FC930322
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_BORGA (Elongation factor Tu OS=Borrelia garinii GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 58/178 (32.58%), Postives = 95/178 (53.37%), Query Frame = 3 Query: 90 IMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSY 623 + + K H+N+ IGHVD GK+T T + ++K + ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + E+++ V Y Sbjct: 5 VFQRTKPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPELVELVEVEVLELVEKY 161
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_BORBZ (Elongation factor Tu OS=Borrelia burgdorferi (strain ZS7) GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 58/178 (32.58%), Postives = 95/178 (53.37%), Query Frame = 3 Query: 90 IMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSY 623 + + K H+N+ IGHVD GK+T T + ++K + ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + E+++ V Y Sbjct: 5 VFQRTKPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPELVELVEVEVLELVEKY 161
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_BORBU (Elongation factor Tu OS=Borrelia burgdorferi GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 58/178 (32.58%), Postives = 95/178 (53.37%), Query Frame = 3 Query: 90 IMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSY 623 + + K H+N+ IGHVD GK+T T + ++K + ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + E+++ V Y Sbjct: 5 VFQRTKPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPELVELVEVEVLELVEKY 161
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_BORAP (Elongation factor Tu OS=Borrelia afzelii (strain PKo) GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 58/178 (32.58%), Postives = 95/178 (53.37%), Query Frame = 3 Query: 90 IMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSY 623 + + K H+N+ IGHVD GK+T T + ++K + ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + E+++ V Y Sbjct: 5 VFQRTKPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPELVELVEVEVLELVEKY 161
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_THEAB (Elongation factor Tu OS=Thermosipho africanus (strain TCF52B) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21 Identity = 65/189 (34.39%), Postives = 93/189 (49.21%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 665 + K H+N+ IGH+D GK+T T + L + +E+ +DK E+ERGITI+I+ ++ET + ID PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA + V MI NK D + D + EV L K + + +P V Sbjct: 8 RSKPHLNVGTIGHIDHGKTTLTAAITKYLSFFGRADYTPYEQ---------------IDKAPEEKERGITINISHIEYETETRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVNVPAMIVFINKTDMVD---DEELIDLVEMEVRELLNKYEFPGDDLPVV 171
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_TAXOC (Elongation factor Tu OS=Taxeobacter ocellatus GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21 Identity = 67/197 (34.01%), Postives = 96/197 (48.73%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGD 689 + K H+NI IGHVD GK+T T + L K A KR F +D E+ERGITI+ A ++ T + +D PGH D++KNM+TG +Q D A+L++ +T G QTREH LLA +GV Q++ NK+D + ++E+ S+ G N V + G GD Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAN----------KGLAA--KRDFSS---IDNAPEEKERGITINTAHVEYSTANRHYAHVDCPGHADYVKNMVTGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVPQLVVFMNKVDMVDDPELLELVEMEIRELLSFYDFDGDNIPVVQGSALGGLNGD 182
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_SULNB (Elongation factor Tu OS=Sulfurovum sp. (strain NBC37-1) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21 Identity = 65/208 (31.25%), Postives = 97/208 (46.63%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDW 722 + K HINI IGHVD GK+T T + L + ++ +D ERERGITI + ++ET + +D PGH D++KNMITG +Q D A+L+I +T G QTREH LL+ +GV ++ NK D + + + + EV L + + + P V S F+ + T +W Sbjct: 8 RTKPHINIGTIGHVDHGKTTLTAAITAVLAVAGDTELMDYD---------------AIDNAPEERERGITIATSHVEYETATRHYAHVDCPGHADYVKNMITGAAQMDGAILVIAATDGPM-------AQTREHILLSKQVGVPYIVVFLNKEDQLDDEDKEEMLELVEMEVRELLSEYDFPGDDTPIVAGSAFQALEEAKTGTLGEW 193
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_RECAM (Elongation factor Tu, mitochondrial OS=Reclinomonas americana GN=TUFA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21 Identity = 62/189 (32.80%), Postives = 92/189 (48.68%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 665 + K H NI IGHVD GK+T T + L V +++ +DK E++RGITI + ++ETTK + ID PGH D++KNMITG +Q D A+L++ + G QTREH LL+ +GV ++ NK+D D + EV L Y +++P + Sbjct: 8 RTKPHCNIGTIGHVDHGKTTLTAAITKVLSETGGAVFTDYDQ---------------IDKAPEEKKRGITISTSHVEYETTKRHYAHIDCPGHEDYVKNMITGAAQMDGAILVVSAVDGPMP-------QTREHILLSRQVGVPSLVVFLNKVDMVN---DPEMLDLVEMEVRELLLSYKYPGDEIPII 171
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_KOSOT (Elongation factor Tu OS=Kosmotoga olearia (strain TBF 19.5.1) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21 Identity = 67/201 (33.33%), Postives = 97/201 (48.26%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDN 692 + K H+NI IGH+D GK+T T + K A F +DK E+ RGITI++ ++ET K + ID PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA + V M+ NK+D + + + +EV L K + ++VP + + E DN Sbjct: 8 RTKPHLNIGTIGHIDHGKTTLTAAIT---------------KALAYKGFADFTPFDAIDKAPEEKARGITINVTHVEYETEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGVMP-------QTREHVLLARQVNVPAMVVFINKVDMVD---DEELVELVEEEVRDLLSKYEFPGDEVPVIKGSALMALEADN 183
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_CHLPD (Elongation factor Tu OS=Chlorobium phaeobacteroides (strain DSM 266) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21 Identity = 68/206 (33.01%), Postives = 101/206 (49.03%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERS 707 ++K H+NI IGHVD GK+T T + L + +R F +DK ERERGITI A +++T K + ID PGH D+IKNMITG +Q D A+L++ T G QTREH LLA + V ++ NK+D P+ + + E+ L + + + +P + + +GD E+S Sbjct: 8 RDKPHVNIGTIGHVDHGKTTLTAAITSVLA------------KQGLAQQRDFGS---IDKAPEERERGITISTAHVEYQTKKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPALVVYLNKVDIADPEL----IELVELELRELLTEYNFPGDDIPIIKGSALKALDGDLEGEKS 187 The following BLAST results are available for this feature:
BLAST of FC930322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930322 ID=FC930322; Name=FC930322; organism=Citrus clementina; type=EST; length=741bpback to top |