factor Tu OS=Rickettsia bellii (strain OSU 85-389) GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 61/190 (32.11%), Postives = 98/190 (51.58%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 665 + K H+NI IGHVD GK++ T + LG +K + ++++++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV +M+ NK+D + + EV L K + +++P + Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITMVLGKDNKDIKVKKYDE---------------IDAAPEEKERGITISTAHVEYETKSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPKMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYDFPGDEIPII 172
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_PROMP (Elongation factor Tu OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 66/204 (32.35%), Postives = 101/204 (49.51%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIE 701 + K H+NI IGHVD GK+T T I + ++ + +A + +D ERERGITI+ A ++ET + + +D PGH D++KNMITG +Q D A+L+ +T G QT+EH LLA +GV ++ NK D + + + E+ L + + +P V +SG EGD+ E Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTA-------AITNVLAKKGQAQAQDYGD--------IDGAPEERERGITINTAHVEYETAERHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEIIELVEMEIRELLDSYDFPGDDIPIVQVSGLKALEGDSTWE 186
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_LACSS (Elongation factor Tu OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 67/189 (35.45%), Postives = 94/189 (49.74%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 665 + K H+NI IGHVD GK+T T I K + ++ EA + +D ERERGITI+ A ++ET + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV +I NK D D + EV L + + + +P + Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTA-------AITKMLADKGLAEAQDYAN--------IDAAPEERERGITINTAHVEYETENRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLAHQVGVDYIIVFLNKTDLVD---DDELTDLVEMEVRELLSEYDFPGDDIPVI 172
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_LACJO (Elongation factor Tu OS=Lactobacillus johnsonii GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 68/200 (34.00%), Postives = 97/200 (48.50%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD 689 + K H+NI IGHVD GK+T T + L E + + +D E+ERGITI+ A ++ET + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV+ ++ NK+D D + EV L + Y + VP + + EGD Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTAAITTVLAEDGLAQAEDYSQ---------------IDAAPEEKERGITINTAHVEYETKNRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVQYIVVFLNKVDLVD---DPELIDLVEMEVRDLLSEYDYPGDDVPVIRGSALKALEGD 183
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_LACGA (Elongation factor Tu OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=tuf PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 68/200 (34.00%), Postives = 97/200 (48.50%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD 689 + K H+NI IGHVD GK+T T + L E + + +D E+ERGITI+ A ++ET + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GVK ++ NK+D D + EV L + Y + VP + + +GD Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTAAITTVLAEDGLAQAEDYSQ---------------IDAAPEEKERGITINTAHVEYETKNRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVKYIVVFLNKVDLVD---DPELIDLVEMEVRDLLTEYDYPGDDVPVIRGSALKALQGD 183
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_GEOSL (Elongation factor Tu OS=Geobacter sulfurreducens GN=tuf1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 64/198 (32.32%), Postives = 95/198 (47.98%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDN 692 + K H+NI IGHVD GK+T T + K AE + F+ +D ERERGITI + ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + E+ L + + +P + S +G N Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAIT---------------KVLAERGQAEFRGFDQIDNAPEERERGITIATSHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKADMVD---DEELLELVELEIRELLSSYDFPGDDIPIIKGSALKGLN 180 The following BLAST results are available for this feature:
BLAST of FC930322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930322 ID=FC930322; Name=FC930322; organism=Citrus clementina; type=EST; length=741bpback to top |