FC930327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_BACHD (Superoxide dismutase [Mn] OS=Bacillus halodurans GN=sodA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.918e-28 Identity = 70/174 (40.23%), Postives = 97/174 (55.75%), Query Frame = 2 Query: 185 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAV-------EQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 LP LPY +ALEP I M +HH KHH YVT N A+ E+ +AL + ++ A++ NGGGH NH++FW+ L+P GG P L AI+ FGS + +K + A GSGW WL ++ +L + +T NQD + + T P+LG+DVWEHAYY Sbjct: 5 LPKLPYPANALEPHIDEATMNIHHGKHHNTYVTKLNAALEGHSALAEKSIEALVSDLDAVPENIRTAVRNNGGGHANHTLFWQILSP---NGGGAPTGELADAINAEFGSFDQFKEKFADAAANRFGSGWAWLVVND--GKLEITSTPNQDTPLMEGKT--PILGLDVWEHAYY 171
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_STRMU (Superoxide dismutase [Mn/Fe] OS=Streptococcus mutans GN=sodA PE=1 SV=3) HSP 1 Score: 125.561 bits (314), Expect = 2.505e-28 Identity = 73/175 (41.71%), Postives = 99/175 (56.57%), Query Frame = 2 Query: 179 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT--STVVQLQGAIK----FNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 + LPDLPY Y ALEP I E M LHH KHH YV N N A+E+ + ++ + V Q+ I+ NGGGH+NH++FW+ L+P + + AI+ FGS + +A GSGW WL +D E K L V +TANQD +++ L P+L +DVWEHAYY Sbjct: 3 ILLPDLPYAYDALEPYIDAETMTLHHDKHHATYVANANAALEKHPEIGENLEVLLADVEQIPADIRQSLINNGGGHLNHALFWELLSPEK----TKVTAEVAAAINEAFGSFDDFKAAFTAAATTRFGSGWAWLVVDKEGK-LEVTSTANQDTPISQG--LKPILALDVWEHAYY 170
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_AERPE (Superoxide dismutase [Mn/Fe] OS=Aeropyrum pernix GN=sod PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.505e-28 Identity = 70/167 (41.92%), Postives = 91/167 (54.49%), Query Frame = 2 Query: 185 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 LP LPY+Y+ALEP I EIM+LHHQKHH YV N A+E++ + L V + FN GH+ H+IFW N+AP +GGG P + I+ FG E SA ++G GW L D + L + + L+T LVP+L IDVWEHAYY Sbjct: 9 LPPLPYNYNALEPYIIEEIMKLHHQKHHNTYVKGANAALEKIEKHLKGEIQIDVRAVMRDFSFNYAGHIMHTIFWPNMAPPGKGGG-TPGGRVADLIEKQFGGFEKFKALFSAAAKTVEGVGWGVLAFDPLTEELRILQVEKHNVLMTAG--LVPILVIDVWEHAYY 172
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_STRAG (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae GN=sodA PE=3 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.271e-28 Identity = 73/175 (41.71%), Postives = 100/175 (57.14%), Query Frame = 2 Query: 179 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 + LPDLPY Y ALEP I E M LHH KHH YV N N A+E ++ + L + D S + + ++ A+ NGGGH+NH++FW+ ++P + L I+ FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYY Sbjct: 3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYY 170
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_STRA5 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype V GN=sodA PE=3 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.271e-28 Identity = 73/175 (41.71%), Postives = 100/175 (57.14%), Query Frame = 2 Query: 179 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 + LPDLPY Y ALEP I E M LHH KHH YV N N A+E ++ + L + D S + + ++ A+ NGGGH+NH++FW+ ++P + L I+ FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYY Sbjct: 3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYY 170
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_STRA3 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype III GN=sodA PE=3 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.271e-28 Identity = 73/175 (41.71%), Postives = 100/175 (57.14%), Query Frame = 2 Query: 179 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE---QLFQALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 + LPDLPY Y ALEP I E M LHH KHH YV N N A+E ++ + L + D S + + ++ A+ NGGGH+NH++FW+ ++P + L I+ FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYY Sbjct: 3 IILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQ----ELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYY 170
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_YEREN (Superoxide dismutase [Mn] OS=Yersinia enterocolitica GN=sodA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.272e-28 Identity = 76/183 (41.53%), Postives = 101/183 (55.19%), Query Frame = 2 Query: 182 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNK-----------AVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYY 685 +LP LPY Y ALEP + M++HH KHHQ YV N N +VE L + L+KV + + ++ N GGH NHS+FWK L G L AI+ FGS+++ +K A A GSGW WL L + K L V +TANQD PL+ +A + P++G+DVWEHAYY Sbjct: 4 SLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANTVLESFPELAKFSVEDLIKDLDKVP----AEKRTFMRNNAGGHANHSLFWKGLKL-----GTTLTGDLKAAIERDFGSVDSFKEKFEAAAATRFGSGWAWLVLKDDGK-LAVVSTANQDSPLMGEAVSGASGFPIVGLDVWEHAYY 176
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_STRP1 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M1 GN=sodA PE=3 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.272e-28 Identity = 70/176 (39.77%), Postives = 99/176 (56.25%), Query Frame = 2 Query: 179 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQ-------LFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 + LP+LPY Y ALEP E M LHH KHH YV N N A+E+ L + L V T ++ + NGGGH+NH++FW+ L+P + + AID FGS +A ++ +A GSGW WL ++ E +L + +TANQD +++ P+L +DVWEHAYY Sbjct: 3 IILPELPYAYDALEPQFDAETMTLHHDKHHATYVANTNAALEKHPEIGENLEELLADV-TKIPEDIRQTLINNGGGHLNHALFWELLSPEK----QDVTPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKE-GQLEITSTANQDTPISEGKK--PILALDVWEHAYY 170
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_SALTY (Superoxide dismutase [Mn] OS=Salmonella typhimurium GN=sodA PE=3 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 5.580e-28 Identity = 74/180 (41.11%), Postives = 97/180 (53.89%), Query Frame = 2 Query: 182 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL--------FQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYY 685 TLP LPY Y ALEP + M++HH KHHQ YV N N A+E L + + K+D + ++ N GGH NHS+FWK L G L AI+ FGS++ + A GSGW WL L + +L V +TANQD PL+ +A + P+LG+DVWEHAYY Sbjct: 4 TLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALENLPEFASLPVEELITKLD-QVPADKKTVLRNNAGGHANHSLFWKGLKK-----GTTLQGDLKAAIERDFGSVDNFKAEFEKAAATRFGSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYY 175
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_SALTI (Superoxide dismutase [Mn] OS=Salmonella typhi GN=sodA PE=3 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 5.580e-28 Identity = 74/180 (41.11%), Postives = 97/180 (53.89%), Query Frame = 2 Query: 182 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL--------FQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKA---PTLVPLLGIDVWEHAYY 685 TLP LPY Y ALEP + M++HH KHHQ YV N N A+E L + + K+D + ++ N GGH NHS+FWK L G L AI+ FGS++ + A GSGW WL L + +L V +TANQD PL+ +A + P+LG+DVWEHAYY Sbjct: 4 TLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALENLPEFADLPVEELITKLD-QVPADKKTVLRNNAGGHANHSLFWKGLKK-----GTTLQGDLKAAIERDFGSVDNFKAEFEKAAATRFGSGWAWLVLKGD--KLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYY 175 The following BLAST results are available for this feature:
BLAST of FC930327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 223
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930327 ID=FC930327; Name=FC930327; organism=Citrus clementina; type=EST; length=686bpback to top |