FC930327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_ACIAM (Superoxide dismutase [Fe] OS=Acidianus ambivalens GN=sod PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21 Identity = 62/175 (35.43%), Postives = 92/175 (52.57%), Query Frame = 2 Query: 170 LQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIK---FNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 L+ LP LPY+ ALEP IS EI+ +H+ HH+ YV N V+++ + L +S +QG ++ FN GH HS++W+N+AP +GGG+ P +G I+ +GS E + +L G+GW L + E L + T N L LL +D +EHAYY Sbjct: 7 LKKYELPPLPYNLDALEPYISKEIIDVHYNGHHRGYVNGANSFVDRVNKILKGEISSGQYDIQGLLRGLVFNINGHKLHSLYWQNMAPAGKGGGK-PGGVIGDLIEKQYGSFEKFKALFTEAANSLPGTGWTVLYYEVENGNLQIMTFENH--FQNHIAELPILLILDEFEHAYY 178
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_BUCBP (Superoxide dismutase [Mn] OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=sodA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.331e-21 Identity = 63/184 (34.24%), Postives = 93/184 (50.54%), Query Frame = 2 Query: 176 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNK----------AVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTK---APTLVPLLGIDVWEHAYY 685 T LP LPY Y++LEP + M +HH +HHQAY+ N N +E+L LN + + LQ N GGH+NHS+FWK L ++ +F S++ ++ + GSGW+WL + L + TT NQ+ PL+ K + +P+LG+D+WEHAYY Sbjct: 2 TYVLPSLPYSYNSLEPFFDEKTMIIHHTRHHQAYINNTNSILNGTHYENLLIEELISKLNILSIENKLALQN----NAGGHINHSLFWKWLKL-----NTILKDDFKIILEKNFKSVDFFKKQFEKIALSHFGSGWIWL-IKKYDNTLRIVTTVNQNTPLMGKEISGISGIPILGLDLWEHAYY 175
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_RICBR (Superoxide dismutase [Mn/Fe] OS=Rickettsia bellii (strain RML369-C) GN=sodB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.331e-21 Identity = 64/172 (37.21%), Postives = 86/172 (50.00%), Query Frame = 2 Query: 185 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV----QLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 LP+LPY+ + +P + E + HH KHH AYV N N ++ + L K + ++ Q Q FN V NH+ FW ++ P GGG+P L I+ FGS E ++ AE GSGW WL RL + TAN + A + PLL DVWEHAYY Sbjct: 16 LPNLPYEKESFKPHFTAETFEYHHGKHHNAYVQNLNNLLKDK-EELQKKNLEEIIDWSSQNQNIAIFNNAAQVWNHTFFWHSIKP--NGGGKPSGKILK-QINEDFGSFEEFCEQFKAEATGQFGSGWAWLVYHN--NRLQIVKTANAGTPI--ANGMQPLLACDVWEHAYY 179
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_MYCPH (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium phlei GN=sodA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.271e-21 Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = 2 Query: 254 HQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHA 679 H KHH YV N A+ +L +A D + + + F+ GGHVNH+I+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA Sbjct: 2 HSKHHATYVKGVNDAIAKLEEARANGDHGAIFLHEKNLAFHLGGHVNHTIWWKNLSP---HGGDKPTGDLAAAIDDQFGSFDNFRAQFTAAANGLQGSGWAVLGYDTLGDRLLTFQLYDQQANVPLG--IIPLLLVDMWEHA 138
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_PSEAE (Superoxide dismutase [Fe] OS=Pseudomonas aeruginosa GN=sodB PE=3 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 3.873e-21 Identity = 63/167 (37.72%), Postives = 82/167 (49.10%), Query Frame = 2 Query: 185 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 LP LPY+ +ALEP IS E ++ HH KHH YV N N + + K V G I N NH+ +W L+P GGG+P +L AI+ FGS + ++ + GSGW WL + + T +PL T T PLL DVWEHAYY Sbjct: 5 LPPLPYEKNALEPHISAETLEYHHDKHHNTYVVNLNNLIPGT-EFEGKSLEEIVKSSSGGIFNNAAQVWNHTFYWNCLSP--NGGGQPT-GALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGNPL-TSGDT--PLLTCDVWEHAYY 164
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_SULSO (Superoxide dismutase [Fe] OS=Sulfolobus solfataricus GN=sod PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21 Identity = 59/170 (34.71%), Postives = 90/170 (52.94%), Query Frame = 2 Query: 185 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIK---FNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 LP LPY ALEP IS +I+ +H+ HH+ YV N +E+L + + + +QG I+ FN GH H+++W+N+AP +GGG+ P +L I+ +GS + Q + +L G+GW L DTE L + T N + +L +D +EHAYY Sbjct: 12 LPPLPYKIDALEPYISKDIIDVHYNGHHKGYVNGANSLLERLEKVVKGDLQTGQYDIQGIIRGLTFNINGHKLHALYWENMAPSGKGGGK-PGGALADLINKQYGSFDRFKQVFTETANSLPGTGWAVLYYDTESGNLQIMTFENH--FQNHIAEIPIILILDEFEHAYY 178
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_RICCN (Superoxide dismutase [Mn/Fe] OS=Rickettsia conorii GN=sodB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21 Identity = 63/172 (36.63%), Postives = 84/172 (48.84%), Query Frame = 2 Query: 185 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV----QLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 LPDLPY+ + +P + E HH KHH YV N N ++ + L K D ++ Q A FN + NH+ FW ++ P +GGG+P L I+ FGS E ++ E GSGW WL RL + TAN + A + PLL DVWEHAYY Sbjct: 16 LPDLPYEKESFKPHFTLETFDYHHGKHHNTYVQNLNNLLKDK-EELQKKDLEEIIEWSSQNSNAAIFNNAAQIWNHTFFWHSIKP--QGGGKPSGKILE-QINKDFGSFEEFCEQFKQEAVGQFGSGWAWLIYHD--NRLQIIKTANAGTPI--AHGMKPLLACDVWEHAYY 179
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM2_HALVO (Superoxide dismutase [Mn] 2 OS=Halobacterium volcanii GN=sod2 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.127e-20 Identity = 62/169 (36.69%), Postives = 84/169 (49.70%), Query Frame = 2 Query: 185 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRL--VVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 L LPY+Y ALEP IS +++ HH HHQ YV +N E L + + + + NG GH+ H +FW+N++P GG+ P L I FGS EA K E AA +GW L D+ +L VV +Q L P+L +DVWEH+YY Sbjct: 5 LDPLPYEYDALEPHISEQVLTWHHDTHHQGYVNGWNADDETLAENREAGEFGSSAGAVRNVTHNGSGHILHDLFWQNMSP---EGGDEPEGLLAERIAEDFGSYEA--WKGEFEAAAGAAAGWALLVYDSFSNQLRNVVVDKHDQGALWGSH----PILALDVWEHSYY 164
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM1_HALVO (Superoxide dismutase [Mn] 1 OS=Halobacterium volcanii GN=sod1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.127e-20 Identity = 62/169 (36.69%), Postives = 84/169 (49.70%), Query Frame = 2 Query: 185 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRL--VVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 L LPY+Y ALEP IS +++ HH HHQ YV +N E L + + + + NG GH+ H +FW+N++P GG+ P L I FGS EA K E AA +GW L D+ +L VV +Q L P+L +DVWEH+YY Sbjct: 6 LDPLPYEYDALEPHISEQVLTWHHDTHHQGYVNGWNADDETLAENREAGEFGSSAGAVRNVTHNGSGHILHDLFWQNMSP---EGGDEPEGLLAERIAEDFGSYEA--WKGEFEAAAGAAAGWALLVYDSFSNQLRNVVVDKHDQGALWGSH----PILALDVWEHSYY 165
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_PSEPK (Superoxide dismutase [Fe] OS=Pseudomonas putida (strain KT2440) GN=sodB PE=3 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 63/167 (37.72%), Postives = 80/167 (47.90%), Query Frame = 2 Query: 185 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 LP LPY + AL+P IS E ++ HH KHH YV N N V + K V G I N NH+ +W L+P GGG+P +L AI+ FGS + ++ + GSGW WL + + T PL T T PLL DVWEHAYY Sbjct: 5 LPPLPYAHDALQPHISKETLEYHHDKHHNTYVVNLNNLVPGT-EFEGKTLEEIVKSSSGGIFNNAAQVWNHTFYWNCLSP--NGGGQPT-GALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGCPL-TSGDT--PLLTCDVWEHAYY 164 The following BLAST results are available for this feature:
BLAST of FC930327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 223
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930327 ID=FC930327; Name=FC930327; organism=Citrus clementina; type=EST; length=686bpback to top |